RNA–Protein interactions for RNA: ENST00000409854.5

EPHA4-202, Transcript of EPH receptor A4, humanhuman

TSL 1 (best) BASIC

Gene EPHA4, Length 3,454 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-202ENST00000409854 C11orf91Q3C1V1 193 aa5.67□□□□□ -1.5
EPHA4-202ENST00000409854 ANKRD20A2Q5SQ80 823 aa5.67□□□□□ -1.5
EPHA4-202ENST00000409854 ANKRD20A1Q5TYW2 823 aa5.67□□□□□ -1.5
EPHA4-202ENST00000409854 ANKRD20A3Q5VUR7 823 aa5.67□□□□□ -1.5
EPHA4-202ENST00000409854 NADSYN1Q6IA69 706 aa5.67□□□□□ -1.5
EPHA4-202ENST00000409854 DNAJB7Q7Z6W7 309 aaPredicted RBP5.67□□□□□ -1.5
EPHA4-202ENST00000409854 TMC8Q8IU68 726 aa5.67□□□□□ -1.5
EPHA4-202ENST00000409854 UMODL1-AS1Q8N2C9 162 aa5.67□□□□□ -1.5
EPHA4-202ENST00000409854 MCUQ8NE86 351 aa5.67□□□□□ -1.5
EPHA4-202ENST00000409854 CCDC110Q8TBZ0 833 aa5.67□□□□□ -1.5
EPHA4-202ENST00000409854 LRRN4Q8WUT4 740 aa5.67□□□□□ -1.5
EPHA4-202ENST00000409854 ZNF512Q96ME7 567 aaPredicted RBP5.67□□□□□ -1.5
EPHA4-202ENST00000409854 RBM15Q96T37 977 aaKnown RBP eCLIP5.67□□□□□ -1.5
EPHA4-202ENST00000409854 EMILIN2Q9BXX0 1053 aa5.67□□□□□ -1.5
EPHA4-202ENST00000409854 SIK2Q9H0K1 926 aa5.67□□□□□ -1.5
EPHA4-202ENST00000409854 ZNF334Q9HCZ1 680 aaPredicted RBP5.67□□□□□ -1.5
EPHA4-202ENST00000409854 EIF2B3Q9NR50 452 aaKnown RBP5.67□□□□□ -1.5
EPHA4-202ENST00000409854 TMEM248Q9NWD8 314 aa5.67□□□□□ -1.5
EPHA4-202ENST00000409854 NINJ2Q9NZG7 142 aa5.67□□□□□ -1.5
EPHA4-202ENST00000409854 IGSF9Q9P2J2 1179 aa5.67□□□□□ -1.5
EPHA4-202ENST00000409854 SLC12A6Q9UHW9 1150 aa5.67□□□□□ -1.5
EPHA4-202ENST00000409854 ZMYND8Q9ULU4 1186 aaPredicted RBP5.67□□□□□ -1.5
EPHA4-202ENST00000409854 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.67□□□□□ -1.5
EPHA4-202ENST00000409854 GOLGA8KD6RF30 607 aa5.67□□□□□ -1.5
EPHA4-202ENST00000409854 RNF103O00237 685 aa5.67□□□□□ -1.5
EPHA4-202ENST00000409854 ALOX15BO15296 676 aa5.67□□□□□ -1.5
EPHA4-202ENST00000409854 COQ9O75208 318 aa5.67□□□□□ -1.5
EPHA4-202ENST00000409854 ARHGEF15O94989 841 aa5.67□□□□□ -1.5
EPHA4-202ENST00000409854 METTL18O95568 372 aa5.67□□□□□ -1.5
EPHA4-202ENST00000409854 CXCL14O95715 111 aa5.67□□□□□ -1.5
EPHA4-202ENST00000409854 MOCS2O96007 188 aaPredicted RBP5.67□□□□□ -1.5
EPHA4-202ENST00000409854 RB1P06400 928 aa5.67□□□□□ -1.5
EPHA4-202ENST00000409854 RHOQP17081 205 aa5.67□□□□□ -1.5
EPHA4-202ENST00000409854 PTPN3P26045 913 aa5.67□□□□□ -1.5
EPHA4-202ENST00000409854 FDFT1P37268 417 aa5.67□□□□□ -1.5
EPHA4-202ENST00000409854 MAGEA3P43357 314 aa5.67□□□□□ -1.5
EPHA4-202ENST00000409854 GAD2Q05329 585 aa5.67□□□□□ -1.5
EPHA4-202ENST00000409854 AUHQ13825 339 aaKnown RBP5.67□□□□□ -1.5
EPHA4-202ENST00000409854 ZRSR2Q15696 482 aaKnown RBP5.67□□□□□ -1.5
EPHA4-202ENST00000409854 DENND2CQ68D51 928 aa5.67□□□□□ -1.5
EPHA4-202ENST00000409854 CCDC149Q6ZUS6 474 aa5.67□□□□□ -1.5
EPHA4-202ENST00000409854 ZNF534Q76KX8 674 aa5.67□□□□□ -1.5
EPHA4-202ENST00000409854 MIB1Q86YT6 1006 aa5.67□□□□□ -1.5
EPHA4-202ENST00000409854 GOLGA6L1Q8N7Z2 621 aa5.67□□□□□ -1.5
EPHA4-202ENST00000409854 MRPL43Q8N983 215 aaKnown RBP5.67□□□□□ -1.5
EPHA4-202ENST00000409854 EXOC4Q96A65 974 aa5.67□□□□□ -1.5
EPHA4-202ENST00000409854 ZFRQ96KR1 1074 aaKnown RBP5.67□□□□□ -1.5
EPHA4-202ENST00000409854 TCF25Q9BQ70 676 aa5.67□□□□□ -1.5
EPHA4-202ENST00000409854 WDR83Q9BRX9 315 aaKnown RBP5.67□□□□□ -1.5
EPHA4-202ENST00000409854 KLF16Q9BXK1 252 aaPredicted RBP5.67□□□□□ -1.5
EPHA4-202ENST00000409854 ZYG11BQ9C0D3 744 aa5.67□□□□□ -1.5
EPHA4-202ENST00000409854 NOL6Q9H6R4 1146 aaKnown RBP5.67□□□□□ -1.5
EPHA4-202ENST00000409854 SUDS3Q9H7L9 328 aaPredicted RBP5.67□□□□□ -1.5
EPHA4-202ENST00000409854 TMBIM4Q9HC24 238 aa5.67□□□□□ -1.5
EPHA4-202ENST00000409854 TLR9Q9NR96 1032 aa5.67□□□□□ -1.5
EPHA4-202ENST00000409854 STOML2Q9UJZ1 356 aa5.67□□□□□ -1.5
EPHA4-202ENST00000409854 CACNG3O60359 315 aa5.66□□□□□ -1.5
EPHA4-202ENST00000409854 TCEA3O75764 348 aa5.66□□□□□ -1.5
EPHA4-202ENST00000409854 STK10O94804 968 aaKnown RBP5.66□□□□□ -1.5
EPHA4-202ENST00000409854 LATS1O95835 1130 aa5.66□□□□□ -1.5
EPHA4-202ENST00000409854 SHBGP04278 402 aa5.66□□□□□ -1.5
EPHA4-202ENST00000409854 SRGAP2BP0DMP2 458 aa5.66□□□□□ -1.5
EPHA4-202ENST00000409854 TSHRP16473 764 aa5.66□□□□□ -1.5
EPHA4-202ENST00000409854 CCNCP24863 283 aa5.66□□□□□ -1.5
EPHA4-202ENST00000409854 MAGEA4P43358 317 aa5.66□□□□□ -1.5
EPHA4-202ENST00000409854 CLCN4P51793 760 aa5.66□□□□□ -1.5
EPHA4-202ENST00000409854 NDST2P52849 883 aa5.66□□□□□ -1.5
EPHA4-202ENST00000409854 ARL4CP56559 192 aa5.66□□□□□ -1.5
EPHA4-202ENST00000409854 IFI35P80217 286 aaPredicted RBP5.66□□□□□ -1.5
EPHA4-202ENST00000409854 BASP1P80723 227 aaKnown RBP5.66□□□□□ -1.5
EPHA4-202ENST00000409854 COG7P83436 770 aa5.66□□□□□ -1.5
EPHA4-202ENST00000409854 AP1B1Q10567 949 aa5.66□□□□□ -1.5
EPHA4-202ENST00000409854 CAMK1Q14012 370 aa5.66□□□□□ -1.5
EPHA4-202ENST00000409854 SLC29A2Q14542 456 aa5.66□□□□□ -1.5
EPHA4-202ENST00000409854 HIF1AQ16665 826 aa5.66□□□□□ -1.5
EPHA4-202ENST00000409854 HSP90B2PQ58FF3 399 aa5.66□□□□□ -1.5
EPHA4-202ENST00000409854 FAM133BQ5BKY9 247 aaKnown RBP5.66□□□□□ -1.5
EPHA4-202ENST00000409854 TTMPQ5BVD1 217 aa5.66□□□□□ -1.5
EPHA4-202ENST00000409854 FNBP1LQ5T0N5 605 aa5.66□□□□□ -1.5
EPHA4-202ENST00000409854 FBXL22Q6P050 247 aa5.66□□□□□ -1.5
EPHA4-202ENST00000409854 PPP1R21Q6ZMI0 780 aa5.66□□□□□ -1.5
EPHA4-202ENST00000409854 CENPUQ71F23 418 aa5.66□□□□□ -1.5
EPHA4-202ENST00000409854 TMC7Q7Z402 723 aa5.66□□□□□ -1.5
EPHA4-202ENST00000409854 CCDC25Q86WR0 208 aa5.66□□□□□ -1.5
EPHA4-202ENST00000409854 LRRC49Q8IUZ0 686 aa5.66□□□□□ -1.5
EPHA4-202ENST00000409854 CCDC13Q8IYE1 715 aa5.66□□□□□ -1.5
EPHA4-202ENST00000409854 ZNF567Q8N184 647 aa5.66□□□□□ -1.5
EPHA4-202ENST00000409854 CCDC33Q8N5R6 958 aa5.66□□□□□ -1.5
EPHA4-202ENST00000409854 NETO2Q8NC67 525 aa5.66□□□□□ -1.5
EPHA4-202ENST00000409854 POF1BQ8WVV4 589 aa5.66□□□□□ -1.5
EPHA4-202ENST00000409854 TTC25Q96NG3 672 aa5.66□□□□□ -1.5
EPHA4-202ENST00000409854 SAMD11Q96NU1 681 aa5.66□□□□□ -1.5
EPHA4-202ENST00000409854 RUFY1Q96T51 708 aa5.66□□□□□ -1.5
EPHA4-202ENST00000409854 VAT1Q99536 393 aa5.66□□□□□ -1.5
EPHA4-202ENST00000409854 LBHD1Q9BQE6 289 aaPredicted RBP5.66□□□□□ -1.5
EPHA4-202ENST00000409854 FERMT1Q9BQL6 677 aa5.66□□□□□ -1.5
EPHA4-202ENST00000409854 GORASP1Q9BQQ3 440 aa5.66□□□□□ -1.5
EPHA4-202ENST00000409854 C17orf80Q9BSJ5 609 aa5.66□□□□□ -1.5
EPHA4-202ENST00000409854 RNF38Q9H0F5 515 aa5.66□□□□□ -1.5
EPHA4-202ENST00000409854 ETNK1Q9HBU6 452 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms