RNA–Protein interactions for RNA: ENST00000425428.6

CD44-207, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best)

Gene CD44, Length 1,768 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-207ENST00000425428 NUP205Q92621 2012 aa10.38□□□□□ -0.75
CD44-207ENST00000425428 IGLV3-10A0A075B6K4 115 aa10.38□□□□□ -0.75
CD44-207ENST00000425428 hCG_1818297A0A087WSY0 165 aa10.38□□□□□ -0.75
CD44-207ENST00000425428 ANHXE9PGG2 379 aa10.38□□□□□ -0.75
CD44-207ENST00000425428 APOC4-APOC2K7ER74 178 aa10.38□□□□□ -0.75
CD44-207ENST00000425428 KRIT1O00522 736 aa10.38□□□□□ -0.75
CD44-207ENST00000425428 STK10O94804 968 aaKnown RBP10.38□□□□□ -0.75
CD44-207ENST00000425428 LUC7L3O95232 432 aaKnown RBP10.38□□□□□ -0.75
CD44-207ENST00000425428 APOC2P02655 101 aa10.38□□□□□ -0.75
CD44-207ENST00000425428 TYRP14679 529 aa10.38□□□□□ -0.75
CD44-207ENST00000425428 SLC6A4P31645 630 aa10.38□□□□□ -0.75
CD44-207ENST00000425428 GGCXP38435 758 aa10.38□□□□□ -0.75
CD44-207ENST00000425428 NDST2P52849 883 aa10.38□□□□□ -0.75
CD44-207ENST00000425428 VCPP55072 806 aaKnown RBP10.38□□□□□ -0.75
CD44-207ENST00000425428 ZXDBP98169 803 aa10.38□□□□□ -0.75
CD44-207ENST00000425428 TFF2Q03403 129 aa10.38□□□□□ -0.75
CD44-207ENST00000425428 MMRN1Q13201 1228 aa10.38□□□□□ -0.75
CD44-207ENST00000425428 SEMA3BQ13214 749 aa10.38□□□□□ -0.75
CD44-207ENST00000425428 POLD3Q15054 466 aaPredicted RBP10.38□□□□□ -0.75
CD44-207ENST00000425428 WHAMMP3Q1A5X7 153 aa10.38□□□□□ -0.75
CD44-207ENST00000425428 EML3Q32P44 896 aa10.38□□□□□ -0.75
CD44-207ENST00000425428 PARP15Q460N3 678 aa10.38□□□□□ -0.75
CD44-207ENST00000425428 LY6G5CQ5SRR4 150 aa10.38□□□□□ -0.75
CD44-207ENST00000425428 TIGD7Q6NT04 549 aaPredicted RBP10.38□□□□□ -0.75
CD44-207ENST00000425428 BBS12Q6ZW61 710 aa10.38□□□□□ -0.75
CD44-207ENST00000425428 CYP4V2Q6ZWL3 525 aaPredicted RBP10.38□□□□□ -0.75
CD44-207ENST00000425428 TFAP2DQ7Z6R9 452 aa10.38□□□□□ -0.75
CD44-207ENST00000425428 SLC13A5Q86YT5 568 aaPredicted RBP10.38□□□□□ -0.75
CD44-207ENST00000425428 CFAP52Q8N1V2 620 aa10.38□□□□□ -0.75
CD44-207ENST00000425428 BBS5Q8N3I7 341 aa10.38□□□□□ -0.75
CD44-207ENST00000425428 CEP112Q8N8E3 955 aa10.38□□□□□ -0.75
CD44-207ENST00000425428 MAGEH1Q9H213 219 aa10.38□□□□□ -0.75
CD44-207ENST00000425428 EBF3Q9H4W6 596 aa10.38□□□□□ -0.75
CD44-207ENST00000425428 ECT2Q9H8V3 914 aa10.38□□□□□ -0.75
CD44-207ENST00000425428 KCNK12Q9HB15 430 aa10.38□□□□□ -0.75
CD44-207ENST00000425428 ARHGEF4Q9NR80 690 aa10.38□□□□□ -0.75
CD44-207ENST00000425428 MPP6Q9NZW5 540 aa10.38□□□□□ -0.75
CD44-207ENST00000425428 CDC23Q9UJX2 597 aa10.38□□□□□ -0.75
CD44-207ENST00000425428 SLC8A2Q9UPR5 921 aa10.38□□□□□ -0.75
CD44-207ENST00000425428 SNX10Q9Y5X0 201 aa10.38□□□□□ -0.75
CD44-207ENST00000425428 WASH4PA8MWX3 477 aa10.37□□□□□ -0.75
CD44-207ENST00000425428 FAM72CH0Y354 149 aa10.37□□□□□ -0.75
CD44-207ENST00000425428 DFFAO00273 331 aa10.37□□□□□ -0.75
CD44-207ENST00000425428 NRG2O14511 850 aaPredicted RBP10.37□□□□□ -0.75
CD44-207ENST00000425428 CD48P09326 243 aa10.37□□□□□ -0.75
CD44-207ENST00000425428 KRT10P13645 584 aa10.37□□□□□ -0.75
CD44-207ENST00000425428 IL9P15248 144 aa10.37□□□□□ -0.75
CD44-207ENST00000425428 FCARP24071 287 aa10.37□□□□□ -0.75
CD44-207ENST00000425428 HOXC13P31276 330 aa10.37□□□□□ -0.75
CD44-207ENST00000425428 NNMTP40261 264 aa10.37□□□□□ -0.75
CD44-207ENST00000425428 ARSEP51690 589 aa10.37□□□□□ -0.75
CD44-207ENST00000425428 GEMIN4P57678 1058 aaKnown RBP10.37□□□□□ -0.75
CD44-207ENST00000425428 RPS24P62847 133 aaKnown RBP10.37□□□□□ -0.75
CD44-207ENST00000425428 TDGQ13569 410 aa10.37□□□□□ -0.75
CD44-207ENST00000425428 DPYSQ14117 519 aa10.37□□□□□ -0.75
CD44-207ENST00000425428 DMC1Q14565 340 aa10.37□□□□□ -0.75
CD44-207ENST00000425428 C5orf22Q49AR2 442 aa10.37□□□□□ -0.75
CD44-207ENST00000425428 FAM72AQ5TYM5 149 aa10.37□□□□□ -0.75
CD44-207ENST00000425428 RNF219Q5W0B1 726 aaPredicted RBP10.37□□□□□ -0.75
CD44-207ENST00000425428 IL31Q6EBC2 164 aa10.37□□□□□ -0.75
CD44-207ENST00000425428 FAM72DQ6L9T8 149 aa10.37□□□□□ -0.75
CD44-207ENST00000425428 C14orf80Q86SX3 495 aa10.37□□□□□ -0.75
CD44-207ENST00000425428 FAM72BQ86X60 149 aa10.37□□□□□ -0.75
CD44-207ENST00000425428 ATPAF2Q8N5M1 289 aa10.37□□□□□ -0.75
CD44-207ENST00000425428 CCNYQ8ND76 341 aa10.37□□□□□ -0.75
CD44-207ENST00000425428 CCDC26Q8TAB7 109 aa10.37□□□□□ -0.75
CD44-207ENST00000425428 UCMAQ8WVF2 138 aa10.37□□□□□ -0.75
CD44-207ENST00000425428 DNASE1L2Q92874 299 aa10.37□□□□□ -0.75
CD44-207ENST00000425428 IGSF8Q969P0 613 aa10.37□□□□□ -0.75
CD44-207ENST00000425428 FAF2Q96CS3 445 aa10.37□□□□□ -0.75
CD44-207ENST00000425428 MSANTD3Q96H12 275 aa10.37□□□□□ -0.75
CD44-207ENST00000425428 LINC00597Q9H2U6 94 aa10.37□□□□□ -0.75
CD44-207ENST00000425428 C8orf33Q9H7E9 229 aaPredicted RBP10.37□□□□□ -0.75
CD44-207ENST00000425428 ANLNQ9NQW6 1124 aa10.37□□□□□ -0.75
CD44-207ENST00000425428 MARK1Q9P0L2 795 aa10.37□□□□□ -0.75
CD44-207ENST00000425428 DEC1Q9P2X7 70 aa10.37□□□□□ -0.75
CD44-207ENST00000425428 TTC7AQ9ULT0 858 aaPredicted RBP10.37□□□□□ -0.75
CD44-207ENST00000425428 ILVBLA1L0T0 632 aa10.37□□□□□ -0.75
CD44-207ENST00000425428 ZSCAN5CA6NGD5 496 aaPredicted RBP10.37□□□□□ -0.75
CD44-207ENST00000425428 H7C0C1 242 aa10.37□□□□□ -0.75
CD44-207ENST00000425428 CCDC188H7C350 402 aa10.37□□□□□ -0.75
CD44-207ENST00000425428 HOXC11O43248 304 aaPredicted RBP10.37□□□□□ -0.75
CD44-207ENST00000425428 MTSS1O43312 755 aa10.37□□□□□ -0.75
CD44-207ENST00000425428 ATP5OP48047 213 aa10.37□□□□□ -0.75
CD44-207ENST00000425428 DGKGP49619 791 aa10.37□□□□□ -0.75
CD44-207ENST00000425428 SULT2A1Q06520 285 aa10.37□□□□□ -0.75
CD44-207ENST00000425428 PAFAH1B3Q15102 231 aaKnown RBP10.37□□□□□ -0.75
CD44-207ENST00000425428 LLGL1Q15334 1064 aa10.37□□□□□ -0.75
CD44-207ENST00000425428 MANEALQ5VSG8 457 aa10.37□□□□□ -0.75
CD44-207ENST00000425428 SLC9A4Q6AI14 798 aa10.37□□□□□ -0.75
CD44-207ENST00000425428 TRIM68Q6AZZ1 485 aa10.37□□□□□ -0.75
CD44-207ENST00000425428 GRAMD4Q6IC98 578 aa10.37□□□□□ -0.75
CD44-207ENST00000425428 GSTA5Q7RTV2 222 aa10.37□□□□□ -0.75
CD44-207ENST00000425428 ADAT2Q7Z6V5 191 aaKnown RBP10.37□□□□□ -0.75
CD44-207ENST00000425428 TMEM25Q86YD3 366 aa10.37□□□□□ -0.75
CD44-207ENST00000425428 SUGP1Q8IWZ8 645 aaKnown RBP10.37□□□□□ -0.75
CD44-207ENST00000425428 RASGEF1CQ8N431 466 aa10.37□□□□□ -0.75
CD44-207ENST00000425428 PCDH19Q8TAB3 1148 aa10.37□□□□□ -0.75
CD44-207ENST00000425428 FIBINQ8TAL6 211 aa10.37□□□□□ -0.75
CD44-207ENST00000425428 GRK7Q8WTQ7 553 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms