RNA–Protein interactions for RNA: ENST00000416108.5

RBM39-208, Transcript of RNA binding motif protein 39, humanhuman

TSL 4

Gene RBM39, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-208ENST00000416108 C8orf74Q6P047 294 aa8.64□□□□□ -1.03
RBM39-208ENST00000416108 DARS2Q6PI48 645 aaKnown RBP8.64□□□□□ -1.03
RBM39-208ENST00000416108 CCDC137Q6PK04 289 aaKnown RBP8.64□□□□□ -1.03
RBM39-208ENST00000416108 NPNTQ6UXI9 565 aa8.64□□□□□ -1.03
RBM39-208ENST00000416108 TPGS1Q6ZTW0 290 aa8.64□□□□□ -1.03
RBM39-208ENST00000416108 GSTA5Q7RTV2 222 aa8.64□□□□□ -1.03
RBM39-208ENST00000416108 ZNF572Q7Z3I7 529 aaPredicted RBP8.64□□□□□ -1.03
RBM39-208ENST00000416108 ANKS1BQ7Z6G8 1248 aa8.64□□□□□ -1.03
RBM39-208ENST00000416108 TFAP2DQ7Z6R9 452 aa8.64□□□□□ -1.03
RBM39-208ENST00000416108 FAM217AQ8IXS0 508 aa8.64□□□□□ -1.03
RBM39-208ENST00000416108 CFAP52Q8N1V2 620 aa8.64□□□□□ -1.03
RBM39-208ENST00000416108 CARNMT1Q8N4J0 409 aa8.64□□□□□ -1.03
RBM39-208ENST00000416108 ATPAF2Q8N5M1 289 aa8.64□□□□□ -1.03
RBM39-208ENST00000416108 PLD5Q8N7P1 536 aa8.64□□□□□ -1.03
RBM39-208ENST00000416108 ZNF557Q8N988 423 aaPredicted RBP8.64□□□□□ -1.03
RBM39-208ENST00000416108 C12orf50Q8NA57 414 aaPredicted RBP8.64□□□□□ -1.03
RBM39-208ENST00000416108 DEPDC1BQ8WUY9 529 aa8.64□□□□□ -1.03
RBM39-208ENST00000416108 C1orf54Q8WWF1 131 aa8.64□□□□□ -1.03
RBM39-208ENST00000416108 HLA-CQ95604 372 aa8.64□□□□□ -1.03
RBM39-208ENST00000416108 IGSF8Q969P0 613 aa8.64□□□□□ -1.03
RBM39-208ENST00000416108 GUCD1Q96NT3 240 aa8.64□□□□□ -1.03
RBM39-208ENST00000416108 MYADMQ96S97 322 aa8.64□□□□□ -1.03
RBM39-208ENST00000416108 KRT12Q99456 494 aa8.64□□□□□ -1.03
RBM39-208ENST00000416108 HERPUD2Q9BSE4 406 aa8.64□□□□□ -1.03
RBM39-208ENST00000416108 RBM12Q9NTZ6 932 aaKnown RBP8.64□□□□□ -1.03
RBM39-208ENST00000416108 TMEM248Q9NWD8 314 aa8.64□□□□□ -1.03
RBM39-208ENST00000416108 MPP6Q9NZW5 540 aa8.64□□□□□ -1.03
RBM39-208ENST00000416108 STOML2Q9UJZ1 356 aa8.64□□□□□ -1.03
RBM39-208ENST00000416108 ZNF148Q9UQR1 794 aa8.64□□□□□ -1.03
RBM39-208ENST00000416108 CFAP69A5D8W1 941 aa8.63□□□□□ -1.03
RBM39-208ENST00000416108 ARHGAP42A6NI28 874 aa8.63□□□□□ -1.03
RBM39-208ENST00000416108 EFCAB8A8MWE9 144 aa8.63□□□□□ -1.03
RBM39-208ENST00000416108 HACD1B0YJ81 288 aa8.63□□□□□ -1.03
RBM39-208ENST00000416108 SGK1O00141 431 aa8.63□□□□□ -1.03
RBM39-208ENST00000416108 DFFAO00273 331 aa8.63□□□□□ -1.03
RBM39-208ENST00000416108 LIASO43766 372 aa8.63□□□□□ -1.03
RBM39-208ENST00000416108 RAMP2O60895 175 aa8.63□□□□□ -1.03
RBM39-208ENST00000416108 NEBLO76041 1014 aa8.63□□□□□ -1.03
RBM39-208ENST00000416108 CNTN5O94779 1100 aa8.63□□□□□ -1.03
RBM39-208ENST00000416108 STK10O94804 968 aaKnown RBP8.63□□□□□ -1.03
RBM39-208ENST00000416108 LUC7L3O95232 432 aaKnown RBP8.63□□□□□ -1.03
RBM39-208ENST00000416108 GAS8O95995 478 aa8.63□□□□□ -1.03
RBM39-208ENST00000416108 ADH1CP00326 375 aa8.63□□□□□ -1.03
RBM39-208ENST00000416108 RBP3P10745 1247 aa8.63□□□□□ -1.03
RBM39-208ENST00000416108 LAMP2P13473 410 aa8.63□□□□□ -1.03
RBM39-208ENST00000416108 PECAM1P16284 738 aaPredicted RBP8.63□□□□□ -1.03
RBM39-208ENST00000416108 COILP38432 576 aaPredicted RBP8.63□□□□□ -1.03
RBM39-208ENST00000416108 VIPR2P41587 438 aa8.63□□□□□ -1.03
RBM39-208ENST00000416108 NDST2P52849 883 aa8.63□□□□□ -1.03
RBM39-208ENST00000416108 RPS24P62847 133 aaKnown RBP8.63□□□□□ -1.03
RBM39-208ENST00000416108 ZXDBP98169 803 aa8.63□□□□□ -1.03
RBM39-208ENST00000416108 GBE1Q04446 702 aa8.63□□□□□ -1.03
RBM39-208ENST00000416108 ADCY2Q08462 1091 aa8.63□□□□□ -1.03
RBM39-208ENST00000416108 NR1H3Q13133 447 aa8.63□□□□□ -1.03
RBM39-208ENST00000416108 XRCC4Q13426 336 aa8.63□□□□□ -1.03
RBM39-208ENST00000416108 BYSLQ13895 437 aaKnown RBP8.63□□□□□ -1.03
RBM39-208ENST00000416108 DHX34Q14147 1143 aaKnown RBP8.63□□□□□ -1.03
RBM39-208ENST00000416108 PDGFRLQ15198 375 aa8.63□□□□□ -1.03
RBM39-208ENST00000416108 PPP1R7Q15435 360 aa8.63□□□□□ -1.03
RBM39-208ENST00000416108 CYP1B1Q16678 543 aa8.63□□□□□ -1.03
RBM39-208ENST00000416108 ANO4Q32M45 955 aa8.63□□□□□ -1.03
RBM39-208ENST00000416108 PUS10Q3MIT2 529 aaKnown RBP8.63□□□□□ -1.03
RBM39-208ENST00000416108 ALFQ53S48 1182 aa8.63□□□□□ -1.03
RBM39-208ENST00000416108 HEATR6Q6AI08 1181 aaKnown RBP8.63□□□□□ -1.03
RBM39-208ENST00000416108 TIGD7Q6NT04 549 aaPredicted RBP8.63□□□□□ -1.03
RBM39-208ENST00000416108 MAATS1Q7Z4T9 603 aa8.63□□□□□ -1.03
RBM39-208ENST00000416108 SETD3Q86TU7 594 aaPredicted RBP8.63□□□□□ -1.03
RBM39-208ENST00000416108 ZC3H18Q86VM9 953 aaKnown RBP8.63□□□□□ -1.03
RBM39-208ENST00000416108 CIR1Q86X95 450 aaPredicted RBP8.63□□□□□ -1.03
RBM39-208ENST00000416108 MFN1Q8IWA4 741 aa8.63□□□□□ -1.03
RBM39-208ENST00000416108 ZNF683Q8IZ20 524 aa8.63□□□□□ -1.03
RBM39-208ENST00000416108 PLCD3Q8N3E9 789 aa8.63□□□□□ -1.03
RBM39-208ENST00000416108 CPA6Q8N4T0 437 aa8.63□□□□□ -1.03
RBM39-208ENST00000416108 PRELID2Q8N945 189 aa8.63□□□□□ -1.03
RBM39-208ENST00000416108 CCNYQ8ND76 341 aa8.63□□□□□ -1.03
RBM39-208ENST00000416108 NSMCE1Q8WV22 266 aa8.63□□□□□ -1.03
RBM39-208ENST00000416108 OSCP1Q8WVF1 389 aa8.63□□□□□ -1.03
RBM39-208ENST00000416108 TFB1MQ8WVM0 346 aaKnown RBP8.63□□□□□ -1.03
RBM39-208ENST00000416108 RSAD2Q8WXG1 361 aa8.63□□□□□ -1.03
RBM39-208ENST00000416108 ATG4AQ8WYN0 398 aa8.63□□□□□ -1.03
RBM39-208ENST00000416108 SUSD6Q92537 303 aa8.63□□□□□ -1.03
RBM39-208ENST00000416108 UBXN4Q92575 508 aa8.63□□□□□ -1.03
RBM39-208ENST00000416108 ATP2A3Q93084 1043 aa8.63□□□□□ -1.03
RBM39-208ENST00000416108 ELSPBP1Q96BH3 223 aa8.63□□□□□ -1.03
RBM39-208ENST00000416108 CELF6Q96J87 481 aaKnown RBP8.63□□□□□ -1.03
RBM39-208ENST00000416108 PRICKLE1Q96MT3 831 aaPredicted RBP8.63□□□□□ -1.03
RBM39-208ENST00000416108 XPO6Q96QU8 1125 aaKnown RBP8.63□□□□□ -1.03
RBM39-208ENST00000416108 FAM118BQ9BPY3 351 aa8.63□□□□□ -1.03
RBM39-208ENST00000416108 BBS2Q9BXC9 721 aa8.63□□□□□ -1.03
RBM39-208ENST00000416108 BRD8Q9H0E9 1235 aa8.63□□□□□ -1.03
RBM39-208ENST00000416108 DDX47Q9H0S4 455 aaKnown RBP8.63□□□□□ -1.03
RBM39-208ENST00000416108 LRRC19Q9H756 370 aa8.63□□□□□ -1.03
RBM39-208ENST00000416108 SP110Q9HB58 689 aa8.63□□□□□ -1.03
RBM39-208ENST00000416108 TRPV4Q9HBA0 871 aa8.63□□□□□ -1.03
RBM39-208ENST00000416108 SPHK2Q9NRA0 654 aa8.63□□□□□ -1.03
RBM39-208ENST00000416108 ETNK2Q9NVF9 386 aa8.63□□□□□ -1.03
RBM39-208ENST00000416108 HPCAL4Q9UM19 191 aa8.63□□□□□ -1.03
RBM39-208ENST00000416108 R3HDM2Q9Y2K5 976 aaKnown RBP8.63□□□□□ -1.03
RBM39-208ENST00000416108 NR2E1Q9Y466 385 aa8.63□□□□□ -1.03
RBM39-208ENST00000416108 WNT6Q9Y6F9 365 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms