RNA–Protein interactions for RNA: ENST00000425436.7

SHOX2-202, Transcript of short stature homeobox 2, humanhuman

TSL 5 BASIC

Gene SHOX2, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-202ENST00000425436 RAB6CQ53S08 254 aa16.12■□□□□ 0.17
SHOX2-202ENST00000425436 SH3PXD2AQ5TCZ1 1133 aa16.12■□□□□ 0.17
SHOX2-202ENST00000425436 TMC3Q7Z5M5 1100 aa16.12■□□□□ 0.17
SHOX2-202ENST00000425436 DENND1CQ8IV53 801 aa16.12■□□□□ 0.17
SHOX2-202ENST00000425436 BBS7Q8IWZ6 715 aa16.12■□□□□ 0.17
SHOX2-202ENST00000425436 KCTD6Q8NC69 237 aa16.12■□□□□ 0.17
SHOX2-202ENST00000425436 SNF8Q96H20 258 aa16.12■□□□□ 0.17
SHOX2-202ENST00000425436 ZIM3Q96PE6 472 aa16.12■□□□□ 0.17
SHOX2-202ENST00000425436 TBCBQ99426 244 aa16.12■□□□□ 0.17
SHOX2-202ENST00000425436 NPY6RQ99463 290 aa16.12■□□□□ 0.17
SHOX2-202ENST00000425436 FOXP3Q9BZS1 431 aa16.12■□□□□ 0.17
SHOX2-202ENST00000425436 RAB6CQ9H0N0 254 aa16.12■□□□□ 0.17
SHOX2-202ENST00000425436 EBF3Q9H4W6 596 aa16.12■□□□□ 0.17
SHOX2-202ENST00000425436 DDIT4Q9NX09 232 aa16.12■□□□□ 0.17
SHOX2-202ENST00000425436 PSD3Q9NYI0 1048 aa16.12■□□□□ 0.17
SHOX2-202ENST00000425436 GRHL1Q9NZI5 618 aa16.12■□□□□ 0.17
SHOX2-202ENST00000425436 VPS18Q9P253 973 aa16.12■□□□□ 0.17
SHOX2-202ENST00000425436 HBS1LQ9Y450 684 aaKnown RBP16.12■□□□□ 0.17
SHOX2-202ENST00000425436 MYOFQ9NZM1 2061 aa16.12■□□□□ 0.17
SHOX2-202ENST00000425436 NCOR1O75376 2440 aa16.12■□□□□ 0.17
SHOX2-202ENST00000425436 KIF26AQ9ULI4 1882 aaPredicted RBP16.11■□□□□ 0.17
SHOX2-202ENST00000425436 E2F8A0AVK6 867 aa16.11■□□□□ 0.17
SHOX2-202ENST00000425436 PRPSAP2O60256 369 aa16.11■□□□□ 0.17
SHOX2-202ENST00000425436 IGLV3-25P01717 112 aa16.11■□□□□ 0.17
SHOX2-202ENST00000425436 ARSAP15289 507 aa16.11■□□□□ 0.17
SHOX2-202ENST00000425436 KDELR1P24390 212 aa16.11■□□□□ 0.17
SHOX2-202ENST00000425436 MIPP30301 263 aa16.11■□□□□ 0.17
SHOX2-202ENST00000425436 HSD17B3P37058 310 aa16.11■□□□□ 0.17
SHOX2-202ENST00000425436 RPL21P46778 160 aaKnown RBP16.11■□□□□ 0.17
SHOX2-202ENST00000425436 KCNJ1P48048 391 aa16.11■□□□□ 0.17
SHOX2-202ENST00000425436 ATXN1P54253 815 aaKnown RBP16.11■□□□□ 0.17
SHOX2-202ENST00000425436 BYSLQ13895 437 aaKnown RBP16.11■□□□□ 0.17
SHOX2-202ENST00000425436 PDK2Q15119 407 aa16.11■□□□□ 0.17
SHOX2-202ENST00000425436 CDO1Q16878 200 aa16.11■□□□□ 0.17
SHOX2-202ENST00000425436 SLC25A52Q3SY17 297 aa16.11■□□□□ 0.17
SHOX2-202ENST00000425436 ATP13A4Q4VNC1 1196 aa16.11■□□□□ 0.17
SHOX2-202ENST00000425436 ZC3H12AQ5D1E8 599 aaKnown RBP16.11■□□□□ 0.17
SHOX2-202ENST00000425436 IER5LQ5T953 404 aa16.11■□□□□ 0.17
SHOX2-202ENST00000425436 OTUD1Q5VV17 481 aaPredicted RBP16.11■□□□□ 0.17
SHOX2-202ENST00000425436 DAB2IPQ5VWQ8 1189 aa16.11■□□□□ 0.17
SHOX2-202ENST00000425436 HTR3DQ70Z44 454 aa16.11■□□□□ 0.17
SHOX2-202ENST00000425436 OSCP1Q8WVF1 389 aa16.11■□□□□ 0.17
SHOX2-202ENST00000425436 TEKT4Q8WW24 435 aa16.11■□□□□ 0.17
SHOX2-202ENST00000425436 RAPGEF5Q92565 580 aa16.11■□□□□ 0.17
SHOX2-202ENST00000425436 CCDC114Q96M63 670 aa16.11■□□□□ 0.17
SHOX2-202ENST00000425436 SERPINB11Q96P15 392 aa16.11■□□□□ 0.17
SHOX2-202ENST00000425436 FAM83CQ9BQN1 747 aa16.11■□□□□ 0.17
SHOX2-202ENST00000425436 GTSE1Q9NYZ3 720 aa16.11■□□□□ 0.17
SHOX2-202ENST00000425436 ASIC3Q9UHC3 531 aa16.11■□□□□ 0.17
SHOX2-202ENST00000425436 LSM7Q9UK45 103 aaKnown RBP16.11■□□□□ 0.17
SHOX2-202ENST00000425436 STAP1Q9ULZ2 295 aa16.11■□□□□ 0.17
SHOX2-202ENST00000425436 TICRRQ7Z2Z1 1910 aa16.1■□□□□ 0.17
SHOX2-202ENST00000425436 CHADO15335 359 aa16.1■□□□□ 0.17
SHOX2-202ENST00000425436 IRAK2O43187 625 aa16.1■□□□□ 0.17
SHOX2-202ENST00000425436 LIASO43766 372 aa16.1■□□□□ 0.17
SHOX2-202ENST00000425436 SRFP11831 508 aa16.1■□□□□ 0.17
SHOX2-202ENST00000425436 RDXP35241 583 aaKnown RBP16.1■□□□□ 0.17
SHOX2-202ENST00000425436 PTPN9P43378 593 aa16.1■□□□□ 0.17
SHOX2-202ENST00000425436 IFNAR2P48551 515 aa16.1■□□□□ 0.17
SHOX2-202ENST00000425436 HARS2P49590 506 aaKnown RBP16.1■□□□□ 0.17
SHOX2-202ENST00000425436 EIF4EBP2Q13542 120 aaPredicted RBP16.1■□□□□ 0.17
SHOX2-202ENST00000425436 SNX1Q13596 522 aa16.1■□□□□ 0.17
SHOX2-202ENST00000425436 TFDP2Q14188 446 aa16.1■□□□□ 0.17
SHOX2-202ENST00000425436 ZDHHC24Q6UX98 284 aa16.1■□□□□ 0.17
SHOX2-202ENST00000425436 BBS12Q6ZW61 710 aa16.1■□□□□ 0.17
SHOX2-202ENST00000425436 ARFGAP1Q8N6T3 406 aa16.1■□□□□ 0.17
SHOX2-202ENST00000425436 NKD2Q969F2 451 aaPredicted RBP16.1■□□□□ 0.17
SHOX2-202ENST00000425436 RNF34Q969K3 372 aa16.1■□□□□ 0.17
SHOX2-202ENST00000425436 NT5C3BQ969T7 300 aa16.1■□□□□ 0.17
SHOX2-202ENST00000425436 PLD4Q96BZ4 506 aa16.1■□□□□ 0.17
SHOX2-202ENST00000425436 FCRL2Q96LA5 508 aaPredicted RBP16.1■□□□□ 0.17
SHOX2-202ENST00000425436 MAK16Q9BXY0 300 aaKnown RBP16.1■□□□□ 0.17
SHOX2-202ENST00000425436 TXLNGYQ9BZA5 131 aa16.1■□□□□ 0.17
SHOX2-202ENST00000425436 NEUROG2Q9H2A3 272 aa16.1■□□□□ 0.17
SHOX2-202ENST00000425436 ZWILCHQ9H900 591 aa16.1■□□□□ 0.17
SHOX2-202ENST00000425436 PIGVQ9NUD9 493 aa16.1■□□□□ 0.17
SHOX2-202ENST00000425436 ADAM21Q9UKJ8 722 aa16.1■□□□□ 0.17
SHOX2-202ENST00000425436 AGO1Q9UL18 857 aaKnown RBP16.1■□□□□ 0.17
SHOX2-202ENST00000425436 DUSP12Q9UNI6 340 aa16.1■□□□□ 0.17
SHOX2-202ENST00000425436 TLR6Q9Y2C9 796 aa16.1■□□□□ 0.17
SHOX2-202ENST00000425436 OTOL1A6NHN0 477 aaPredicted RBP16.09■□□□□ 0.17
SHOX2-202ENST00000425436 C3orf70A6NLC5 250 aaPredicted RBP16.09■□□□□ 0.17
SHOX2-202ENST00000425436 ZNF487B1APH4 448 aa16.09■□□□□ 0.17
SHOX2-202ENST00000425436 PI4K2BG5E9Z4 385 aa16.09■□□□□ 0.17
SHOX2-202ENST00000425436 MOCS2O96007 188 aaPredicted RBP16.09■□□□□ 0.17
SHOX2-202ENST00000425436 IGLV3-27P01718 113 aa16.09■□□□□ 0.17
SHOX2-202ENST00000425436 ITGAVP06756 1048 aa16.09■□□□□ 0.17
SHOX2-202ENST00000425436 ADCY8P40145 1251 aa16.09■□□□□ 0.17
SHOX2-202ENST00000425436 KPNA1P52294 538 aaPredicted RBP16.09■□□□□ 0.17
SHOX2-202ENST00000425436 PMS2P54278 862 aa16.09■□□□□ 0.17
SHOX2-202ENST00000425436 DEUP1Q05D60 604 aa16.09■□□□□ 0.17
SHOX2-202ENST00000425436 EML3Q32P44 896 aa16.09■□□□□ 0.17
SHOX2-202ENST00000425436 KAZNQ674X7 775 aa16.09■□□□□ 0.17
SHOX2-202ENST00000425436 Q6ZNB5 142 aa16.09■□□□□ 0.17
SHOX2-202ENST00000425436 GSTA5Q7RTV2 222 aa16.09■□□□□ 0.17
SHOX2-202ENST00000425436 ADGRG2Q8IZP9 1017 aa16.09■□□□□ 0.17
SHOX2-202ENST00000425436 FBXO25Q8TCJ0 367 aa16.09■□□□□ 0.17
SHOX2-202ENST00000425436 UBLCP1Q8WVY7 318 aaPredicted RBP16.09■□□□□ 0.17
SHOX2-202ENST00000425436 IRF7Q92985 503 aa16.09■□□□□ 0.17
SHOX2-202ENST00000425436 SLC39A13Q96H72 371 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms