RNA–Protein interactions for RNA: ENST00000412061.3

BRCA1-204, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,312 nt, Biotype non stop decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-204ENST00000412061 ZCCHC10Q8TBK6 192 aa4.85□□□□□ -1.63
BRCA1-204ENST00000412061 CACTINQ8WUQ7 758 aaKnown RBP4.85□□□□□ -1.63
BRCA1-204ENST00000412061 LPIN2Q92539 896 aa4.85□□□□□ -1.63
BRCA1-204ENST00000412061 NCSTNQ92542 709 aa4.85□□□□□ -1.63
BRCA1-204ENST00000412061 HAS1Q92839 578 aa4.85□□□□□ -1.63
BRCA1-204ENST00000412061 CCDC47Q96A33 483 aaKnown RBP4.85□□□□□ -1.63
BRCA1-204ENST00000412061 LENG9Q96B70 501 aa4.85□□□□□ -1.63
BRCA1-204ENST00000412061 ZNF845Q96IR2 970 aaPredicted RBP4.85□□□□□ -1.63
BRCA1-204ENST00000412061 VN1R3Q9BXE9 311 aa4.85□□□□□ -1.63
BRCA1-204ENST00000412061 TAOK3Q9H2K8 898 aa4.85□□□□□ -1.63
BRCA1-204ENST00000412061 NRDE2Q9H7Z3 1164 aa4.85□□□□□ -1.63
BRCA1-204ENST00000412061 GLOD4Q9HC38 313 aa4.85□□□□□ -1.63
BRCA1-204ENST00000412061 MORF4L1Q9UBU8 362 aa4.85□□□□□ -1.63
BRCA1-204ENST00000412061 PA2G4Q9UQ80 394 aaKnown RBP4.85□□□□□ -1.63
BRCA1-204ENST00000412061 ZFP37Q9Y6Q3 630 aaPredicted RBP4.85□□□□□ -1.63
BRCA1-204ENST00000412061 CENPVL1A0A0U1RR11 272 aa4.84□□□□□ -1.63
BRCA1-204ENST00000412061 ZAR1LA6NP61 321 aa4.84□□□□□ -1.63
BRCA1-204ENST00000412061 A8MV72 311 aaPredicted RBP4.84□□□□□ -1.63
BRCA1-204ENST00000412061 AGPSO00116 658 aa4.84□□□□□ -1.63
BRCA1-204ENST00000412061 SEPT4O43236 478 aa4.84□□□□□ -1.63
BRCA1-204ENST00000412061 DHHO43323 396 aa4.84□□□□□ -1.63
BRCA1-204ENST00000412061 PROM1O43490 865 aa4.84□□□□□ -1.63
BRCA1-204ENST00000412061 ADAM20O43506 726 aa4.84□□□□□ -1.63
BRCA1-204ENST00000412061 TBX10O75333 385 aa4.84□□□□□ -1.63
BRCA1-204ENST00000412061 LARGE1O95461 756 aa4.84□□□□□ -1.63
BRCA1-204ENST00000412061 AFPP02771 609 aaKnown RBP4.84□□□□□ -1.63
BRCA1-204ENST00000412061 PDHA1P08559 390 aa4.84□□□□□ -1.63
BRCA1-204ENST00000412061 QDPRP09417 244 aa4.84□□□□□ -1.63
BRCA1-204ENST00000412061 ITGAMP11215 1152 aa4.84□□□□□ -1.63
BRCA1-204ENST00000412061 RARGP13631 454 aa4.84□□□□□ -1.63
BRCA1-204ENST00000412061 STMN1P16949 149 aa4.84□□□□□ -1.63
BRCA1-204ENST00000412061 ATP5F1P24539 256 aaPredicted RBP4.84□□□□□ -1.63
BRCA1-204ENST00000412061 PRKCHP24723 683 aa4.84□□□□□ -1.63
BRCA1-204ENST00000412061 YY1P25490 414 aa4.84□□□□□ -1.63
BRCA1-204ENST00000412061 NTSR1P30989 418 aa4.84□□□□□ -1.63
BRCA1-204ENST00000412061 PPARGP37231 505 aaPredicted RBP4.84□□□□□ -1.63
BRCA1-204ENST00000412061 PSMB10P40306 273 aa4.84□□□□□ -1.63
BRCA1-204ENST00000412061 CDK7P50613 346 aa4.84□□□□□ -1.63
BRCA1-204ENST00000412061 TIRAPP58753 221 aa4.84□□□□□ -1.63
BRCA1-204ENST00000412061 PSMC6P62333 389 aa4.84□□□□□ -1.63
BRCA1-204ENST00000412061 SP2Q02086 613 aa4.84□□□□□ -1.63
BRCA1-204ENST00000412061 EFEMP1Q12805 493 aa4.84□□□□□ -1.63
BRCA1-204ENST00000412061 CSHL1Q14406 222 aa4.84□□□□□ -1.63
BRCA1-204ENST00000412061 MED22Q15528 200 aa4.84□□□□□ -1.63
BRCA1-204ENST00000412061 KYNUQ16719 465 aa4.84□□□□□ -1.63
BRCA1-204ENST00000412061 MMEL1Q495T6 779 aa4.84□□□□□ -1.63
BRCA1-204ENST00000412061 SPATS1Q496A3 300 aa4.84□□□□□ -1.63
BRCA1-204ENST00000412061 ZNF569Q5MCW4 686 aa4.84□□□□□ -1.63
BRCA1-204ENST00000412061 CBWD5Q5RIA9 395 aa4.84□□□□□ -1.63
BRCA1-204ENST00000412061 SLC9A4Q6AI14 798 aa4.84□□□□□ -1.63
BRCA1-204ENST00000412061 VWA1Q6PCB0 445 aa4.84□□□□□ -1.63
BRCA1-204ENST00000412061 SHQ1Q6PI26 577 aaKnown RBP4.84□□□□□ -1.63
BRCA1-204ENST00000412061 KCNV1Q6PIU1 500 aa4.84□□□□□ -1.63
BRCA1-204ENST00000412061 CLEC9AQ6UXN8 241 aa4.84□□□□□ -1.63
BRCA1-204ENST00000412061 NUP93Q8N1F7 819 aa4.84□□□□□ -1.63
BRCA1-204ENST00000412061 FRMD1Q8N878 549 aa4.84□□□□□ -1.63
BRCA1-204ENST00000412061 FSIP1Q8NA03 581 aa4.84□□□□□ -1.63
BRCA1-204ENST00000412061 MYCBPAPQ8TBZ2 947 aa4.84□□□□□ -1.63
BRCA1-204ENST00000412061 GLG1Q92896 1179 aa4.84□□□□□ -1.63
BRCA1-204ENST00000412061 FKBP10Q96AY3 582 aa4.84□□□□□ -1.63
BRCA1-204ENST00000412061 KIF1BPQ96EK5 621 aa4.84□□□□□ -1.63
BRCA1-204ENST00000412061 MCRS1Q96EZ8 462 aa4.84□□□□□ -1.63
BRCA1-204ENST00000412061 PGBD1Q96JS3 809 aa4.84□□□□□ -1.63
BRCA1-204ENST00000412061 LBHD1Q9BQE6 289 aaPredicted RBP4.84□□□□□ -1.63
BRCA1-204ENST00000412061 MAK16Q9BXY0 300 aaKnown RBP4.84□□□□□ -1.63
BRCA1-204ENST00000412061 INTS2Q9H0H0 1204 aaKnown RBP4.84□□□□□ -1.63
BRCA1-204ENST00000412061 C2orf40Q9H1Z8 148 aa4.84□□□□□ -1.63
BRCA1-204ENST00000412061 TTYH1Q9H313 450 aaPredicted RBP4.84□□□□□ -1.63
BRCA1-204ENST00000412061 STN1Q9H668 368 aaKnown RBP4.84□□□□□ -1.63
BRCA1-204ENST00000412061 LIN7CQ9NUP9 197 aaKnown RBP4.84□□□□□ -1.63
BRCA1-204ENST00000412061 ODF2LQ9ULJ1 636 aa4.84□□□□□ -1.63
BRCA1-204ENST00000412061 GDAQ9Y2T3 454 aa4.84□□□□□ -1.63
BRCA1-204ENST00000412061 KNSTRNQ9Y448 316 aa4.84□□□□□ -1.63
BRCA1-204ENST00000412061 FAM169AQ9Y6X4 670 aa4.84□□□□□ -1.63
BRCA1-204ENST00000412061 KDM3AQ9Y4C1 1321 aa4.83□□□□□ -1.64
BRCA1-204ENST00000412061 A1L4Q6 167 aa4.83□□□□□ -1.64
BRCA1-204ENST00000412061 PI4K2BG5E9Z4 385 aa4.83□□□□□ -1.64
BRCA1-204ENST00000412061 PSMD9O00233 223 aa4.83□□□□□ -1.64
BRCA1-204ENST00000412061 TGFB1I1O43294 461 aa4.83□□□□□ -1.64
BRCA1-204ENST00000412061 GOSR1O95249 250 aa4.83□□□□□ -1.64
BRCA1-204ENST00000412061 MT-ND3P03897 115 aa4.83□□□□□ -1.64
BRCA1-204ENST00000412061 ATP5BP06576 529 aaKnown RBP4.83□□□□□ -1.64
BRCA1-204ENST00000412061 WEE2P0C1S8 567 aa4.83□□□□□ -1.64
BRCA1-204ENST00000412061 EGR2P11161 476 aaPredicted RBP4.83□□□□□ -1.64
BRCA1-204ENST00000412061 CD19P15391 556 aa4.83□□□□□ -1.64
BRCA1-204ENST00000412061 CDH15P55291 814 aa4.83□□□□□ -1.64
BRCA1-204ENST00000412061 KRTAP10-2P60368 255 aa4.83□□□□□ -1.64
BRCA1-204ENST00000412061 RBP5P82980 135 aa4.83□□□□□ -1.64
BRCA1-204ENST00000412061 NEXNQ0ZGT2 675 aa4.83□□□□□ -1.64
BRCA1-204ENST00000412061 TBL3Q12788 808 aaKnown RBP4.83□□□□□ -1.64
BRCA1-204ENST00000412061 TFCP2Q12800 502 aa4.83□□□□□ -1.64
BRCA1-204ENST00000412061 EIF2B5Q13144 721 aaKnown RBP4.83□□□□□ -1.64
BRCA1-204ENST00000412061 CLCA4Q14CN2 919 aa4.83□□□□□ -1.64
BRCA1-204ENST00000412061 LY6KQ17RY6 165 aa4.83□□□□□ -1.64
BRCA1-204ENST00000412061 P3H1Q32P28 736 aa4.83□□□□□ -1.64
BRCA1-204ENST00000412061 LY6G5CQ5SRR4 150 aa4.83□□□□□ -1.64
BRCA1-204ENST00000412061 ZNF618Q5T7W0 954 aa4.83□□□□□ -1.64
BRCA1-204ENST00000412061 ABHD17BQ5VST6 288 aa4.83□□□□□ -1.64
BRCA1-204ENST00000412061 DENND5BQ6ZUT9 1274 aa4.83□□□□□ -1.64
BRCA1-204ENST00000412061 RAPH1Q70E73 1250 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms