RNA–Protein interactions for RNA: ENST00000420363.5

CPNE1-211, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-211ENST00000420363 CBFA2T2O43439 604 aa22.05■■□□□ 1.12
CPNE1-211ENST00000420363 RHOBTB1O94844 696 aa22.05■■□□□ 1.12
CPNE1-211ENST00000420363 ASLP04424 464 aa22.05■■□□□ 1.12
CPNE1-211ENST00000420363 PDGFRAP16234 1089 aa22.05■■□□□ 1.12
CPNE1-211ENST00000420363 POLR2EP19388 210 aaKnown RBP22.05■■□□□ 1.12
CPNE1-211ENST00000420363 MPLP40238 635 aa22.05■■□□□ 1.12
CPNE1-211ENST00000420363 ZBED6P86452 979 aa22.05■■□□□ 1.12
CPNE1-211ENST00000420363 BYSLQ13895 437 aaKnown RBP22.05■■□□□ 1.12
CPNE1-211ENST00000420363 PLA2G2CQ5R387 149 aa22.05■■□□□ 1.12
CPNE1-211ENST00000420363 KIAA1211LQ6NV74 962 aa22.05■■□□□ 1.12
CPNE1-211ENST00000420363 DNAJC24Q6P3W2 148 aa22.05■■□□□ 1.12
CPNE1-211ENST00000420363 SERPINA13PQ6UXR4 307 aa22.05■■□□□ 1.12
CPNE1-211ENST00000420363 ZNF571Q7Z3V5 609 aaPredicted RBP22.05■■□□□ 1.12
CPNE1-211ENST00000420363 CCAR2Q8N163 923 aaKnown RBP22.05■■□□□ 1.12
CPNE1-211ENST00000420363 KDM1BQ8NB78 822 aa22.05■■□□□ 1.12
CPNE1-211ENST00000420363 JOSD2Q8TAC2 188 aa22.05■■□□□ 1.12
CPNE1-211ENST00000420363 RXFP2Q8WXD0 754 aa22.05■■□□□ 1.12
CPNE1-211ENST00000420363 C1orf74Q96LT6 269 aa22.05■■□□□ 1.12
CPNE1-211ENST00000420363 HAPLN3Q96S86 360 aa22.05■■□□□ 1.12
CPNE1-211ENST00000420363 XPO4Q9C0E2 1151 aaKnown RBP22.05■■□□□ 1.12
CPNE1-211ENST00000420363 SMOC1Q9H4F8 434 aa22.05■■□□□ 1.12
CPNE1-211ENST00000420363 VPS45Q9NRW7 570 aa22.05■■□□□ 1.12
CPNE1-211ENST00000420363 RXFP3Q9NSD7 469 aa22.05■■□□□ 1.12
CPNE1-211ENST00000420363 KIAA1522Q9P206 1035 aaPredicted RBP22.05■■□□□ 1.12
CPNE1-211ENST00000420363 CAPN11Q9UMQ6 739 aa22.05■■□□□ 1.12
CPNE1-211ENST00000420363 BZW2Q9Y6E2 419 aaKnown RBP22.05■■□□□ 1.12
CPNE1-211ENST00000420363 CACNA1BQ00975 2339 aa22.05■■□□□ 1.12
CPNE1-211ENST00000420363 I6L893 689 aaPredicted RBP22.04■■□□□ 1.12
CPNE1-211ENST00000420363 DCLK1O15075 740 aa22.04■■□□□ 1.12
CPNE1-211ENST00000420363 CLDN11O75508 207 aa22.04■■□□□ 1.12
CPNE1-211ENST00000420363 MOCS3O95396 460 aa22.04■■□□□ 1.12
CPNE1-211ENST00000420363 NDUFV2P19404 249 aa22.04■■□□□ 1.12
CPNE1-211ENST00000420363 P2RY2P41231 377 aa22.04■■□□□ 1.12
CPNE1-211ENST00000420363 PTPRNQ16849 979 aa22.04■■□□□ 1.12
CPNE1-211ENST00000420363 CCDC14Q49A88 953 aa22.04■■□□□ 1.12
CPNE1-211ENST00000420363 PPP1R15BQ5SWA1 713 aa22.04■■□□□ 1.12
CPNE1-211ENST00000420363 STPG1Q5TH74 334 aa22.04■■□□□ 1.12
CPNE1-211ENST00000420363 SORCS1Q8WY21 1168 aa22.04■■□□□ 1.12
CPNE1-211ENST00000420363 CENPIQ92674 756 aaPredicted RBP22.04■■□□□ 1.12
CPNE1-211ENST00000420363 DUSP15Q9H1R2 295 aaPredicted RBP22.04■■□□□ 1.12
CPNE1-211ENST00000420363 TMEM245Q9H330 911 aa22.04■■□□□ 1.12
CPNE1-211ENST00000420363 ANLNQ9NQW6 1124 aa22.04■■□□□ 1.12
CPNE1-211ENST00000420363 INTS6Q9UL03 887 aaKnown RBP22.04■■□□□ 1.12
CPNE1-211ENST00000420363 VANGL2Q9ULK5 521 aa22.04■■□□□ 1.12
CPNE1-211ENST00000420363 PLA2G4CQ9UP65 541 aa22.04■■□□□ 1.12
CPNE1-211ENST00000420363 RAD54BQ9Y620 910 aa22.04■■□□□ 1.12
CPNE1-211ENST00000420363 ANKRD62A6NC57 917 aa22.03■■□□□ 1.12
CPNE1-211ENST00000420363 SYNCRIPO60506 623 aaKnown RBP22.03■■□□□ 1.12
CPNE1-211ENST00000420363 GYPCP04921 128 aa22.03■■□□□ 1.12
CPNE1-211ENST00000420363 C7P10643 843 aa22.03■■□□□ 1.12
CPNE1-211ENST00000420363 GPD1P21695 349 aa22.03■■□□□ 1.12
CPNE1-211ENST00000420363 PRKCHP24723 683 aa22.03■■□□□ 1.12
CPNE1-211ENST00000420363 RFC1P35251 1148 aaPredicted RBP22.03■■□□□ 1.12
CPNE1-211ENST00000420363 CSKP41240 450 aa22.03■■□□□ 1.12
CPNE1-211ENST00000420363 CDH4P55283 916 aa22.03■■□□□ 1.12
CPNE1-211ENST00000420363 ATP11AP98196 1134 aa22.03■■□□□ 1.12
CPNE1-211ENST00000420363 PLEKHG6Q3KR16 790 aa22.03■■□□□ 1.12
CPNE1-211ENST00000420363 FSCBQ5H9T9 825 aa22.03■■□□□ 1.12
CPNE1-211ENST00000420363 PITRM1Q5JRX3 1037 aa22.03■■□□□ 1.12
CPNE1-211ENST00000420363 HGSNATQ68CP4 663 aa22.03■■□□□ 1.12
CPNE1-211ENST00000420363 CXorf57Q6NSI4 855 aaKnown RBP22.03■■□□□ 1.12
CPNE1-211ENST00000420363 FAM131BQ86XD5 332 aa22.03■■□□□ 1.12
CPNE1-211ENST00000420363 ZNF683Q8IZ20 524 aa22.03■■□□□ 1.12
CPNE1-211ENST00000420363 IGSF8Q969P0 613 aa22.03■■□□□ 1.12
CPNE1-211ENST00000420363 FBRSQ9HAH7 460 aa22.03■■□□□ 1.12
CPNE1-211ENST00000420363 TAS2R14Q9NYV8 317 aa22.03■■□□□ 1.12
CPNE1-211ENST00000420363 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP22.03■■□□□ 1.126e-6■□□□□ 9.8
CPNE1-211ENST00000420363 DOCK4Q8N1I0 1966 aa22.03■■□□□ 1.12
CPNE1-211ENST00000420363 IGLV3-10A0A075B6K4 115 aa22.02■■□□□ 1.12
CPNE1-211ENST00000420363 WASH3PC4AMC7 463 aa22.02■■□□□ 1.12
CPNE1-211ENST00000420363 ZNF217O75362 1048 aa22.02■■□□□ 1.12
CPNE1-211ENST00000420363 NRG1Q02297 640 aaPredicted RBP22.02■■□□□ 1.12
CPNE1-211ENST00000420363 CREB5Q02930 508 aa22.02■■□□□ 1.12
CPNE1-211ENST00000420363 TRIM14Q14142 442 aa22.02■■□□□ 1.12
CPNE1-211ENST00000420363 C15orf59Q2T9L4 293 aaPredicted RBP22.02■■□□□ 1.12
CPNE1-211ENST00000420363 MAP7D1Q3KQU3 841 aa22.02■■□□□ 1.12
CPNE1-211ENST00000420363 ARL13BQ3SXY8 428 aa22.02■■□□□ 1.12
CPNE1-211ENST00000420363 FNDC3BQ53EP0 1204 aaKnown RBP22.02■■□□□ 1.12
CPNE1-211ENST00000420363 PMS2CLQ68D20 193 aa22.02■■□□□ 1.12
CPNE1-211ENST00000420363 WDR59Q6PJI9 974 aa22.02■■□□□ 1.12
CPNE1-211ENST00000420363 LRRC31Q6UY01 552 aa22.02■■□□□ 1.12
CPNE1-211ENST00000420363 METTL3Q86U44 580 aaKnown RBP22.02■■□□□ 1.12
CPNE1-211ENST00000420363 CIR1Q86X95 450 aaPredicted RBP22.02■■□□□ 1.12
CPNE1-211ENST00000420363 PGBD3Q8N328 593 aa22.02■■□□□ 1.12
CPNE1-211ENST00000420363 CYB5D2Q8WUJ1 264 aa22.02■■□□□ 1.12
CPNE1-211ENST00000420363 NTAN1Q96AB6 310 aa22.02■■□□□ 1.12
CPNE1-211ENST00000420363 MRGPRX1Q96LB2 322 aa22.02■■□□□ 1.12
CPNE1-211ENST00000420363 PPP1R9BQ96SB3 815 aa22.02■■□□□ 1.12
CPNE1-211ENST00000420363 SIK2Q9H0K1 926 aa22.02■■□□□ 1.12
CPNE1-211ENST00000420363 LUC7L2Q9Y383 392 aaKnown RBP22.02■■□□□ 1.12
CPNE1-211ENST00000420363 NYNRINQ9P2P1 1898 aaKnown RBP22.01■■□□□ 1.11
CPNE1-211ENST00000420363 DDX3XO00571 662 aaKnown RBP eCLIP22.01■■□□□ 1.111e-13■■■□□ 15.3
CPNE1-211ENST00000420363 TM4SF5O14894 197 aa22.01■■□□□ 1.11
CPNE1-211ENST00000420363 GJB6O95452 261 aa22.01■■□□□ 1.11
CPNE1-211ENST00000420363 EPHX1P07099 455 aa22.01■■□□□ 1.11
CPNE1-211ENST00000420363 RRM1P23921 792 aa22.01■■□□□ 1.11
CPNE1-211ENST00000420363 GGCXP38435 758 aa22.01■■□□□ 1.11
CPNE1-211ENST00000420363 ZNF143P52747 638 aaPredicted RBP22.01■■□□□ 1.11
CPNE1-211ENST00000420363 PLK1P53350 603 aa22.01■■□□□ 1.11
CPNE1-211ENST00000420363 SULT2A1Q06520 285 aa22.01■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms