RNA–Protein interactions for RNA: ENST00000423161.3

SREBF1-206, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 1,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-206ENST00000423161 SNX11Q9Y5W9 270 aa19.11■□□□□ 0.65
SREBF1-206ENST00000423161 FAM221BA6H8Z2 402 aa19.1■□□□□ 0.65
SREBF1-206ENST00000423161 FAM47DPA6NHR8 397 aa19.1■□□□□ 0.65
SREBF1-206ENST00000423161 TTC34A8MYJ7 566 aa19.1■□□□□ 0.65
SREBF1-206ENST00000423161 F5H5T6 163 aa19.1■□□□□ 0.65
SREBF1-206ENST00000423161 MID1O15344 667 aa19.1■□□□□ 0.65
SREBF1-206ENST00000423161 ECT2LQ008S8 904 aa19.1■□□□□ 0.65
SREBF1-206ENST00000423161 TAF5Q15542 800 aa19.1■□□□□ 0.65
SREBF1-206ENST00000423161 CST6Q15828 149 aa19.1■□□□□ 0.65
SREBF1-206ENST00000423161 EXOC3L4Q17RC7 722 aa19.1■□□□□ 0.65
SREBF1-206ENST00000423161 KIF19Q2TAC6 998 aa19.1■□□□□ 0.65
SREBF1-206ENST00000423161 C9orf64Q5T6V5 341 aa19.1■□□□□ 0.65
SREBF1-206ENST00000423161 RNF219Q5W0B1 726 aaPredicted RBP19.1■□□□□ 0.65
SREBF1-206ENST00000423161 KIAA0895LQ68EN5 471 aa19.1■□□□□ 0.65
SREBF1-206ENST00000423161 LAYNQ6UX15 382 aa19.1■□□□□ 0.65
SREBF1-206ENST00000423161 GLRX5Q86SX6 157 aa19.1■□□□□ 0.65
SREBF1-206ENST00000423161 APCDD1Q8J025 514 aa19.1■□□□□ 0.65
SREBF1-206ENST00000423161 ADAMTS14Q8WXS8 1223 aa19.1■□□□□ 0.65
SREBF1-206ENST00000423161 SHC3Q92529 594 aa19.1■□□□□ 0.65
SREBF1-206ENST00000423161 CPXM1Q96SM3 734 aa19.1■□□□□ 0.65
SREBF1-206ENST00000423161 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.1■□□□□ 0.651e-6■■■■□ 25.1
SREBF1-206ENST00000423161 SERGEFQ9UGK8 458 aa19.1■□□□□ 0.65
SREBF1-206ENST00000423161 SLC12A6Q9UHW9 1150 aa19.1■□□□□ 0.65
SREBF1-206ENST00000423161 ANKRD6Q9Y2G4 727 aa19.1■□□□□ 0.65
SREBF1-206ENST00000423161 PCDHGB2Q9Y5G2 931 aa19.1■□□□□ 0.65
SREBF1-206ENST00000423161 ASPMQ8IZT6 3477 aa19.09■□□□□ 0.65
SREBF1-206ENST00000423161 SYNJ2BP-COX16A0A087WUM0 186 aa19.09■□□□□ 0.65
SREBF1-206ENST00000423161 EDDM13A0A1B0GTR0 161 aa19.09■□□□□ 0.65
SREBF1-206ENST00000423161 A0A1W2PP55 124 aa19.09■□□□□ 0.65
SREBF1-206ENST00000423161 TARSL2A2RTX5 802 aaKnown RBP19.09■□□□□ 0.65
SREBF1-206ENST00000423161 KCNU1A8MYU2 1149 aa19.09■□□□□ 0.65
SREBF1-206ENST00000423161 FLRT2O43155 660 aa19.09■□□□□ 0.65
SREBF1-206ENST00000423161 IGHV4-34P06331 123 aa19.09■□□□□ 0.65
SREBF1-206ENST00000423161 UBE2HP62256 183 aa19.09■□□□□ 0.65
SREBF1-206ENST00000423161 CDK17Q00537 523 aa19.09■□□□□ 0.65
SREBF1-206ENST00000423161 SFSWAPQ12872 951 aaKnown RBP19.09■□□□□ 0.65
SREBF1-206ENST00000423161 EIF4EBP2Q13542 120 aaPredicted RBP19.09■□□□□ 0.65
SREBF1-206ENST00000423161 ADAT2Q7Z6V5 191 aaKnown RBP19.09■□□□□ 0.65
SREBF1-206ENST00000423161 CIR1Q86X95 450 aaPredicted RBP19.09■□□□□ 0.65
SREBF1-206ENST00000423161 PASD1Q8IV76 773 aa19.09■□□□□ 0.65
SREBF1-206ENST00000423161 MMAAQ8IVH4 418 aaKnown RBP19.09■□□□□ 0.65
SREBF1-206ENST00000423161 DEFB106AQ8N104 65 aa19.09■□□□□ 0.65
SREBF1-206ENST00000423161 RPL10LQ96L21 214 aaKnown RBP19.09■□□□□ 0.65
SREBF1-206ENST00000423161 DDIT4Q9NX09 232 aa19.09■□□□□ 0.65
SREBF1-206ENST00000423161 COX16Q9P0S2 106 aa19.09■□□□□ 0.65
SREBF1-206ENST00000423161 SLCO3A1Q9UIG8 710 aa19.09■□□□□ 0.65
SREBF1-206ENST00000423161 PKD1L2Q7Z442 2459 aa19.09■□□□□ 0.65
SREBF1-206ENST00000423161 DMXL2Q8TDJ6 3036 aa19.09■□□□□ 0.65
SREBF1-206ENST00000423161 GTPBP10A4D1E9 387 aaKnown RBP19.08■□□□□ 0.64
SREBF1-206ENST00000423161 SRRM3A6NNA2 597 aaPredicted RBP19.08■□□□□ 0.64
SREBF1-206ENST00000423161 RNASEH2AO75792 299 aaKnown RBP19.08■□□□□ 0.64
SREBF1-206ENST00000423161 GLI1P08151 1106 aa19.08■□□□□ 0.64
SREBF1-206ENST00000423161 SLC2A3P11169 496 aa19.08■□□□□ 0.64
SREBF1-206ENST00000423161 ABCB4P21439 1286 aa19.08■□□□□ 0.64
SREBF1-206ENST00000423161 MTIF2P46199 727 aaKnown RBP19.08■□□□□ 0.64
SREBF1-206ENST00000423161 PSMD8P48556 350 aa19.08■□□□□ 0.64
SREBF1-206ENST00000423161 NUMBP49757 651 aa19.08■□□□□ 0.64
SREBF1-206ENST00000423161 GALCP54803 685 aa19.08■□□□□ 0.64
SREBF1-206ENST00000423161 EFHC1Q5JVL4 640 aa19.08■□□□□ 0.64
SREBF1-206ENST00000423161 RABGAP1LQ5R372 815 aa19.08■□□□□ 0.64
SREBF1-206ENST00000423161 TTC39BQ5VTQ0 682 aaPredicted RBP19.08■□□□□ 0.64
SREBF1-206ENST00000423161 DBX2Q6ZNG2 339 aa19.08■□□□□ 0.64
SREBF1-206ENST00000423161 SLCO6A1Q86UG4 719 aa19.08■□□□□ 0.64
SREBF1-206ENST00000423161 IRF2BP1Q8IU81 584 aa19.08■□□□□ 0.64
SREBF1-206ENST00000423161 CCAR2Q8N163 923 aaKnown RBP19.08■□□□□ 0.64
SREBF1-206ENST00000423161 WDTC1Q8N5D0 677 aa19.08■□□□□ 0.64
SREBF1-206ENST00000423161 BAHD1Q8TBE0 780 aaPredicted RBP19.08■□□□□ 0.64
SREBF1-206ENST00000423161 RHBDD1Q8TEB9 315 aa19.08■□□□□ 0.64
SREBF1-206ENST00000423161 RNF34Q969K3 372 aa19.08■□□□□ 0.64
SREBF1-206ENST00000423161 IGSF8Q969P0 613 aa19.08■□□□□ 0.64
SREBF1-206ENST00000423161 PPP1R13BQ96KQ4 1090 aa19.08■□□□□ 0.64
SREBF1-206ENST00000423161 SLC2A13Q96QE2 648 aa19.08■□□□□ 0.64
SREBF1-206ENST00000423161 PRMT1Q99873 361 aaKnown RBP19.08■□□□□ 0.64
SREBF1-206ENST00000423161 OMDQ99983 421 aa19.08■□□□□ 0.64
SREBF1-206ENST00000423161 ORAI3Q9BRQ5 295 aa19.08■□□□□ 0.64
SREBF1-206ENST00000423161 NEUROG2Q9H2A3 272 aa19.08■□□□□ 0.64
SREBF1-206ENST00000423161 ASNSD1Q9NWL6 643 aa19.08■□□□□ 0.64
SREBF1-206ENST00000423161 PCDHGC3Q9UN70 934 aa19.08■□□□□ 0.64
SREBF1-206ENST00000423161 DOCK9Q9BZ29 2069 aa19.08■□□□□ 0.64
SREBF1-206ENST00000423161 SPEGQ15772 3267 aa19.08■□□□□ 0.64
SREBF1-206ENST00000423161 LRRC72A6NJI9 287 aa19.07■□□□□ 0.64
SREBF1-206ENST00000423161 HSF2BPO75031 334 aa19.07■□□□□ 0.64
SREBF1-206ENST00000423161 GRAP2O75791 330 aa19.07■□□□□ 0.64
SREBF1-206ENST00000423161 PDGFRAP16234 1089 aa19.07■□□□□ 0.64
SREBF1-206ENST00000423161 PON1P27169 355 aa19.07■□□□□ 0.64
SREBF1-206ENST00000423161 CCR1P32246 355 aa19.07■□□□□ 0.64
SREBF1-206ENST00000423161 SLC8A1P32418 973 aa19.07■□□□□ 0.64
SREBF1-206ENST00000423161 STK19P49842 368 aaPredicted RBP19.07■□□□□ 0.64
SREBF1-206ENST00000423161 PTK2Q05397 1052 aa19.07■□□□□ 0.64
SREBF1-206ENST00000423161 SLC12A1Q13621 1099 aa19.07■□□□□ 0.64
SREBF1-206ENST00000423161 SUZ12Q15022 739 aaKnown RBP19.07■□□□□ 0.64
SREBF1-206ENST00000423161 TPD52L1Q16890 204 aaPredicted RBP19.07■□□□□ 0.64
SREBF1-206ENST00000423161 NCEH1Q6PIU2 408 aa19.07■□□□□ 0.64
SREBF1-206ENST00000423161 FAM183BPQ6ZVS7 135 aa19.07■□□□□ 0.64
SREBF1-206ENST00000423161 STK40Q8N2I9 435 aa19.07■□□□□ 0.64
SREBF1-206ENST00000423161 C1orf131Q8NDD1 294 aaKnown RBP19.07■□□□□ 0.64
SREBF1-206ENST00000423161 NOX5Q96PH1 765 aa19.07■□□□□ 0.64
SREBF1-206ENST00000423161 CDC6Q99741 560 aa19.07■□□□□ 0.64
SREBF1-206ENST00000423161 ADAMTS1Q9UHI8 967 aa19.07■□□□□ 0.64
SREBF1-206ENST00000423161 AJAP1Q9UKB5 411 aaPredicted RBP19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms