RNA–Protein interactions for RNA: ENST00000417040.1

UBR4-205, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-205ENST00000417040 ANKRD63C9JTQ0 380 aa12.27□□□□□ -0.44
UBR4-205ENST00000417040 AVILO75366 819 aa12.27□□□□□ -0.44
UBR4-205ENST00000417040 ARL4DP49703 201 aa12.27□□□□□ -0.44
UBR4-205ENST00000417040 CASP5P51878 434 aa12.27□□□□□ -0.44
UBR4-205ENST00000417040 MADCAM1Q13477 382 aa12.27□□□□□ -0.44
UBR4-205ENST00000417040 CAMK2GQ13555 558 aaPredicted RBP12.27□□□□□ -0.44
UBR4-205ENST00000417040 IL27RAQ6UWB1 636 aa12.27□□□□□ -0.44
UBR4-205ENST00000417040 SCIMPQ6UWF3 145 aa12.27□□□□□ -0.44
UBR4-205ENST00000417040 ILDR2Q71H61 639 aa12.27□□□□□ -0.44
UBR4-205ENST00000417040 GATAD2AQ86YP4 633 aa12.27□□□□□ -0.44
UBR4-205ENST00000417040 WDR49Q8IV35 697 aa12.27□□□□□ -0.44
UBR4-205ENST00000417040 HMG20AQ9NP66 347 aa12.27□□□□□ -0.44
UBR4-205ENST00000417040 ETNK2Q9NVF9 386 aa12.27□□□□□ -0.44
UBR4-205ENST00000417040 DRG1Q9Y295 367 aaKnown RBP12.27□□□□□ -0.44
UBR4-205ENST00000417040 TPRKBQ9Y3C4 175 aa12.27□□□□□ -0.44
UBR4-205ENST00000417040 GPR75-ASB3A0A0A6YYF3 556 aa12.27□□□□□ -0.45
UBR4-205ENST00000417040 BTN3A3O00478 584 aa12.27□□□□□ -0.45
UBR4-205ENST00000417040 ICAM1P05362 532 aa12.27□□□□□ -0.45
UBR4-205ENST00000417040 FDX1P10109 184 aa12.27□□□□□ -0.45
UBR4-205ENST00000417040 RPL14P50914 215 aaKnown RBP12.27□□□□□ -0.45
UBR4-205ENST00000417040 SLC12A3P55017 1021 aa12.27□□□□□ -0.45
UBR4-205ENST00000417040 OXCT1P55809 520 aa12.27□□□□□ -0.45
UBR4-205ENST00000417040 TSNQ15631 228 aaKnown RBP12.27□□□□□ -0.45
UBR4-205ENST00000417040 MIIPQ5JXC2 388 aa12.27□□□□□ -0.45
UBR4-205ENST00000417040 FNBP1LQ5T0N5 605 aa12.27□□□□□ -0.45
UBR4-205ENST00000417040 PRMT9Q6P2P2 845 aa12.27□□□□□ -0.45
UBR4-205ENST00000417040 ZNF621Q6ZSS3 439 aa12.27□□□□□ -0.45
UBR4-205ENST00000417040 ZDHHC13Q8IUH4 622 aa12.27□□□□□ -0.45
UBR4-205ENST00000417040 CROCCP3Q8IVE0 287 aa12.27□□□□□ -0.45
UBR4-205ENST00000417040 FBXW8Q8N3Y1 598 aa12.27□□□□□ -0.45
UBR4-205ENST00000417040 IL17RBQ9NRM6 502 aa12.27□□□□□ -0.45
UBR4-205ENST00000417040 BTRCQ9Y297 605 aa12.27□□□□□ -0.45
UBR4-205ENST00000417040 CPS1P31327 1500 aa12.27□□□□□ -0.45
UBR4-205ENST00000417040 LSM1O15116 133 aaKnown RBP12.27□□□□□ -0.45
UBR4-205ENST00000417040 CYP2C8P10632 490 aa12.27□□□□□ -0.45
UBR4-205ENST00000417040 AKAP5P24588 427 aa12.27□□□□□ -0.45
UBR4-205ENST00000417040 CCNIQ14094 377 aa12.27□□□□□ -0.45
UBR4-205ENST00000417040 FBXO16Q8IX29 292 aaPredicted RBP12.27□□□□□ -0.45
UBR4-205ENST00000417040 C19orf60Q96EN9 201 aa12.27□□□□□ -0.45
UBR4-205ENST00000417040 RSL24D1Q9UHA3 163 aaKnown RBP12.27□□□□□ -0.45
UBR4-205ENST00000417040 PCDHA11Q9Y5I1 949 aa12.27□□□□□ -0.45
UBR4-205ENST00000417040 MOXD2PA6NHM9 499 aa12.27□□□□□ -0.45
UBR4-205ENST00000417040 TK2O00142 265 aa12.27□□□□□ -0.45
UBR4-205ENST00000417040 BTN3A1O00481 513 aa12.27□□□□□ -0.45
UBR4-205ENST00000417040 MYL12BO14950 172 aa12.27□□□□□ -0.45
UBR4-205ENST00000417040 ZNF286BP0CG31 522 aa12.27□□□□□ -0.45
UBR4-205ENST00000417040 LBPP18428 481 aa12.27□□□□□ -0.45
UBR4-205ENST00000417040 ATP6V1C1P21283 382 aa12.27□□□□□ -0.45
UBR4-205ENST00000417040 BCAT1P54687 386 aa12.27□□□□□ -0.45
UBR4-205ENST00000417040 C15orf59Q2T9L4 293 aaPredicted RBP12.27□□□□□ -0.45
UBR4-205ENST00000417040 NEK10Q6ZWH5 1172 aa12.27□□□□□ -0.45
UBR4-205ENST00000417040 FBXO32Q969P5 355 aa12.27□□□□□ -0.45
UBR4-205ENST00000417040 HGH1Q9BTY7 390 aa12.27□□□□□ -0.45
UBR4-205ENST00000417040 NRDE2Q9H7Z3 1164 aa12.27□□□□□ -0.45
UBR4-205ENST00000417040 FANCEQ9HB96 536 aa12.27□□□□□ -0.45
UBR4-205ENST00000417040 RPS6KB2Q9UBS0 482 aa12.27□□□□□ -0.45
UBR4-205ENST00000417040 SLC9A8Q9Y2E8 581 aa12.27□□□□□ -0.45
UBR4-205ENST00000417040 A0A087WZ62 844 aa12.26□□□□□ -0.45
UBR4-205ENST00000417040 SUPT20HL2P0C7V6 817 aa12.26□□□□□ -0.45
UBR4-205ENST00000417040 CYP4B1P13584 511 aa12.26□□□□□ -0.45
UBR4-205ENST00000417040 DARSP14868 501 aaKnown RBP12.26□□□□□ -0.45
UBR4-205ENST00000417040 BMP6P22004 513 aa12.26□□□□□ -0.45
UBR4-205ENST00000417040 JAK1P23458 1154 aa12.26□□□□□ -0.45
UBR4-205ENST00000417040 MIPP30301 263 aa12.26□□□□□ -0.45
UBR4-205ENST00000417040 LDLRAP1Q5SW96 308 aa12.26□□□□□ -0.45
UBR4-205ENST00000417040 ELMSAN1Q6PJG2 1045 aa12.26□□□□□ -0.45
UBR4-205ENST00000417040 YTHDF3Q7Z739 585 aaKnown RBP12.26□□□□□ -0.45
UBR4-205ENST00000417040 DPP10Q8N608 796 aa12.26□□□□□ -0.45
UBR4-205ENST00000417040 ST13P5Q8NFI4 369 aaPredicted RBP12.26□□□□□ -0.45
UBR4-205ENST00000417040 TRIM63Q969Q1 353 aa12.26□□□□□ -0.45
UBR4-205ENST00000417040 GINS4Q9BRT9 223 aa12.26□□□□□ -0.45
UBR4-205ENST00000417040 ALG9Q9H6U8 611 aa12.26□□□□□ -0.45
UBR4-205ENST00000417040 TRMT13Q9NUP7 481 aaKnown RBP12.26□□□□□ -0.45
UBR4-205ENST00000417040 ARL8BQ9NVJ2 186 aa12.26□□□□□ -0.45
UBR4-205ENST00000417040 N6AMT1Q9Y5N5 214 aa12.26□□□□□ -0.45
UBR4-205ENST00000417040 RNF17Q9BXT8 1623 aaKnown RBP12.26□□□□□ -0.45
UBR4-205ENST00000417040 SERPINH1P50454 418 aaKnown RBP12.26□□□□□ -0.45
UBR4-205ENST00000417040 MYBPC2Q14324 1141 aa12.26□□□□□ -0.45
UBR4-205ENST00000417040 PYDC2Q56P42 97 aa12.26□□□□□ -0.45
UBR4-205ENST00000417040 MTX3Q5HYI7 312 aa12.26□□□□□ -0.45
UBR4-205ENST00000417040 HHIPL2Q6UWX4 724 aa12.26□□□□□ -0.45
UBR4-205ENST00000417040 MILR1Q7Z6M3 343 aa12.26□□□□□ -0.45
UBR4-205ENST00000417040 CD302Q8IX05 232 aa12.26□□□□□ -0.45
UBR4-205ENST00000417040 NDNQ99608 321 aa12.26□□□□□ -0.45
UBR4-205ENST00000417040 MIEF1Q9NQG6 463 aa12.26□□□□□ -0.45
UBR4-205ENST00000417040 DYRK1BQ9Y463 629 aa12.26□□□□□ -0.45
UBR4-205ENST00000417040 RAD54BQ9Y620 910 aa12.26□□□□□ -0.45
UBR4-205ENST00000417040 UNC13BO14795 1591 aa12.26□□□□□ -0.45
UBR4-205ENST00000417040 SLC12A8A0AV02 714 aa12.26□□□□□ -0.45
UBR4-205ENST00000417040 FAM220BPB1ANY3 271 aa12.26□□□□□ -0.45
UBR4-205ENST00000417040 IDH3BO43837 385 aa12.26□□□□□ -0.45
UBR4-205ENST00000417040 CRTAMO95727 393 aa12.26□□□□□ -0.45
UBR4-205ENST00000417040 TNFRSF8P28908 595 aa12.26□□□□□ -0.45
UBR4-205ENST00000417040 GSTCDQ8NEC7 633 aa12.26□□□□□ -0.45
UBR4-205ENST00000417040 UGT2B28Q9BY64 529 aa12.26□□□□□ -0.45
UBR4-205ENST00000417040 ZNF518BQ9C0D4 1074 aa12.26□□□□□ -0.45
UBR4-205ENST00000417040 PCDHB7Q9Y5E2 793 aa12.26□□□□□ -0.45
UBR4-205ENST00000417040 KRT6BP04259 564 aa12.26□□□□□ -0.45
UBR4-205ENST00000417040 NFICP08651 508 aa12.26□□□□□ -0.45
UBR4-205ENST00000417040 CNPP09543 421 aaKnown RBP12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms