RNA–Protein interactions for RNA: ENST00000409627.6

SUMO1-208, Transcript of small ubiquitin-like modifier 1, humanhuman

TSL 3

Gene SUMO1, Length 722 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-208ENST00000409627 DNAJC17Q9NVM6 304 aaKnown RBP17.11■□□□□ 0.33
SUMO1-208ENST00000409627 TMEM248Q9NWD8 314 aa17.11■□□□□ 0.33
SUMO1-208ENST00000409627 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.11■□□□□ 0.33
SUMO1-208ENST00000409627 PACSIN2Q9UNF0 486 aaPredicted RBP17.11■□□□□ 0.33
SUMO1-208ENST00000409627 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.1■□□□□ 0.33
SUMO1-208ENST00000409627 C3orf70A6NLC5 250 aaPredicted RBP17.1■□□□□ 0.33
SUMO1-208ENST00000409627 H0Y626 953 aa17.1■□□□□ 0.33
SUMO1-208ENST00000409627 DDX3YO15523 660 aaKnown RBP17.1■□□□□ 0.33
SUMO1-208ENST00000409627 SLC34A2O95436 690 aa17.1■□□□□ 0.33
SUMO1-208ENST00000409627 CISD3P0C7P0 127 aa17.1■□□□□ 0.33
SUMO1-208ENST00000409627 IL4RP24394 825 aa17.1■□□□□ 0.33
SUMO1-208ENST00000409627 MAPKAPK2P49137 400 aa17.1■□□□□ 0.33
SUMO1-208ENST00000409627 RWDD2BP57060 319 aa17.1■□□□□ 0.33
SUMO1-208ENST00000409627 ZNF177Q13360 481 aaPredicted RBP17.1■□□□□ 0.33
SUMO1-208ENST00000409627 PREPLQ4J6C6 727 aaPredicted RBP17.1■□□□□ 0.33
SUMO1-208ENST00000409627 ZNF569Q5MCW4 686 aa17.1■□□□□ 0.33
SUMO1-208ENST00000409627 TPRG1Q6ZUI0 275 aa17.1■□□□□ 0.33
SUMO1-208ENST00000409627 SETD3Q86TU7 594 aaPredicted RBP17.1■□□□□ 0.33
SUMO1-208ENST00000409627 SUGP1Q8IWZ8 645 aaKnown RBP17.1■□□□□ 0.33
SUMO1-208ENST00000409627 PHTF2Q8N3S3 785 aa17.1■□□□□ 0.33
SUMO1-208ENST00000409627 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.1■□□□□ 0.33
SUMO1-208ENST00000409627 RTL3Q8N8U3 475 aaKnown RBP17.1■□□□□ 0.33
SUMO1-208ENST00000409627 WFDC5Q8TCV5 224 aa17.1■□□□□ 0.33
SUMO1-208ENST00000409627 RBM41Q96IZ5 413 aaKnown RBP17.1■□□□□ 0.33
SUMO1-208ENST00000409627 CALN1Q9BXU9 219 aa17.1■□□□□ 0.33
SUMO1-208ENST00000409627 DONSONQ9NYP3 566 aa17.1■□□□□ 0.33
SUMO1-208ENST00000409627 DEC1Q9P2X7 70 aa17.1■□□□□ 0.33
SUMO1-208ENST00000409627 FBXL21Q9UKT6 434 aa17.1■□□□□ 0.33
SUMO1-208ENST00000409627 CA14Q9ULX7 337 aa17.1■□□□□ 0.33
SUMO1-208ENST00000409627 CLEC4EQ9ULY5 219 aa17.1■□□□□ 0.33
SUMO1-208ENST00000409627 TBC1D30Q9Y2I9 924 aa17.1■□□□□ 0.33
SUMO1-208ENST00000409627 SLC27A6Q9Y2P4 619 aa17.1■□□□□ 0.33
SUMO1-208ENST00000409627 SHISA7A6NL88 538 aa17.09■□□□□ 0.33
SUMO1-208ENST00000409627 PI4K2BG5E9Z4 385 aa17.09■□□□□ 0.33
SUMO1-208ENST00000409627 MAN2B1O00754 1011 aa17.09■□□□□ 0.33
SUMO1-208ENST00000409627 DAPK3O43293 454 aa17.09■□□□□ 0.33
SUMO1-208ENST00000409627 DCXO43602 365 aa17.09■□□□□ 0.33
SUMO1-208ENST00000409627 ZRANB2O95218 330 aaKnown RBP eCLIP17.09■□□□□ 0.33
SUMO1-208ENST00000409627 ERCC2P18074 760 aa17.09■□□□□ 0.33
SUMO1-208ENST00000409627 SLC6A11P48066 632 aa17.09■□□□□ 0.33
SUMO1-208ENST00000409627 DGKGP49619 791 aa17.09■□□□□ 0.33
SUMO1-208ENST00000409627 OXCT1P55809 520 aa17.09■□□□□ 0.33
SUMO1-208ENST00000409627 MMRN1Q13201 1228 aa17.09■□□□□ 0.33
SUMO1-208ENST00000409627 TAZQ16635 292 aa17.09■□□□□ 0.33
SUMO1-208ENST00000409627 ANKRD20A8PQ5CZ79 823 aa17.09■□□□□ 0.33
SUMO1-208ENST00000409627 C6orf118Q5T5N4 469 aa17.09■□□□□ 0.33
SUMO1-208ENST00000409627 GRAMD4Q6IC98 578 aa17.09■□□□□ 0.33
SUMO1-208ENST00000409627 CXorf57Q6NSI4 855 aaKnown RBP17.09■□□□□ 0.33
SUMO1-208ENST00000409627 TXNDC11Q6PKC3 985 aa17.09■□□□□ 0.33
SUMO1-208ENST00000409627 TFAP2DQ7Z6R9 452 aa17.09■□□□□ 0.33
SUMO1-208ENST00000409627 RCOR2Q8IZ40 523 aa17.09■□□□□ 0.33
SUMO1-208ENST00000409627 SLC35F6Q8N357 371 aa17.09■□□□□ 0.33
SUMO1-208ENST00000409627 C17orf53Q8N3J3 647 aaPredicted RBP17.09■□□□□ 0.33
SUMO1-208ENST00000409627 ALG3Q92685 438 aa17.09■□□□□ 0.33
SUMO1-208ENST00000409627 SHDQ96IW2 340 aa17.09■□□□□ 0.33
SUMO1-208ENST00000409627 LMLNQ96KR4 655 aa17.09■□□□□ 0.33
SUMO1-208ENST00000409627 PNKPQ96T60 521 aa17.09■□□□□ 0.33
SUMO1-208ENST00000409627 P2RY13Q9BPV8 354 aa17.09■□□□□ 0.33
SUMO1-208ENST00000409627 ARHGEF4Q9NR80 690 aa17.09■□□□□ 0.33
SUMO1-208ENST00000409627 KIAA1522Q9P206 1035 aaPredicted RBP17.09■□□□□ 0.33
SUMO1-208ENST00000409627 KRBA1A5PL33 1030 aa17.08■□□□□ 0.32
SUMO1-208ENST00000409627 DCLK1O15075 740 aa17.08■□□□□ 0.32
SUMO1-208ENST00000409627 RHOCP08134 193 aa17.08■□□□□ 0.32
SUMO1-208ENST00000409627 HLA-FP30511 346 aa17.08■□□□□ 0.32
SUMO1-208ENST00000409627 OR1E1P30953 314 aa17.08■□□□□ 0.32
SUMO1-208ENST00000409627 GALK1P51570 392 aa17.08■□□□□ 0.32
SUMO1-208ENST00000409627 STARD6P59095 220 aa17.08■□□□□ 0.32
SUMO1-208ENST00000409627 COPS2P61201 443 aa17.08■□□□□ 0.32
SUMO1-208ENST00000409627 SIGLEC14Q08ET2 396 aa17.08■□□□□ 0.32
SUMO1-208ENST00000409627 SLC12A1Q13621 1099 aa17.08■□□□□ 0.32
SUMO1-208ENST00000409627 RPS6KA1Q15418 735 aa17.08■□□□□ 0.32
SUMO1-208ENST00000409627 FSCBQ5H9T9 825 aa17.08■□□□□ 0.32
SUMO1-208ENST00000409627 NAIF1Q69YI7 327 aaPredicted RBP17.08■□□□□ 0.32
SUMO1-208ENST00000409627 ASTLQ6HA08 431 aaPredicted RBP17.08■□□□□ 0.32
SUMO1-208ENST00000409627 MFSD7Q6UXD7 560 aa17.08■□□□□ 0.32
SUMO1-208ENST00000409627 ZNF783Q6ZMS7 281 aa17.08■□□□□ 0.32
SUMO1-208ENST00000409627 SPOCD1Q6ZMY3 1216 aa17.08■□□□□ 0.32
SUMO1-208ENST00000409627 KIAA0907Q7Z7F0 614 aaPredicted RBP17.08■□□□□ 0.32
SUMO1-208ENST00000409627 PCDH19Q8TAB3 1148 aa17.08■□□□□ 0.32
SUMO1-208ENST00000409627 FAM3CQ92520 227 aa17.08■□□□□ 0.32
SUMO1-208ENST00000409627 EDAQ92838 391 aa17.08■□□□□ 0.32
SUMO1-208ENST00000409627 RNF25Q96BH1 459 aaPredicted RBP17.08■□□□□ 0.32
SUMO1-208ENST00000409627 PRDM16Q9HAZ2 1276 aa17.08■□□□□ 0.32
SUMO1-208ENST00000409627 JRKLQ9Y4A0 524 aa17.08■□□□□ 0.32
SUMO1-208ENST00000409627 A0A0A0MRY4 1105 aa17.07■□□□□ 0.32
SUMO1-208ENST00000409627 ILVBLA1L0T0 632 aa17.07■□□□□ 0.32
SUMO1-208ENST00000409627 TRIM24O15164 1050 aa17.07■□□□□ 0.32
SUMO1-208ENST00000409627 KAT7O95251 611 aa17.07■□□□□ 0.32
SUMO1-208ENST00000409627 PABPC1P11940 636 aaKnown RBP17.07■□□□□ 0.32
SUMO1-208ENST00000409627 ALADP13716 330 aa17.07■□□□□ 0.32
SUMO1-208ENST00000409627 AMPD1P23109 780 aa17.07■□□□□ 0.32
SUMO1-208ENST00000409627 CD70P32970 193 aa17.07■□□□□ 0.32
SUMO1-208ENST00000409627 PTPN7P35236 360 aa17.07■□□□□ 0.32
SUMO1-208ENST00000409627 GRIA2P42262 883 aa17.07■□□□□ 0.32
SUMO1-208ENST00000409627 CDKN2BP42772 138 aa17.07■□□□□ 0.32
SUMO1-208ENST00000409627 KDSRQ06136 332 aa17.07■□□□□ 0.32
SUMO1-208ENST00000409627 LMAN2Q12907 356 aa17.07■□□□□ 0.32
SUMO1-208ENST00000409627 PPP2R5EQ16537 467 aa17.07■□□□□ 0.32
SUMO1-208ENST00000409627 TFDP3Q5H9I0 405 aa17.07■□□□□ 0.32
SUMO1-208ENST00000409627 TMEM196Q5HYL7 178 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms