RNA–Protein interactions for RNA: ENST00000416769.2

LINC00339-202, long intergenic non-protein coding RNA 339, humanhuman

TSL 1 (best) BASIC

Gene LINC00339, Length 1,077 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-202ENST00000416769 GRK6P43250 576 aa13.39□□□□□ -0.27
LINC00339-202ENST00000416769 BCAT1P54687 386 aa13.39□□□□□ -0.27
LINC00339-202ENST00000416769 GALCP54803 685 aa13.39□□□□□ -0.27
LINC00339-202ENST00000416769 DAOAP59103 153 aa13.39□□□□□ -0.27
LINC00339-202ENST00000416769 TPM4P67936 248 aa13.39□□□□□ -0.27
LINC00339-202ENST00000416769 TEAD4Q15561 434 aa13.39□□□□□ -0.27
LINC00339-202ENST00000416769 PKDCCQ504Y2 493 aa13.39□□□□□ -0.27
LINC00339-202ENST00000416769 DCAF17Q5H9S7 520 aaPredicted RBP13.39□□□□□ -0.27
LINC00339-202ENST00000416769 CDKAL1Q5VV42 579 aa13.39□□□□□ -0.27
LINC00339-202ENST00000416769 ZNF776Q68DI1 518 aaPredicted RBP13.39□□□□□ -0.27
LINC00339-202ENST00000416769 PMF1Q6P1K2 205 aa13.39□□□□□ -0.27
LINC00339-202ENST00000416769 LUZP1Q86V48 1076 aa13.39□□□□□ -0.27
LINC00339-202ENST00000416769 CFAP52Q8N1V2 620 aa13.39□□□□□ -0.27
LINC00339-202ENST00000416769 ADAM32Q8TC27 787 aa13.39□□□□□ -0.27
LINC00339-202ENST00000416769 GANCQ8TET4 914 aa13.39□□□□□ -0.27
LINC00339-202ENST00000416769 RNF139Q8WU17 664 aa13.39□□□□□ -0.27
LINC00339-202ENST00000416769 NUCKS1Q9H1E3 243 aaKnown RBP13.39□□□□□ -0.27
LINC00339-202ENST00000416769 PCED1AQ9H1Q7 454 aa13.39□□□□□ -0.27
LINC00339-202ENST00000416769 RSPH9Q9H1X1 276 aaPredicted RBP13.39□□□□□ -0.27
LINC00339-202ENST00000416769 NEUROG2Q9H2A3 272 aa13.39□□□□□ -0.27
LINC00339-202ENST00000416769 FBXL12Q9NXK8 326 aa13.39□□□□□ -0.27
LINC00339-202ENST00000416769 DKK4Q9UBT3 224 aa13.39□□□□□ -0.27
LINC00339-202ENST00000416769 FTSJ1Q9UET6 329 aa13.39□□□□□ -0.27
LINC00339-202ENST00000416769 PLA2G4CQ9UP65 541 aa13.39□□□□□ -0.27
LINC00339-202ENST00000416769 HBS1LQ9Y450 684 aaKnown RBP13.39□□□□□ -0.27
LINC00339-202ENST00000416769 RAI2Q9Y5P3 530 aa13.39□□□□□ -0.27
LINC00339-202ENST00000416769 A0A087WV48 116 aa13.38□□□□□ -0.27
LINC00339-202ENST00000416769 LRRC10BA6NIK2 292 aa13.38□□□□□ -0.27
LINC00339-202ENST00000416769 RNF225M0QZC1 329 aaPredicted RBP13.38□□□□□ -0.27
LINC00339-202ENST00000416769 FYNP06241 537 aa13.38□□□□□ -0.27
LINC00339-202ENST00000416769 VAV1P15498 845 aa13.38□□□□□ -0.27
LINC00339-202ENST00000416769 ZNF18P17022 549 aa13.38□□□□□ -0.27
LINC00339-202ENST00000416769 CDK11BP21127 795 aaKnown RBP13.38□□□□□ -0.27
LINC00339-202ENST00000416769 EEF1GP26641 437 aaKnown RBP13.38□□□□□ -0.27
LINC00339-202ENST00000416769 PPP2CBP62714 309 aa13.38□□□□□ -0.27
LINC00339-202ENST00000416769 PPP2CAP67775 309 aa13.38□□□□□ -0.27
LINC00339-202ENST00000416769 BST2Q10589 180 aaKnown RBP13.38□□□□□ -0.27
LINC00339-202ENST00000416769 CUL2Q13617 745 aa13.38□□□□□ -0.27
LINC00339-202ENST00000416769 CCDC40Q4G0X9 1142 aa13.38□□□□□ -0.27
LINC00339-202ENST00000416769 SGO2Q562F6 1265 aa13.38□□□□□ -0.27
LINC00339-202ENST00000416769 ADAT2Q7Z6V5 191 aaKnown RBP13.38□□□□□ -0.27
LINC00339-202ENST00000416769 MMAAQ8IVH4 418 aaKnown RBP13.38□□□□□ -0.27
LINC00339-202ENST00000416769 SIX6OS1Q8N1H7 587 aa13.38□□□□□ -0.27
LINC00339-202ENST00000416769 AADATQ8N5Z0 425 aa13.38□□□□□ -0.27
LINC00339-202ENST00000416769 CCDC150Q8NCX0 1101 aa13.38□□□□□ -0.27
LINC00339-202ENST00000416769 RBSNQ9H1K0 784 aa13.38□□□□□ -0.27
LINC00339-202ENST00000416769 HSD3B7Q9H2F3 369 aa13.38□□□□□ -0.27
LINC00339-202ENST00000416769 OSGEPQ9NPF4 335 aa13.38□□□□□ -0.27
LINC00339-202ENST00000416769 ARMCX3Q9UH62 379 aaPredicted RBP13.38□□□□□ -0.27
LINC00339-202ENST00000416769 COL5A1P20908 1838 aaPredicted RBP13.37□□□□□ -0.27
LINC00339-202ENST00000416769 A0A1W2PPC4 97 aa13.37□□□□□ -0.27
LINC00339-202ENST00000416769 A0A1W2PR77 199 aa13.37□□□□□ -0.27
LINC00339-202ENST00000416769 C10orf142B7Z368 130 aa13.37□□□□□ -0.27
LINC00339-202ENST00000416769 VILLO15195 856 aa13.37□□□□□ -0.27
LINC00339-202ENST00000416769 RNASEH2AO75792 299 aaKnown RBP13.37□□□□□ -0.27
LINC00339-202ENST00000416769 POLR2EP19388 210 aaKnown RBP13.37□□□□□ -0.27
LINC00339-202ENST00000416769 BRD2P25440 801 aaKnown RBP13.37□□□□□ -0.27
LINC00339-202ENST00000416769 GTF2H1P32780 548 aa13.37□□□□□ -0.27
LINC00339-202ENST00000416769 PSMD8P48556 350 aa13.37□□□□□ -0.27
LINC00339-202ENST00000416769 STK19P49842 368 aaPredicted RBP13.37□□□□□ -0.27
LINC00339-202ENST00000416769 BNIP3Q12983 259 aa13.37□□□□□ -0.27
LINC00339-202ENST00000416769 SUZ12Q15022 739 aaKnown RBP13.37□□□□□ -0.27
LINC00339-202ENST00000416769 CST6Q15828 149 aa13.37□□□□□ -0.27
LINC00339-202ENST00000416769 TTC31Q49AM3 519 aaPredicted RBP13.37□□□□□ -0.27
LINC00339-202ENST00000416769 TCP11X2Q5H9J9 407 aa13.37□□□□□ -0.27
LINC00339-202ENST00000416769 C9orf64Q5T6V5 341 aa13.37□□□□□ -0.27
LINC00339-202ENST00000416769 TCERG1LQ5VWI1 586 aa13.37□□□□□ -0.27
LINC00339-202ENST00000416769 MSANTD2Q6P1R3 559 aa13.37□□□□□ -0.27
LINC00339-202ENST00000416769 CREBRFQ8IUR6 639 aa13.37□□□□□ -0.27
LINC00339-202ENST00000416769 MFN1Q8IWA4 741 aa13.37□□□□□ -0.27
LINC00339-202ENST00000416769 APCDD1Q8J025 514 aa13.37□□□□□ -0.27
LINC00339-202ENST00000416769 GALNT15Q8N3T1 639 aa13.37□□□□□ -0.27
LINC00339-202ENST00000416769 CARNMT1Q8N4J0 409 aa13.37□□□□□ -0.27
LINC00339-202ENST00000416769 EID2Q8N6I1 236 aa13.37□□□□□ -0.27
LINC00339-202ENST00000416769 FCRL2Q96LA5 508 aaPredicted RBP13.37□□□□□ -0.27
LINC00339-202ENST00000416769 SGK2Q9HBY8 427 aa13.37□□□□□ -0.27
LINC00339-202ENST00000416769 OLA1Q9NTK5 396 aaKnown RBP13.37□□□□□ -0.27
LINC00339-202ENST00000416769 SLCO3A1Q9UIG8 710 aa13.37□□□□□ -0.27
LINC00339-202ENST00000416769 CA5BQ9Y2D0 317 aa13.37□□□□□ -0.27
LINC00339-202ENST00000416769 ENC1O14682 589 aa13.36□□□□□ -0.27
LINC00339-202ENST00000416769 ACSL4O60488 711 aa13.36□□□□□ -0.27
LINC00339-202ENST00000416769 MOCS2O96007 188 aaPredicted RBP13.36□□□□□ -0.27
LINC00339-202ENST00000416769 PRKCSHP14314 528 aaPredicted RBP13.36□□□□□ -0.27
LINC00339-202ENST00000416769 EIF2S3P41091 472 aaKnown RBP13.36□□□□□ -0.27
LINC00339-202ENST00000416769 ACADVLP49748 655 aa13.36□□□□□ -0.27
LINC00339-202ENST00000416769 C21orf59P57076 290 aa13.36□□□□□ -0.27
LINC00339-202ENST00000416769 TBX4P57082 545 aa13.36□□□□□ -0.27
LINC00339-202ENST00000416769 RACK1P63244 317 aaKnown RBP13.36□□□□□ -0.27
LINC00339-202ENST00000416769 PITX1P78337 314 aaPredicted RBP13.36□□□□□ -0.27
LINC00339-202ENST00000416769 SEMG2Q02383 582 aa13.36□□□□□ -0.27
LINC00339-202ENST00000416769 HNRNPA1L2Q32P51 320 aaKnown RBP13.36□□□□□ -0.27
LINC00339-202ENST00000416769 PITRM1Q5JRX3 1037 aa13.36□□□□□ -0.27
LINC00339-202ENST00000416769 CIR1Q86X95 450 aaPredicted RBP13.36□□□□□ -0.27
LINC00339-202ENST00000416769 TRIM59Q8IWR1 403 aa13.36□□□□□ -0.27
LINC00339-202ENST00000416769 STK40Q8N2I9 435 aa13.36□□□□□ -0.27
LINC00339-202ENST00000416769 PDCD7Q8N8D1 485 aaKnown RBP13.36□□□□□ -0.27
LINC00339-202ENST00000416769 RNF214Q8ND24 703 aa13.36□□□□□ -0.27
LINC00339-202ENST00000416769 ANKRD20A12PQ8NF67 263 aa13.36□□□□□ -0.27
LINC00339-202ENST00000416769 DQX1Q8TE96 717 aaKnown RBP13.36□□□□□ -0.27
LINC00339-202ENST00000416769 SAP25Q8TEE9 199 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms