RNA–Protein interactions for RNA: ENST00000409604.1

SNX13-202, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 4,146 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-202ENST00000409604 ATAT1Q5SQI0 421 aa11.68□□□□□ -0.54
SNX13-202ENST00000409604 CROCCP2Q86T23 111 aa11.68□□□□□ -0.54
SNX13-202ENST00000409604 UBA2Q9UBT2 640 aaPredicted RBP11.68□□□□□ -0.54
SNX13-202ENST00000409604 CFAP69A5D8W1 941 aa11.67□□□□□ -0.54
SNX13-202ENST00000409604 APOC4-APOC2K7ER74 178 aa11.67□□□□□ -0.54
SNX13-202ENST00000409604 APOC2P02655 101 aa11.67□□□□□ -0.54
SNX13-202ENST00000409604 CYP3A5P20815 502 aa11.67□□□□□ -0.54
SNX13-202ENST00000409604 SEC13P55735 322 aa11.67□□□□□ -0.54
SNX13-202ENST00000409604 FAM133BQ5BKY9 247 aaKnown RBP11.67□□□□□ -0.54
SNX13-202ENST00000409604 ADCK2Q7Z695 626 aa11.67□□□□□ -0.54
SNX13-202ENST00000409604 C10orf67Q8IYJ2 551 aa11.67□□□□□ -0.54
SNX13-202ENST00000409604 C11orf84Q9BUA3 381 aaPredicted RBP11.67□□□□□ -0.54
SNX13-202ENST00000409604 LHX5Q9H2C1 402 aa11.67□□□□□ -0.54
SNX13-202ENST00000409604 WBP1LQ9NX94 342 aa11.67□□□□□ -0.54
SNX13-202ENST00000409604 ADAM21Q9UKJ8 722 aa11.67□□□□□ -0.54
SNX13-202ENST00000409604 PKP3Q9Y446 797 aa11.67□□□□□ -0.54
SNX13-202ENST00000409604 TEX28O15482 410 aa11.67□□□□□ -0.54
SNX13-202ENST00000409604 PRKCGP05129 697 aa11.67□□□□□ -0.54
SNX13-202ENST00000409604 MMP13P45452 471 aa11.67□□□□□ -0.54
SNX13-202ENST00000409604 FNTAP49354 379 aa11.67□□□□□ -0.54
SNX13-202ENST00000409604 SGO1Q5FBB7 561 aa11.67□□□□□ -0.54
SNX13-202ENST00000409604 FAM126BQ8IXS8 530 aa11.67□□□□□ -0.54
SNX13-202ENST00000409604 GDPD5Q8WTR4 605 aa11.67□□□□□ -0.54
SNX13-202ENST00000409604 KCTD15Q96SI1 283 aaPredicted RBP11.67□□□□□ -0.54
SNX13-202ENST00000409604 NFKBIZQ9BYH8 718 aa11.67□□□□□ -0.54
SNX13-202ENST00000409604 ZYG11BQ9C0D3 744 aa11.67□□□□□ -0.54
SNX13-202ENST00000409604 KLHL14Q9P2G3 628 aa11.67□□□□□ -0.54
SNX13-202ENST00000409604 CTNNAL1Q9UBT7 734 aa11.67□□□□□ -0.54
SNX13-202ENST00000409604 DPP7Q9UHL4 492 aa11.67□□□□□ -0.54
SNX13-202ENST00000409604 GRIN2DO15399 1336 aa11.67□□□□□ -0.54
SNX13-202ENST00000409604 hCG_1818297A0A087WSY0 165 aa11.67□□□□□ -0.54
SNX13-202ENST00000409604 C2CD4BA6NLJ0 364 aa11.67□□□□□ -0.54
SNX13-202ENST00000409604 ADAM12O43184 909 aa11.67□□□□□ -0.54
SNX13-202ENST00000409604 HSPA4LO95757 839 aa11.67□□□□□ -0.54
SNX13-202ENST00000409604 MT-CYBP00156 380 aaPredicted RBP11.67□□□□□ -0.54
SNX13-202ENST00000409604 CYP1A1P04798 512 aaPredicted RBP11.67□□□□□ -0.54
SNX13-202ENST00000409604 CCNB1P14635 433 aa11.67□□□□□ -0.54
SNX13-202ENST00000409604 WARSP23381 471 aaKnown RBP11.67□□□□□ -0.54
SNX13-202ENST00000409604 RENBPP51606 427 aa11.67□□□□□ -0.54
SNX13-202ENST00000409604 EIF3BP55884 814 aaKnown RBP11.67□□□□□ -0.54
SNX13-202ENST00000409604 ASPHQ12797 758 aa11.67□□□□□ -0.54
SNX13-202ENST00000409604 TBC1D1Q86TI0 1168 aaPredicted RBP11.67□□□□□ -0.54
SNX13-202ENST00000409604 KATNAL2Q8IYT4 538 aa11.67□□□□□ -0.54
SNX13-202ENST00000409604 TRIM56Q9BRZ2 755 aaKnown RBP11.67□□□□□ -0.54
SNX13-202ENST00000409604 TASP1Q9H6P5 420 aa11.67□□□□□ -0.54
SNX13-202ENST00000409604 MAN1C1Q9NR34 630 aa11.67□□□□□ -0.54
SNX13-202ENST00000409604 OLA1Q9NTK5 396 aaKnown RBP11.67□□□□□ -0.54
SNX13-202ENST00000409604 ETNK2Q9NVF9 386 aa11.67□□□□□ -0.54
SNX13-202ENST00000409604 CHKBQ9Y259 395 aa11.67□□□□□ -0.54
SNX13-202ENST00000409604 PCDHGC4Q9Y5F7 938 aa11.67□□□□□ -0.54
SNX13-202ENST00000409604 WNT6Q9Y6F9 365 aa11.67□□□□□ -0.54
SNX13-202ENST00000409604 MTMR11A4FU01 709 aa11.67□□□□□ -0.54
SNX13-202ENST00000409604 TBC1D4O60343 1298 aa11.67□□□□□ -0.54
SNX13-202ENST00000409604 GJB5O95377 273 aa11.67□□□□□ -0.54
SNX13-202ENST00000409604 ERVK-10P10266 1014 aa11.67□□□□□ -0.54
SNX13-202ENST00000409604 CAV1Q03135 178 aa11.67□□□□□ -0.54
SNX13-202ENST00000409604 PDAP1Q13442 181 aaKnown RBP11.67□□□□□ -0.54
SNX13-202ENST00000409604 ANKRD20A2Q5SQ80 823 aa11.67□□□□□ -0.54
SNX13-202ENST00000409604 ANKRD20A1Q5TYW2 823 aa11.67□□□□□ -0.54
SNX13-202ENST00000409604 KIAA1324Q6UXG2 1013 aaKnown RBP11.67□□□□□ -0.54
SNX13-202ENST00000409604 CHRDL2Q6WN34 429 aa11.67□□□□□ -0.54
SNX13-202ENST00000409604 ANKS1BQ7Z6G8 1248 aa11.67□□□□□ -0.54
SNX13-202ENST00000409604 CSGALNACT1Q8TDX6 532 aa11.67□□□□□ -0.54
SNX13-202ENST00000409604 P2RY11Q96G91 374 aa11.67□□□□□ -0.54
SNX13-202ENST00000409604 HES6Q96HZ4 224 aa11.67□□□□□ -0.54
SNX13-202ENST00000409604 ADGRA2Q96PE1 1338 aa11.66□□□□□ -0.54
SNX13-202ENST00000409604 SYN3O14994 580 aa11.66□□□□□ -0.54
SNX13-202ENST00000409604 SNX2O60749 519 aa11.66□□□□□ -0.54
SNX13-202ENST00000409604 EFCAB14O75071 495 aa11.66□□□□□ -0.54
SNX13-202ENST00000409604 ANXA9O76027 345 aa11.66□□□□□ -0.54
SNX13-202ENST00000409604 SEC24CP53992 1094 aa11.66□□□□□ -0.54
SNX13-202ENST00000409604 DPYSL3Q14195 570 aa11.66□□□□□ -0.54
SNX13-202ENST00000409604 C16orf46Q6P387 395 aa11.66□□□□□ -0.54
SNX13-202ENST00000409604 SLC26A9Q7LBE3 791 aa11.66□□□□□ -0.54
SNX13-202ENST00000409604 UCMAQ8WVF2 138 aa11.66□□□□□ -0.54
SNX13-202ENST00000409604 EXOC4Q96A65 974 aa11.66□□□□□ -0.54
SNX13-202ENST00000409604 HHIPL1Q96JK4 782 aa11.66□□□□□ -0.54
SNX13-202ENST00000409604 GAS2L1Q99501 681 aaPredicted RBP11.66□□□□□ -0.54
SNX13-202ENST00000409604 KATNBL1Q9H079 304 aa11.66□□□□□ -0.54
SNX13-202ENST00000409604 THG1LQ9NWX6 298 aaKnown RBP11.66□□□□□ -0.54
SNX13-202ENST00000409604 SH3BGRLO75368 114 aa11.66□□□□□ -0.54
SNX13-202ENST00000409604 POLR2EP19388 210 aaKnown RBP11.66□□□□□ -0.54
SNX13-202ENST00000409604 PLA2G4AP47712 749 aa11.66□□□□□ -0.54
SNX13-202ENST00000409604 OLIG2Q13516 323 aa11.66□□□□□ -0.54
SNX13-202ENST00000409604 AUHQ13825 339 aaKnown RBP11.66□□□□□ -0.54
SNX13-202ENST00000409604 PKN2Q16513 984 aaKnown RBP11.66□□□□□ -0.54
SNX13-202ENST00000409604 KLHL38Q2WGJ6 581 aa11.66□□□□□ -0.54
SNX13-202ENST00000409604 BEND6Q5SZJ8 279 aaPredicted RBP11.66□□□□□ -0.54
SNX13-202ENST00000409604 CACNA2D3Q8IZS8 1091 aa11.66□□□□□ -0.54
SNX13-202ENST00000409604 NKX2-4Q9H2Z4 354 aa11.66□□□□□ -0.54
SNX13-202ENST00000409604 ZFP37Q9Y6Q3 630 aaPredicted RBP11.66□□□□□ -0.54
SNX13-202ENST00000409604 HAS3O00219 553 aa11.66□□□□□ -0.54
SNX13-202ENST00000409604 CAND2O75155 1236 aa11.66□□□□□ -0.54
SNX13-202ENST00000409604 KRT4P19013 534 aa11.66□□□□□ -0.54
SNX13-202ENST00000409604 CHKAP35790 457 aa11.66□□□□□ -0.54
SNX13-202ENST00000409604 LHX8Q68G74 356 aa11.66□□□□□ -0.54
SNX13-202ENST00000409604 DET1Q7L5Y6 550 aa11.66□□□□□ -0.54
SNX13-202ENST00000409604 SZRD1Q7Z422 152 aa11.66□□□□□ -0.54
SNX13-202ENST00000409604 NUDCD3Q8IVD9 361 aa11.66□□□□□ -0.54
SNX13-202ENST00000409604 CMTM8Q8IZV2 173 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms