RNA–Protein interactions for RNA: ENST00000429527.6

NEDD1-203, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD1, Length 3,366 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-203ENST00000429527 ETNK1Q9HBU6 452 aa9.86□□□□□ -0.83
NEDD1-203ENST00000429527 GPAMQ9HCL2 828 aa9.86□□□□□ -0.83
NEDD1-203ENST00000429527 ZNF212Q9UDV6 495 aa9.86□□□□□ -0.83
NEDD1-203ENST00000429527 PLA2G4CQ9UP65 541 aa9.86□□□□□ -0.83
NEDD1-203ENST00000429527 MTO1Q9Y2Z2 717 aaKnown RBP9.86□□□□□ -0.83
NEDD1-203ENST00000429527 CDH23Q9H251 3354 aa9.86□□□□□ -0.83
NEDD1-203ENST00000429527 ANAPC1Q9H1A4 1944 aa9.86□□□□□ -0.83
NEDD1-203ENST00000429527 ZNF197O14709 1029 aa9.86□□□□□ -0.83
NEDD1-203ENST00000429527 DLDP09622 509 aaKnown RBP9.86□□□□□ -0.83
NEDD1-203ENST00000429527 LAMP2P13473 410 aa9.86□□□□□ -0.83
NEDD1-203ENST00000429527 PECAM1P16284 738 aaPredicted RBP9.86□□□□□ -0.83
NEDD1-203ENST00000429527 DDX6P26196 483 aaKnown RBP eCLIP9.86□□□□□ -0.83
NEDD1-203ENST00000429527 NSFP46459 744 aaKnown RBP9.86□□□□□ -0.83
NEDD1-203ENST00000429527 YWHAHQ04917 246 aaPredicted RBP9.86□□□□□ -0.83
NEDD1-203ENST00000429527 LRRC14Q15048 493 aa9.86□□□□□ -0.83
NEDD1-203ENST00000429527 P3H1Q32P28 736 aa9.86□□□□□ -0.83
NEDD1-203ENST00000429527 CENPUQ71F23 418 aa9.86□□□□□ -0.83
NEDD1-203ENST00000429527 SPPL2BQ8TCT7 592 aa9.86□□□□□ -0.83
NEDD1-203ENST00000429527 DYDC1Q8WWB3 177 aa9.86□□□□□ -0.83
NEDD1-203ENST00000429527 SMG7Q92540 1137 aaKnown RBP9.86□□□□□ -0.83
NEDD1-203ENST00000429527 DNASE1L2Q92874 299 aa9.86□□□□□ -0.83
NEDD1-203ENST00000429527 GATA6Q92908 595 aa9.86□□□□□ -0.83
NEDD1-203ENST00000429527 MYRFLQ96LU7 910 aa9.86□□□□□ -0.83
NEDD1-203ENST00000429527 MYADMQ96S97 322 aa9.86□□□□□ -0.83
NEDD1-203ENST00000429527 BTBD10Q9BSF8 475 aa9.86□□□□□ -0.83
NEDD1-203ENST00000429527 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.86□□□□□ -0.83
NEDD1-203ENST00000429527 STRIP2Q9ULQ0 834 aa9.86□□□□□ -0.83
NEDD1-203ENST00000429527 LRCH1Q9Y2L9 728 aa9.86□□□□□ -0.83
NEDD1-203ENST00000429527 CDY1Q9Y6F8 540 aa9.86□□□□□ -0.83
NEDD1-203ENST00000429527 CCDC22O60826 627 aa9.86□□□□□ -0.83
NEDD1-203ENST00000429527 SEC24AO95486 1093 aa9.86□□□□□ -0.83
NEDD1-203ENST00000429527 PTPN2P17706 415 aa9.86□□□□□ -0.83
NEDD1-203ENST00000429527 PAX7P23759 505 aa9.86□□□□□ -0.83
NEDD1-203ENST00000429527 FSHRP23945 695 aa9.86□□□□□ -0.83
NEDD1-203ENST00000429527 FCARP24071 287 aa9.86□□□□□ -0.83
NEDD1-203ENST00000429527 OR1D2P34982 312 aa9.86□□□□□ -0.83
NEDD1-203ENST00000429527 CAPRIN2Q6IMN6 1127 aaKnown RBP9.86□□□□□ -0.83
NEDD1-203ENST00000429527 ZNF449Q6P9G9 518 aa9.86□□□□□ -0.83
NEDD1-203ENST00000429527 SRRM1Q8IYB3 904 aaKnown RBP9.86□□□□□ -0.83
NEDD1-203ENST00000429527 SPATA17Q96L03 361 aa9.86□□□□□ -0.83
NEDD1-203ENST00000429527 SMC6Q96SB8 1091 aa9.86□□□□□ -0.83
NEDD1-203ENST00000429527 MAK16Q9BXY0 300 aaKnown RBP9.86□□□□□ -0.83
NEDD1-203ENST00000429527 FAM192AQ9GZU8 254 aa9.86□□□□□ -0.83
NEDD1-203ENST00000429527 PCIF1Q9H4Z3 704 aa9.86□□□□□ -0.83
NEDD1-203ENST00000429527 DENND2DQ9H6A0 471 aaPredicted RBP9.86□□□□□ -0.83
NEDD1-203ENST00000429527 APOBEC3GQ9HC16 384 aaKnown RBP9.86□□□□□ -0.83
NEDD1-203ENST00000429527 DNMT3BQ9UBC3 853 aaKnown RBP9.86□□□□□ -0.83
NEDD1-203ENST00000429527 CACNG4Q9UBN1 327 aa9.86□□□□□ -0.83
NEDD1-203ENST00000429527 EXOC1LA0A1B0GW35 172 aa9.85□□□□□ -0.83
NEDD1-203ENST00000429527 MTMR11A4FU01 709 aa9.85□□□□□ -0.83
NEDD1-203ENST00000429527 SRFP11831 508 aa9.85□□□□□ -0.83
NEDD1-203ENST00000429527 GLULP15104 373 aa9.85□□□□□ -0.83
NEDD1-203ENST00000429527 RPA3P35244 121 aaPredicted RBP9.85□□□□□ -0.83
NEDD1-203ENST00000429527 LHX1P48742 406 aa9.85□□□□□ -0.83
NEDD1-203ENST00000429527 CLCN5P51795 746 aa9.85□□□□□ -0.83
NEDD1-203ENST00000429527 CDK16Q00536 496 aa9.85□□□□□ -0.83
NEDD1-203ENST00000429527 TDGQ13569 410 aa9.85□□□□□ -0.83
NEDD1-203ENST00000429527 CTXN3Q4LDR2 81 aa9.85□□□□□ -0.83
NEDD1-203ENST00000429527 TIFABQ6ZNK6 161 aa9.85□□□□□ -0.83
NEDD1-203ENST00000429527 MFN1Q8IWA4 741 aa9.85□□□□□ -0.83
NEDD1-203ENST00000429527 ALDH16A1Q8IZ83 802 aa9.85□□□□□ -0.83
NEDD1-203ENST00000429527 ZNF687Q8N1G0 1237 aa9.85□□□□□ -0.83
NEDD1-203ENST00000429527 ATP11CQ8NB49 1132 aa9.85□□□□□ -0.83
NEDD1-203ENST00000429527 ERP27Q96DN0 273 aa9.85□□□□□ -0.83
NEDD1-203ENST00000429527 IRF2BPLQ9H1B7 796 aa9.85□□□□□ -0.83
NEDD1-203ENST00000429527 FANCMQ8IYD8 2048 aa9.85□□□□□ -0.83
NEDD1-203ENST00000429527 KPNA7A9QM74 516 aa9.85□□□□□ -0.83
NEDD1-203ENST00000429527 PPEF2O14830 753 aa9.85□□□□□ -0.83
NEDD1-203ENST00000429527 AP1G1O43747 822 aa9.85□□□□□ -0.83
NEDD1-203ENST00000429527 CAPNS1P04632 268 aa9.85□□□□□ -0.83
NEDD1-203ENST00000429527 HAPLN1P10915 354 aaPredicted RBP9.85□□□□□ -0.83
NEDD1-203ENST00000429527 PRKCHP24723 683 aa9.85□□□□□ -0.83
NEDD1-203ENST00000429527 PHBP35232 272 aa9.85□□□□□ -0.83
NEDD1-203ENST00000429527 AP1B1Q10567 949 aa9.85□□□□□ -0.83
NEDD1-203ENST00000429527 SLC44A1Q8WWI5 657 aa9.85□□□□□ -0.83
NEDD1-203ENST00000429527 PSMG2Q969U7 264 aa9.85□□□□□ -0.83
NEDD1-203ENST00000429527 B3GALT6Q96L58 329 aa9.85□□□□□ -0.83
NEDD1-203ENST00000429527 CADM1Q9BY67 442 aaKnown RBP9.85□□□□□ -0.83
NEDD1-203ENST00000429527 EPB41L1Q9H4G0 881 aa9.85□□□□□ -0.83
NEDD1-203ENST00000429527 MUTYHQ9UIF7 546 aa9.85□□□□□ -0.83
NEDD1-203ENST00000429527 DNPEPQ9ULA0 475 aa9.85□□□□□ -0.83
NEDD1-203ENST00000429527 TRIM33Q9UPN9 1127 aa9.85□□□□□ -0.83
NEDD1-203ENST00000429527 SNNO75324 88 aaPredicted RBP9.84□□□□□ -0.83
NEDD1-203ENST00000429527 ASS1P00966 412 aaKnown RBP9.84□□□□□ -0.83
NEDD1-203ENST00000429527 HLA-DRAP01903 254 aa9.84□□□□□ -0.83
NEDD1-203ENST00000429527 NEFHP12036 1026 aa9.84□□□□□ -0.83
NEDD1-203ENST00000429527 CALRP27797 417 aaKnown RBP9.84□□□□□ -0.83
NEDD1-203ENST00000429527 VHLP40337 213 aa9.84□□□□□ -0.83
NEDD1-203ENST00000429527 ACOT2P49753 483 aa9.84□□□□□ -0.83
NEDD1-203ENST00000429527 STARD6P59095 220 aa9.84□□□□□ -0.83
NEDD1-203ENST00000429527 XIAPP98170 497 aa9.84□□□□□ -0.83
NEDD1-203ENST00000429527 KCNJ11Q14654 390 aa9.84□□□□□ -0.83
NEDD1-203ENST00000429527 DUOXA2Q1HG44 320 aa9.84□□□□□ -0.83
NEDD1-203ENST00000429527 TEX44Q53QW1 395 aa9.84□□□□□ -0.83
NEDD1-203ENST00000429527 OVOS1Q6IE37 1185 aa9.84□□□□□ -0.83
NEDD1-203ENST00000429527 NLRP9Q7RTR0 991 aa9.84□□□□□ -0.83
NEDD1-203ENST00000429527 CPT1BQ92523 772 aa9.84□□□□□ -0.83
NEDD1-203ENST00000429527 APOPT1Q96IL0 206 aa9.84□□□□□ -0.83
NEDD1-203ENST00000429527 ANKRD36BP1Q96IX9 119 aa9.84□□□□□ -0.83
NEDD1-203ENST00000429527 FAM213AQ9BRX8 229 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms