RNA–Protein interactions for RNA: ENST00000409952.3

LSM5-205, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-205ENST00000409952 CD6P30203 668 aa5.23□□□□□ -1.57
LSM5-205ENST00000409952 PBX1P40424 430 aa5.23□□□□□ -1.57
LSM5-205ENST00000409952 ALDH3A2P51648 485 aa5.23□□□□□ -1.57
LSM5-205ENST00000409952 RCAN1P53805 252 aa5.23□□□□□ -1.57
LSM5-205ENST00000409952 RRADP55042 308 aa5.23□□□□□ -1.57
LSM5-205ENST00000409952 CDH8P55286 799 aa5.23□□□□□ -1.57
LSM5-205ENST00000409952 OLR1P78380 273 aa5.23□□□□□ -1.57
LSM5-205ENST00000409952 HGFACQ04756 655 aa5.23□□□□□ -1.57
LSM5-205ENST00000409952 ZNF844Q08AG5 666 aa5.23□□□□□ -1.57
LSM5-205ENST00000409952 GOLGA8DPQ0D2H9 430 aa5.23□□□□□ -1.57
LSM5-205ENST00000409952 AP1B1Q10567 949 aa5.23□□□□□ -1.57
LSM5-205ENST00000409952 E2F2Q14209 437 aa5.23□□□□□ -1.57
LSM5-205ENST00000409952 E2F5Q15329 346 aa5.23□□□□□ -1.57
LSM5-205ENST00000409952 NOMO2Q5JPE7 1267 aa5.23□□□□□ -1.57
LSM5-205ENST00000409952 TBC1D3GQ6DHY5 549 aa5.23□□□□□ -1.57
LSM5-205ENST00000409952 ISM2Q6H9L7 571 aa5.23□□□□□ -1.57
LSM5-205ENST00000409952 TBC1D3CQ6IPX1 549 aa5.23□□□□□ -1.57
LSM5-205ENST00000409952 KRT80Q6KB66 452 aa5.23□□□□□ -1.57
LSM5-205ENST00000409952 CDC73Q6P1J9 531 aa5.23□□□□□ -1.57
LSM5-205ENST00000409952 CNSTQ6PJW8 725 aa5.23□□□□□ -1.57
LSM5-205ENST00000409952 SLC2A7Q6PXP3 512 aa5.23□□□□□ -1.57
LSM5-205ENST00000409952 TMEM108Q6UXF1 575 aa5.23□□□□□ -1.57
LSM5-205ENST00000409952 SLC30A10Q6XR72 485 aa5.23□□□□□ -1.57
LSM5-205ENST00000409952 USP30Q70CQ3 517 aa5.23□□□□□ -1.57
LSM5-205ENST00000409952 GALNT7Q86SF2 657 aa5.23□□□□□ -1.57
LSM5-205ENST00000409952 TBC1D3Q8IZP1 549 aaPredicted RBP5.23□□□□□ -1.57
LSM5-205ENST00000409952 POC5Q8NA72 575 aa5.23□□□□□ -1.57
LSM5-205ENST00000409952 SPC24Q8NBT2 197 aa5.23□□□□□ -1.57
LSM5-205ENST00000409952 OR14K1Q8NGZ2 314 aa5.23□□□□□ -1.57
LSM5-205ENST00000409952 MOSPD2Q8NHP6 518 aa5.23□□□□□ -1.57
LSM5-205ENST00000409952 GSDMBQ8TAX9 411 aa5.23□□□□□ -1.57
LSM5-205ENST00000409952 POC1BQ8TC44 478 aa5.23□□□□□ -1.57
LSM5-205ENST00000409952 TMEM171Q8WVE6 324 aa5.23□□□□□ -1.57
LSM5-205ENST00000409952 PRPF31Q8WWY3 499 aaKnown RBP5.23□□□□□ -1.57
LSM5-205ENST00000409952 OVCA2Q8WZ82 227 aa5.23□□□□□ -1.57
LSM5-205ENST00000409952 TFAP2CQ92754 450 aa5.23□□□□□ -1.57
LSM5-205ENST00000409952 INTS12Q96CB8 462 aaKnown RBP5.23□□□□□ -1.57
LSM5-205ENST00000409952 RMDN1Q96DB5 314 aa5.23□□□□□ -1.57
LSM5-205ENST00000409952 RNFT2Q96EX2 444 aa5.23□□□□□ -1.57
LSM5-205ENST00000409952 FAR2Q96K12 515 aa5.23□□□□□ -1.57
LSM5-205ENST00000409952 CCDC43Q96MW1 224 aaKnown RBP5.23□□□□□ -1.57
LSM5-205ENST00000409952 WWC2-AS2Q96NR7 200 aa5.23□□□□□ -1.57
LSM5-205ENST00000409952 GBP5Q96PP8 586 aa5.23□□□□□ -1.57
LSM5-205ENST00000409952 ABHD1Q96SE0 405 aa5.23□□□□□ -1.57
LSM5-205ENST00000409952 CITED2Q99967 270 aaPredicted RBP5.23□□□□□ -1.57
LSM5-205ENST00000409952 KLHL4Q9C0H6 718 aa5.23□□□□□ -1.57
LSM5-205ENST00000409952 DNAI2Q9GZS0 605 aa5.23□□□□□ -1.57
LSM5-205ENST00000409952 EPC1Q9H2F5 836 aa5.23□□□□□ -1.57
LSM5-205ENST00000409952 TLR8Q9NR97 1041 aaKnown RBP5.23□□□□□ -1.57
LSM5-205ENST00000409952 PDRG1Q9NUG6 133 aa5.23□□□□□ -1.57
LSM5-205ENST00000409952 SELENONQ9NZV5 590 aa5.23□□□□□ -1.57
LSM5-205ENST00000409952 EIF2B4Q9UI10 523 aaKnown RBP5.23□□□□□ -1.57
LSM5-205ENST00000409952 RAB21Q9UL25 225 aa5.23□□□□□ -1.57
LSM5-205ENST00000409952 PMS2P1A4D2B8 440 aa5.22□□□□□ -1.57
LSM5-205ENST00000409952 NPEPPSL1A6NEC2 478 aa5.22□□□□□ -1.57
LSM5-205ENST00000409952 CHL1O00533 1208 aa5.22□□□□□ -1.57
LSM5-205ENST00000409952 NKX2-8O15522 239 aa5.22□□□□□ -1.57
LSM5-205ENST00000409952 HOXA3O43365 443 aaPredicted RBP5.22□□□□□ -1.57
LSM5-205ENST00000409952 OR2C1O95371 312 aa5.22□□□□□ -1.57
LSM5-205ENST00000409952 CSF1RP07333 972 aa5.22□□□□□ -1.57
LSM5-205ENST00000409952 C1SP09871 688 aa5.22□□□□□ -1.57
LSM5-205ENST00000409952 MYBL1P10243 752 aa5.22□□□□□ -1.57
LSM5-205ENST00000409952 ITGALP20701 1170 aa5.22□□□□□ -1.57
LSM5-205ENST00000409952 CIITAP33076 1130 aa5.22□□□□□ -1.57
LSM5-205ENST00000409952 KIF5BP33176 963 aa5.22□□□□□ -1.57
LSM5-205ENST00000409952 GP5P40197 560 aa5.22□□□□□ -1.57
LSM5-205ENST00000409952 MRPL12P52815 198 aaKnown RBP5.22□□□□□ -1.57
LSM5-205ENST00000409952 RRP1P56182 461 aaKnown RBP5.22□□□□□ -1.57
LSM5-205ENST00000409952 HDAC4P56524 1084 aa5.22□□□□□ -1.57
LSM5-205ENST00000409952 RPL15P61313 204 aaKnown RBP5.22□□□□□ -1.57
LSM5-205ENST00000409952 DDR1Q08345 913 aa5.22□□□□□ -1.57
LSM5-205ENST00000409952 MTAPQ13126 283 aa5.22□□□□□ -1.57
LSM5-205ENST00000409952 ICAM4Q14773 271 aa5.22□□□□□ -1.57
LSM5-205ENST00000409952 SLMAPQ14BN4 828 aa5.22□□□□□ -1.57
LSM5-205ENST00000409952 PCLAFQ15004 111 aa5.22□□□□□ -1.57
LSM5-205ENST00000409952 TBR1Q16650 682 aa5.22□□□□□ -1.57
LSM5-205ENST00000409952 RNF151Q2KHN1 245 aa5.22□□□□□ -1.57
LSM5-205ENST00000409952 ZNF674Q2M3X9 581 aa5.22□□□□□ -1.57
LSM5-205ENST00000409952 RUNDC3AQ59EK9 446 aa5.22□□□□□ -1.57
LSM5-205ENST00000409952 ZMAT1Q5H9K5 638 aa5.22□□□□□ -1.57
LSM5-205ENST00000409952 C9orf152Q5JTZ5 239 aa5.22□□□□□ -1.57
LSM5-205ENST00000409952 RGS7BPQ6MZT1 257 aaPredicted RBP5.22□□□□□ -1.57
LSM5-205ENST00000409952 MTFR2Q6P444 385 aa5.22□□□□□ -1.57
LSM5-205ENST00000409952 ALKBH5Q6P6C2 394 aaKnown RBP5.22□□□□□ -1.57
LSM5-205ENST00000409952 GLB1LQ6UWU2 654 aa5.22□□□□□ -1.57
LSM5-205ENST00000409952 CRELD2Q6UXH1 353 aaPredicted RBP5.22□□□□□ -1.57
LSM5-205ENST00000409952 RRM2BQ7LG56 351 aa5.22□□□□□ -1.57
LSM5-205ENST00000409952 CHST3Q7LGC8 479 aa5.22□□□□□ -1.57
LSM5-205ENST00000409952 ADGRE4PQ86SQ3 457 aa5.22□□□□□ -1.57
LSM5-205ENST00000409952 GGNQ86UU5 652 aa5.22□□□□□ -1.57
LSM5-205ENST00000409952 CIR1Q86X95 450 aaPredicted RBP5.22□□□□□ -1.57
LSM5-205ENST00000409952 METTL23Q86XA0 190 aa5.22□□□□□ -1.57
LSM5-205ENST00000409952 LINC00346Q8IVM7 164 aa5.22□□□□□ -1.57
LSM5-205ENST00000409952 CCAR2Q8N163 923 aaKnown RBP5.22□□□□□ -1.57
LSM5-205ENST00000409952 SYNE4Q8N205 404 aa5.22□□□□□ -1.57
LSM5-205ENST00000409952 SYT2Q8N9I0 419 aaPredicted RBP5.22□□□□□ -1.57
LSM5-205ENST00000409952 TMEM116Q8NCL8 245 aa5.22□□□□□ -1.57
LSM5-205ENST00000409952 SMARCE1Q969G3 411 aa5.22□□□□□ -1.57
LSM5-205ENST00000409952 FAM149B1Q96BN6 582 aa5.22□□□□□ -1.57
LSM5-205ENST00000409952 BORCS6Q96GS4 357 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms