RNA–Protein interactions for RNA: ENST00000420813.5

MSH6-203, Transcript of mutS homolog 6, humanhuman

TSL 4

Gene MSH6, Length 491 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-203ENST00000420813 KIF19Q2TAC6 998 aa17.95■□□□□ 0.46
MSH6-203ENST00000420813 C9orf64Q5T6V5 341 aa17.95■□□□□ 0.46
MSH6-203ENST00000420813 TTC39BQ5VTQ0 682 aaPredicted RBP17.95■□□□□ 0.46
MSH6-203ENST00000420813 RAP1GAP2Q684P5 730 aa17.95■□□□□ 0.46
MSH6-203ENST00000420813 MMS22LQ6ZRQ5 1243 aa17.95■□□□□ 0.46
MSH6-203ENST00000420813 BAHD1Q8TBE0 780 aaPredicted RBP17.95■□□□□ 0.46
MSH6-203ENST00000420813 SETD7Q8WTS6 366 aaKnown RBP17.95■□□□□ 0.46
MSH6-203ENST00000420813 SHC3Q92529 594 aa17.95■□□□□ 0.46
MSH6-203ENST00000420813 ACP6Q9NPH0 428 aa17.95■□□□□ 0.46
MSH6-203ENST00000420813 ASNSD1Q9NWL6 643 aa17.95■□□□□ 0.46
MSH6-203ENST00000420813 FBXL12Q9NXK8 326 aa17.95■□□□□ 0.46
MSH6-203ENST00000420813 SLC12A6Q9UHW9 1150 aa17.95■□□□□ 0.46
MSH6-203ENST00000420813 PCDHGC3Q9UN70 934 aa17.95■□□□□ 0.46
MSH6-203ENST00000420813 DMXL2Q8TDJ6 3036 aa17.95■□□□□ 0.46
MSH6-203ENST00000420813 ANKRD11Q6UB99 2663 aaPredicted RBP17.94■□□□□ 0.46
MSH6-203ENST00000420813 WDFY3Q8IZQ1 3526 aa17.94■□□□□ 0.46
MSH6-203ENST00000420813 EDDM13A0A1B0GTR0 161 aa17.94■□□□□ 0.46
MSH6-203ENST00000420813 KCNU1A8MYU2 1149 aa17.94■□□□□ 0.46
MSH6-203ENST00000420813 F5H5T6 163 aa17.94■□□□□ 0.46
MSH6-203ENST00000420813 SLC9A1P19634 815 aa17.94■□□□□ 0.46
MSH6-203ENST00000420813 ECT2LQ008S8 904 aa17.94■□□□□ 0.46
MSH6-203ENST00000420813 MTA1Q13330 715 aa17.94■□□□□ 0.46
MSH6-203ENST00000420813 SUZ12Q15022 739 aaKnown RBP17.94■□□□□ 0.46
MSH6-203ENST00000420813 ARHGAP44Q17R89 818 aa17.94■□□□□ 0.46
MSH6-203ENST00000420813 EXOC3L4Q17RC7 722 aa17.94■□□□□ 0.46
MSH6-203ENST00000420813 RNF219Q5W0B1 726 aaPredicted RBP17.94■□□□□ 0.46
MSH6-203ENST00000420813 KIAA0895LQ68EN5 471 aa17.94■□□□□ 0.46
MSH6-203ENST00000420813 GJB7Q6PEY0 223 aa17.94■□□□□ 0.46
MSH6-203ENST00000420813 DHX40Q8IX18 779 aaKnown RBP17.94■□□□□ 0.46
MSH6-203ENST00000420813 IGSF8Q969P0 613 aa17.94■□□□□ 0.46
MSH6-203ENST00000420813 SLC2A13Q96QE2 648 aa17.94■□□□□ 0.46
MSH6-203ENST00000420813 CDC6Q99741 560 aa17.94■□□□□ 0.46
MSH6-203ENST00000420813 PRMT1Q99873 361 aaKnown RBP17.94■□□□□ 0.46
MSH6-203ENST00000420813 ORAI3Q9BRQ5 295 aa17.94■□□□□ 0.46
MSH6-203ENST00000420813 ADAMTS1Q9UHI8 967 aa17.94■□□□□ 0.46
MSH6-203ENST00000420813 FZD4Q9ULV1 537 aa17.94■□□□□ 0.46
MSH6-203ENST00000420813 ANKRD6Q9Y2G4 727 aa17.94■□□□□ 0.46
MSH6-203ENST00000420813 SNX11Q9Y5W9 270 aa17.94■□□□□ 0.46
MSH6-203ENST00000420813 SPEGQ15772 3267 aa17.94■□□□□ 0.46
MSH6-203ENST00000420813 HSF2BPO75031 334 aa17.93■□□□□ 0.46
MSH6-203ENST00000420813 IGHV4-34P06331 123 aa17.93■□□□□ 0.46
MSH6-203ENST00000420813 USP8P40818 1118 aa17.93■□□□□ 0.46
MSH6-203ENST00000420813 CTSOP43234 321 aaPredicted RBP17.93■□□□□ 0.46
MSH6-203ENST00000420813 OXCT1P55809 520 aa17.93■□□□□ 0.46
MSH6-203ENST00000420813 UBE2HP62256 183 aa17.93■□□□□ 0.46
MSH6-203ENST00000420813 PITX1P78337 314 aaPredicted RBP17.93■□□□□ 0.46
MSH6-203ENST00000420813 CDK17Q00537 523 aa17.93■□□□□ 0.46
MSH6-203ENST00000420813 TAF5Q15542 800 aa17.93■□□□□ 0.46
MSH6-203ENST00000420813 EFHC1Q5JVL4 640 aa17.93■□□□□ 0.46
MSH6-203ENST00000420813 APCDD1Q8J025 514 aa17.93■□□□□ 0.46
MSH6-203ENST00000420813 GANCQ8TET4 914 aa17.93■□□□□ 0.46
MSH6-203ENST00000420813 PPP1R13BQ96KQ4 1090 aa17.93■□□□□ 0.46
MSH6-203ENST00000420813 NOX5Q96PH1 765 aa17.93■□□□□ 0.46
MSH6-203ENST00000420813 CPXM1Q96SM3 734 aa17.93■□□□□ 0.46
MSH6-203ENST00000420813 FAM204AQ9H8W3 233 aa17.93■□□□□ 0.46
MSH6-203ENST00000420813 CEP83Q9Y592 693 aa17.93■□□□□ 0.46
MSH6-203ENST00000420813 GOLGA4Q13439 2230 aaKnown RBP17.92■□□□□ 0.46
MSH6-203ENST00000420813 A0A1B0GVM2 712 aa17.92■□□□□ 0.46
MSH6-203ENST00000420813 A0A1W2PP55 124 aa17.92■□□□□ 0.46
MSH6-203ENST00000420813 A0A1W2PPC4 97 aa17.92■□□□□ 0.46
MSH6-203ENST00000420813 TCAF2A6NFQ2 919 aa17.92■□□□□ 0.46
MSH6-203ENST00000420813 LRRC72A6NJI9 287 aa17.92■□□□□ 0.46
MSH6-203ENST00000420813 SRRM3A6NNA2 597 aaPredicted RBP17.92■□□□□ 0.46
MSH6-203ENST00000420813 TTC34A8MYJ7 566 aa17.92■□□□□ 0.46
MSH6-203ENST00000420813 C10orf142B7Z368 130 aa17.92■□□□□ 0.46
MSH6-203ENST00000420813 MID1O15344 667 aa17.92■□□□□ 0.46
MSH6-203ENST00000420813 ABCB4P21439 1286 aa17.92■□□□□ 0.46
MSH6-203ENST00000420813 PON1P27169 355 aa17.92■□□□□ 0.46
MSH6-203ENST00000420813 CCR1P32246 355 aa17.92■□□□□ 0.46
MSH6-203ENST00000420813 NNMTP40261 264 aa17.92■□□□□ 0.46
MSH6-203ENST00000420813 CCT8P50990 548 aa17.92■□□□□ 0.46
MSH6-203ENST00000420813 PLK1P53350 603 aa17.92■□□□□ 0.46
MSH6-203ENST00000420813 GALCP54803 685 aa17.92■□□□□ 0.46
MSH6-203ENST00000420813 RACK1P63244 317 aaKnown RBP17.92■□□□□ 0.46
MSH6-203ENST00000420813 PTK2Q05397 1052 aa17.92■□□□□ 0.46
MSH6-203ENST00000420813 SULT2A1Q06520 285 aa17.92■□□□□ 0.46
MSH6-203ENST00000420813 RABGAP1LQ5R372 815 aa17.92■□□□□ 0.46
MSH6-203ENST00000420813 IRF2BP1Q8IU81 584 aa17.92■□□□□ 0.46
MSH6-203ENST00000420813 CREBRFQ8IUR6 639 aa17.92■□□□□ 0.46
MSH6-203ENST00000420813 MMAAQ8IVH4 418 aaKnown RBP17.92■□□□□ 0.46
MSH6-203ENST00000420813 DEFB106AQ8N104 65 aa17.92■□□□□ 0.46
MSH6-203ENST00000420813 CCAR2Q8N163 923 aaKnown RBP17.92■□□□□ 0.46
MSH6-203ENST00000420813 WDTC1Q8N5D0 677 aa17.92■□□□□ 0.46
MSH6-203ENST00000420813 MLKLQ8NB16 471 aa17.92■□□□□ 0.46
MSH6-203ENST00000420813 OR2T34Q8NGX1 318 aa17.92■□□□□ 0.46
MSH6-203ENST00000420813 PPP1R9BQ96SB3 815 aa17.92■□□□□ 0.46
MSH6-203ENST00000420813 OMDQ99983 421 aa17.92■□□□□ 0.46
MSH6-203ENST00000420813 DDIT4Q9NX09 232 aa17.92■□□□□ 0.46
MSH6-203ENST00000420813 SERGEFQ9UGK8 458 aa17.92■□□□□ 0.46
MSH6-203ENST00000420813 SLCO3A1Q9UIG8 710 aa17.92■□□□□ 0.46
MSH6-203ENST00000420813 TPX2Q9ULW0 747 aaKnown RBP17.92■□□□□ 0.46
MSH6-203ENST00000420813 COL5A1P20908 1838 aaPredicted RBP17.92■□□□□ 0.46
MSH6-203ENST00000420813 DOCK4Q8N1I0 1966 aa17.91■□□□□ 0.46
MSH6-203ENST00000420813 DOCK9Q9BZ29 2069 aa17.91■□□□□ 0.46
MSH6-203ENST00000420813 ACACAQ13085 2346 aa17.91■□□□□ 0.46
MSH6-203ENST00000420813 VILLO15195 856 aa17.91■□□□□ 0.46
MSH6-203ENST00000420813 PCDHGA12O60330 932 aa17.91■□□□□ 0.46
MSH6-203ENST00000420813 DFNA5O60443 496 aa17.91■□□□□ 0.46
MSH6-203ENST00000420813 ADH1BP00325 375 aa17.91■□□□□ 0.46
MSH6-203ENST00000420813 C5AR1P21730 350 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms