RNA–Protein interactions for RNA: ENST00000419378.5

HMGN1-205, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-205ENST00000419378 FAM122AQ96E09 287 aa7.32□□□□□ -1.24
HMGN1-205ENST00000419378 EXOC2Q96KP1 924 aa7.32□□□□□ -1.24
HMGN1-205ENST00000419378 C8orf48Q96LL4 319 aa7.32□□□□□ -1.24
HMGN1-205ENST00000419378 LRRC3BQ96PB8 259 aa7.32□□□□□ -1.24
HMGN1-205ENST00000419378 TWNKQ96RR1 684 aa7.32□□□□□ -1.24
HMGN1-205ENST00000419378 PRRX2Q99811 253 aa7.32□□□□□ -1.24
HMGN1-205ENST00000419378 MED10Q9BTT4 135 aa7.32□□□□□ -1.24
HMGN1-205ENST00000419378 DDX23Q9BUQ8 820 aaKnown RBP7.32□□□□□ -1.24
HMGN1-205ENST00000419378 CYP3A43Q9HB55 503 aa7.32□□□□□ -1.24
HMGN1-205ENST00000419378 TRPV5Q9NQA5 729 aa7.32□□□□□ -1.24
HMGN1-205ENST00000419378 HEBP1Q9NRV9 189 aa7.32□□□□□ -1.24
HMGN1-205ENST00000419378 SEMA3GQ9NS98 782 aa7.32□□□□□ -1.24
HMGN1-205ENST00000419378 FAM49BQ9NUQ9 324 aa7.32□□□□□ -1.24
HMGN1-205ENST00000419378 RAB20Q9NX57 234 aa7.32□□□□□ -1.24
HMGN1-205ENST00000419378 OBP2AQ9NY56 170 aa7.32□□□□□ -1.24
HMGN1-205ENST00000419378 GPR55Q9Y2T6 319 aaPredicted RBP7.32□□□□□ -1.24
HMGN1-205ENST00000419378 PATJQ8NI35 1801 aa7.31□□□□□ -1.24
HMGN1-205ENST00000419378 ATP8B3O60423 1300 aa7.31□□□□□ -1.24
HMGN1-205ENST00000419378 MIA3Q5JRA6 1907 aa7.31□□□□□ -1.24
HMGN1-205ENST00000419378 TRAV19A0A0A6YYK7 116 aa7.31□□□□□ -1.24
HMGN1-205ENST00000419378 KANSL1LA0AUZ9 987 aa7.31□□□□□ -1.24
HMGN1-205ENST00000419378 C2orf78A6NCI8 922 aa7.31□□□□□ -1.24
HMGN1-205ENST00000419378 CHADO15335 359 aa7.31□□□□□ -1.24
HMGN1-205ENST00000419378 SLC5A3P53794 718 aa7.31□□□□□ -1.24
HMGN1-205ENST00000419378 STX17P56962 302 aa7.31□□□□□ -1.24
HMGN1-205ENST00000419378 AMPD2Q01433 879 aa7.31□□□□□ -1.24
HMGN1-205ENST00000419378 POU4F1Q01851 419 aa7.31□□□□□ -1.24
HMGN1-205ENST00000419378 NHLH1Q02575 133 aa7.31□□□□□ -1.24
HMGN1-205ENST00000419378 ZNF268Q14587 947 aaPredicted RBP7.31□□□□□ -1.24
HMGN1-205ENST00000419378 UBXN2BQ14CS0 331 aa7.31□□□□□ -1.24
HMGN1-205ENST00000419378 SF1Q15637 639 aaKnown RBP7.31□□□□□ -1.24
HMGN1-205ENST00000419378 GAB4Q2WGN9 574 aa7.31□□□□□ -1.24
HMGN1-205ENST00000419378 CCDC40Q4G0X9 1142 aa7.31□□□□□ -1.24
HMGN1-205ENST00000419378 ARHGAP29Q52LW3 1261 aa7.31□□□□□ -1.24
HMGN1-205ENST00000419378 FRMD5Q7Z6J6 570 aa7.31□□□□□ -1.24
HMGN1-205ENST00000419378 THAP5Q7Z6K1 395 aa7.31□□□□□ -1.24
HMGN1-205ENST00000419378 FILIP1Q7Z7B0 1213 aa7.31□□□□□ -1.24
HMGN1-205ENST00000419378 CRYBG2Q8N1P7 616 aa7.31□□□□□ -1.24
HMGN1-205ENST00000419378 CELF5Q8N6W0 485 aaKnown RBP7.31□□□□□ -1.24
HMGN1-205ENST00000419378 C12orf29Q8N999 325 aa7.31□□□□□ -1.24
HMGN1-205ENST00000419378 ZMIZ2Q8NF64 920 aa7.31□□□□□ -1.24
HMGN1-205ENST00000419378 PJA1Q8NG27 643 aa7.31□□□□□ -1.24
HMGN1-205ENST00000419378 SLC2A14Q8TDB8 520 aa7.31□□□□□ -1.24
HMGN1-205ENST00000419378 BPIFB1Q8TDL5 484 aa7.31□□□□□ -1.24
HMGN1-205ENST00000419378 USP13Q92995 863 aaPredicted RBP7.31□□□□□ -1.24
HMGN1-205ENST00000419378 SMARCD1Q96GM5 515 aa7.31□□□□□ -1.24
HMGN1-205ENST00000419378 FAXDC2Q96IV6 333 aa7.31□□□□□ -1.24
HMGN1-205ENST00000419378 ZFYVE19Q96K21 471 aa7.31□□□□□ -1.24
HMGN1-205ENST00000419378 SLC22A12Q96S37 553 aa7.31□□□□□ -1.24
HMGN1-205ENST00000419378 KCNK16Q96T55 309 aa7.31□□□□□ -1.24
HMGN1-205ENST00000419378 MCMBPQ9BTE3 642 aa7.31□□□□□ -1.24
HMGN1-205ENST00000419378 IER2Q9BTL4 223 aa7.31□□□□□ -1.24
HMGN1-205ENST00000419378 TTLL2Q9BWV7 592 aa7.31□□□□□ -1.24
HMGN1-205ENST00000419378 CLSTN2Q9H4D0 955 aa7.31□□□□□ -1.24
HMGN1-205ENST00000419378 KIF9Q9HAQ2 790 aa7.31□□□□□ -1.24
HMGN1-205ENST00000419378 METTL14Q9HCE5 456 aaKnown RBP7.31□□□□□ -1.24
HMGN1-205ENST00000419378 TRPC7Q9HCX4 862 aa7.31□□□□□ -1.24
HMGN1-205ENST00000419378 ATP13A1Q9HD20 1204 aa7.31□□□□□ -1.24
HMGN1-205ENST00000419378 LTB4R2Q9NPC1 389 aa7.31□□□□□ -1.24
HMGN1-205ENST00000419378 DMAP1Q9NPF5 467 aaPredicted RBP7.31□□□□□ -1.24
HMGN1-205ENST00000419378 EHD2Q9NZN4 543 aa7.31□□□□□ -1.24
HMGN1-205ENST00000419378 DLGAP2Q9P1A6 1054 aa7.31□□□□□ -1.24
HMGN1-205ENST00000419378 CCL26Q9Y258 94 aa7.31□□□□□ -1.24
HMGN1-205ENST00000419378 COQ4Q9Y3A0 265 aa7.31□□□□□ -1.24
HMGN1-205ENST00000419378 SNX11Q9Y5W9 270 aa7.31□□□□□ -1.24
HMGN1-205ENST00000419378 ANAPC1Q9H1A4 1944 aa7.31□□□□□ -1.24
HMGN1-205ENST00000419378 ZNF638Q14966 1978 aaKnown RBP7.3□□□□□ -1.24
HMGN1-205ENST00000419378 TRBV23-1A0A0A0MS06 115 aa7.3□□□□□ -1.24
HMGN1-205ENST00000419378 ZNF840PA6NDX5 716 aa7.3□□□□□ -1.24
HMGN1-205ENST00000419378 SHISA7A6NL88 538 aa7.3□□□□□ -1.24
HMGN1-205ENST00000419378 RTN3O95197 1032 aaPredicted RBP7.3□□□□□ -1.24
HMGN1-205ENST00000419378 ASMTLO95671 621 aa7.3□□□□□ -1.24
HMGN1-205ENST00000419378 CKMP06732 381 aa7.3□□□□□ -1.24
HMGN1-205ENST00000419378 DCNP07585 359 aaKnown RBP7.3□□□□□ -1.24
HMGN1-205ENST00000419378 CD3EP07766 207 aa7.3□□□□□ -1.24
HMGN1-205ENST00000419378 FAM200BP0CF97 657 aa7.3□□□□□ -1.24
HMGN1-205ENST00000419378 PABPC1P11940 636 aaKnown RBP7.3□□□□□ -1.24
HMGN1-205ENST00000419378 GLULP15104 373 aa7.3□□□□□ -1.24
HMGN1-205ENST00000419378 TRIM21P19474 475 aaKnown RBP7.3□□□□□ -1.24
HMGN1-205ENST00000419378 CD72P21854 359 aa7.3□□□□□ -1.24
HMGN1-205ENST00000419378 ADORA2BP29275 332 aa7.3□□□□□ -1.24
HMGN1-205ENST00000419378 FMO5P49326 533 aa7.3□□□□□ -1.24
HMGN1-205ENST00000419378 MAP3K7CLP57077 242 aa7.3□□□□□ -1.24
HMGN1-205ENST00000419378 TAF10Q12962 218 aa7.3□□□□□ -1.24
HMGN1-205ENST00000419378 ZC3H12BQ5HYM0 836 aaKnown RBP7.3□□□□□ -1.24
HMGN1-205ENST00000419378 NUP93Q8N1F7 819 aa7.3□□□□□ -1.24
HMGN1-205ENST00000419378 TTC39CQ8N584 583 aa7.3□□□□□ -1.24
HMGN1-205ENST00000419378 SCAMP5Q8TAC9 235 aa7.3□□□□□ -1.24
HMGN1-205ENST00000419378 CSGALNACT1Q8TDX6 532 aa7.3□□□□□ -1.24
HMGN1-205ENST00000419378 FBXO32Q969P5 355 aa7.3□□□□□ -1.24
HMGN1-205ENST00000419378 MSANTD3Q96H12 275 aa7.3□□□□□ -1.24
HMGN1-205ENST00000419378 IPO9Q96P70 1041 aaKnown RBP7.3□□□□□ -1.24
HMGN1-205ENST00000419378 SLITRK1Q96PX8 696 aa7.3□□□□□ -1.24
HMGN1-205ENST00000419378 HNRNPABQ99729 332 aaKnown RBP7.3□□□□□ -1.24
HMGN1-205ENST00000419378 SMOQ99835 787 aa7.3□□□□□ -1.24
HMGN1-205ENST00000419378 DHRS4Q9BTZ2 278 aa7.3□□□□□ -1.24
HMGN1-205ENST00000419378 NUP62CLQ9H1M0 184 aa7.3□□□□□ -1.24
HMGN1-205ENST00000419378 CSNK1G1Q9HCP0 422 aa7.3□□□□□ -1.24
HMGN1-205ENST00000419378 CISHQ9NSE2 258 aa7.3□□□□□ -1.24
HMGN1-205ENST00000419378 LMBRD1Q9NUN5 540 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms