RNA–Protein interactions for RNA: ENST00000427110.6

PTPRC-208, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 264 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-208ENST00000427110 UEVLDQ8IX04 471 aa2.72□□□□□ -1.97
PTPRC-208ENST00000427110 LINS1Q8NG48 757 aa2.72□□□□□ -1.97
PTPRC-208ENST00000427110 OSR1Q8TAX0 266 aaPredicted RBP2.72□□□□□ -1.97
PTPRC-208ENST00000427110 SLC2A12Q8TD20 617 aa2.72□□□□□ -1.97
PTPRC-208ENST00000427110 CLEC4CQ8WTT0 213 aa2.72□□□□□ -1.97
PTPRC-208ENST00000427110 ASB12Q8WXK4 309 aa2.72□□□□□ -1.97
PTPRC-208ENST00000427110 PIGKQ92643 395 aa2.72□□□□□ -1.97
PTPRC-208ENST00000427110 USP13Q92995 863 aaPredicted RBP2.72□□□□□ -1.97
PTPRC-208ENST00000427110 ARRDC3Q96B67 414 aa2.72□□□□□ -1.97
PTPRC-208ENST00000427110 SENP7Q9BQF6 1050 aa2.72□□□□□ -1.97
PTPRC-208ENST00000427110 EIF2AK1Q9BQI3 630 aaKnown RBP2.72□□□□□ -1.97
PTPRC-208ENST00000427110 ABHD14AQ9BUJ0 271 aa2.72□□□□□ -1.97
PTPRC-208ENST00000427110 SFXN1Q9H9B4 322 aa2.72□□□□□ -1.97
PTPRC-208ENST00000427110 TRNAU1APQ9NX07 287 aaKnown RBP2.72□□□□□ -1.97
PTPRC-208ENST00000427110 C9orf78Q9NZ63 289 aaPredicted RBP2.72□□□□□ -1.97
PTPRC-208ENST00000427110 SUFUQ9UMX1 484 aa2.72□□□□□ -1.97
PTPRC-208ENST00000427110 SLC8A2Q9UPR5 921 aa2.72□□□□□ -1.97
PTPRC-208ENST00000427110 COPG1Q9Y678 874 aaKnown RBP2.72□□□□□ -1.97
PTPRC-208ENST00000427110 SIRT4Q9Y6E7 314 aaPredicted RBP2.72□□□□□ -1.97
PTPRC-208ENST00000427110 SPATA31A1Q5TZJ5 1347 aa2.71□□□□□ -1.98
PTPRC-208ENST00000427110 FAM90A20PA6NIJ5 464 aa2.71□□□□□ -1.98
PTPRC-208ENST00000427110 GRM8O00222 908 aa2.71□□□□□ -1.98
PTPRC-208ENST00000427110 PRYO14603 147 aa2.71□□□□□ -1.98
PTPRC-208ENST00000427110 PPEF2O14830 753 aa2.71□□□□□ -1.98
PTPRC-208ENST00000427110 ANP32CO43423 234 aa2.71□□□□□ -1.98
PTPRC-208ENST00000427110 KAT7O95251 611 aa2.71□□□□□ -1.98
PTPRC-208ENST00000427110 AGR2O95994 175 aa2.71□□□□□ -1.98
PTPRC-208ENST00000427110 ENO1P06733 434 aaKnown RBP2.71□□□□□ -1.98
PTPRC-208ENST00000427110 CYP21A2P08686 494 aa2.71□□□□□ -1.98
PTPRC-208ENST00000427110 ALDOCP09972 364 aaKnown RBP2.71□□□□□ -1.98
PTPRC-208ENST00000427110 AKR1A1P14550 325 aa2.71□□□□□ -1.98
PTPRC-208ENST00000427110 ST6GAL1P15907 406 aa2.71□□□□□ -1.98
PTPRC-208ENST00000427110 ATF7P17544 494 aaPredicted RBP2.71□□□□□ -1.98
PTPRC-208ENST00000427110 XBP1P17861 261 aa2.71□□□□□ -1.98
PTPRC-208ENST00000427110 HOXD9P28356 352 aaPredicted RBP2.71□□□□□ -1.98
PTPRC-208ENST00000427110 PNPLA4P41247 253 aa2.71□□□□□ -1.98
PTPRC-208ENST00000427110 FOXL2P58012 376 aa2.71□□□□□ -1.98
PTPRC-208ENST00000427110 YPEL5P62699 121 aa2.71□□□□□ -1.98
PTPRC-208ENST00000427110 POU5F1BQ06416 359 aa2.71□□□□□ -1.98
PTPRC-208ENST00000427110 CDK18Q07002 472 aa2.71□□□□□ -1.98
PTPRC-208ENST00000427110 GOLGA8FQ08AF8 430 aa2.71□□□□□ -1.98
PTPRC-208ENST00000427110 MTA1Q13330 715 aa2.71□□□□□ -1.98
PTPRC-208ENST00000427110 DLGAP5Q15398 846 aa2.71□□□□□ -1.98
PTPRC-208ENST00000427110 GPR162Q16538 588 aa2.71□□□□□ -1.98
PTPRC-208ENST00000427110 FAM110CQ1W6H9 321 aa2.71□□□□□ -1.98
PTPRC-208ENST00000427110 ZNF484Q5JVG2 852 aa2.71□□□□□ -1.98
PTPRC-208ENST00000427110 CCDC70Q6NSX1 233 aa2.71□□□□□ -1.98
PTPRC-208ENST00000427110 KIAA1324Q6UXG2 1013 aaKnown RBP2.71□□□□□ -1.98
PTPRC-208ENST00000427110 MMS22LQ6ZRQ5 1243 aa2.71□□□□□ -1.98
PTPRC-208ENST00000427110 ZSCAN2Q7Z7L9 614 aaPredicted RBP2.71□□□□□ -1.98
PTPRC-208ENST00000427110 LAS2Q8IYD9 372 aa2.71□□□□□ -1.98
PTPRC-208ENST00000427110 ADGRF3Q8IZF5 1079 aa2.71□□□□□ -1.98
PTPRC-208ENST00000427110 PTGR2Q8N8N7 351 aaPredicted RBP2.71□□□□□ -1.98
PTPRC-208ENST00000427110 PNISRQ8TF01 805 aaKnown RBP2.71□□□□□ -1.98
PTPRC-208ENST00000427110 STAMQ92783 540 aa2.71□□□□□ -1.98
PTPRC-208ENST00000427110 KAT2BQ92831 832 aa2.71□□□□□ -1.98
PTPRC-208ENST00000427110 CELF1Q92879 486 aaKnown RBP2.71□□□□□ -1.98
PTPRC-208ENST00000427110 KTI12Q96EK9 354 aaPredicted RBP2.71□□□□□ -1.98
PTPRC-208ENST00000427110 FCRL4Q96PJ5 515 aa2.71□□□□□ -1.98
PTPRC-208ENST00000427110 FCRL5Q96RD9 977 aa2.71□□□□□ -1.98
PTPRC-208ENST00000427110 ARHGAP39Q9C0H5 1083 aa2.71□□□□□ -1.98
PTPRC-208ENST00000427110 TWSG1Q9GZX9 223 aa2.71□□□□□ -1.98
PTPRC-208ENST00000427110 ABHD16BQ9H3Z7 469 aa2.71□□□□□ -1.98
PTPRC-208ENST00000427110 MTPAPQ9NVV4 582 aaKnown RBP eCLIP2.71□□□□□ -1.98
PTPRC-208ENST00000427110 RCE1Q9Y256 329 aa2.71□□□□□ -1.98
PTPRC-208ENST00000427110 DNAJC16Q9Y2G8 782 aa2.71□□□□□ -1.98
PTPRC-208ENST00000427110 CYP3A7-CYP3A51PA0A087WV96 503 aa2.7□□□□□ -1.98
PTPRC-208ENST00000427110 CYP2D7A0A087X1C5 515 aa2.7□□□□□ -1.98
PTPRC-208ENST00000427110 VWA3AA6NCI4 1184 aa2.7□□□□□ -1.98
PTPRC-208ENST00000427110 E5RJQ4 531 aa2.7□□□□□ -1.98
PTPRC-208ENST00000427110 PEX12O00623 359 aa2.7□□□□□ -1.98
PTPRC-208ENST00000427110 DSCR3O14972 297 aa2.7□□□□□ -1.98
PTPRC-208ENST00000427110 SYN3O14994 580 aa2.7□□□□□ -1.98
PTPRC-208ENST00000427110 KLK10O43240 276 aa2.7□□□□□ -1.98
PTPRC-208ENST00000427110 SH3BP5O60239 455 aa2.7□□□□□ -1.98
PTPRC-208ENST00000427110 CCNT1O60563 726 aaKnown RBP2.7□□□□□ -1.98
PTPRC-208ENST00000427110 MOSPD3O75425 235 aa2.7□□□□□ -1.98
PTPRC-208ENST00000427110 CNTN5O94779 1100 aa2.7□□□□□ -1.98
PTPRC-208ENST00000427110 BMP15O95972 392 aa2.7□□□□□ -1.98
PTPRC-208ENST00000427110 IGKV2-30P06310 120 aa2.7□□□□□ -1.98
PTPRC-208ENST00000427110 CYP3A4P08684 503 aa2.7□□□□□ -1.98
PTPRC-208ENST00000427110 CSF1P09603 554 aa2.7□□□□□ -1.98
PTPRC-208ENST00000427110 WEE2P0C1S8 567 aa2.7□□□□□ -1.98
PTPRC-208ENST00000427110 LYL1P12980 280 aa2.7□□□□□ -1.98
PTPRC-208ENST00000427110 ACP5P13686 325 aa2.7□□□□□ -1.98
PTPRC-208ENST00000427110 CHN1P15882 459 aa2.7□□□□□ -1.98
PTPRC-208ENST00000427110 CYP3A7P24462 503 aa2.7□□□□□ -1.98
PTPRC-208ENST00000427110 GSTM2P28161 218 aa2.7□□□□□ -1.98
PTPRC-208ENST00000427110 B4GALNT1Q00973 533 aa2.7□□□□□ -1.98
PTPRC-208ENST00000427110 ZNF91Q05481 1191 aa2.7□□□□□ -1.98
PTPRC-208ENST00000427110 DMWDQ09019 674 aa2.7□□□□□ -1.98
PTPRC-208ENST00000427110 TRPC3Q13507 836 aa2.7□□□□□ -1.98
PTPRC-208ENST00000427110 ALKBH1Q13686 389 aaKnown RBP2.7□□□□□ -1.98
PTPRC-208ENST00000427110 EFR3AQ14156 821 aa2.7□□□□□ -1.98
PTPRC-208ENST00000427110 DCTN1Q14203 1278 aa2.7□□□□□ -1.98
PTPRC-208ENST00000427110 GXYLT1Q4G148 440 aa2.7□□□□□ -1.98
PTPRC-208ENST00000427110 ARL13AQ5H913 290 aaPredicted RBP2.7□□□□□ -1.98
PTPRC-208ENST00000427110 ATG16L1Q676U5 607 aa2.7□□□□□ -1.98
PTPRC-208ENST00000427110 SHC4Q6S5L8 630 aa2.7□□□□□ -1.98
PTPRC-208ENST00000427110 RASGRP2Q7LDG7 609 aa2.7□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms