RNA–Protein interactions for RNA: ENST00000409478.5

R3HDM1-202, Transcript of R3H domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene R3HDM1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-202ENST00000409478 MCEEQ96PE7 176 aa5.97□□□□□ -1.45
R3HDM1-202ENST00000409478 ADAMTS10Q9H324 1103 aa5.97□□□□□ -1.45
R3HDM1-202ENST00000409478 CD320Q9NPF0 282 aa5.97□□□□□ -1.45
R3HDM1-202ENST00000409478 COPG2Q9UBF2 871 aa5.97□□□□□ -1.45
R3HDM1-202ENST00000409478 EMCNQ9ULC0 261 aa5.97□□□□□ -1.45
R3HDM1-202ENST00000409478 KMOO15229 486 aa5.96□□□□□ -1.45
R3HDM1-202ENST00000409478 SLC22A1O15245 554 aa5.96□□□□□ -1.45
R3HDM1-202ENST00000409478 GAS7O60861 476 aa5.96□□□□□ -1.45
R3HDM1-202ENST00000409478 CALCAP01258 141 aa5.96□□□□□ -1.45
R3HDM1-202ENST00000409478 BMP2P12643 396 aa5.96□□□□□ -1.45
R3HDM1-202ENST00000409478 ZNF182P17025 639 aaPredicted RBP5.96□□□□□ -1.45
R3HDM1-202ENST00000409478 KRT6CP48668 564 aa5.96□□□□□ -1.45
R3HDM1-202ENST00000409478 CNTN2Q02246 1040 aa5.96□□□□□ -1.45
R3HDM1-202ENST00000409478 SPCS2Q15005 226 aa5.96□□□□□ -1.45
R3HDM1-202ENST00000409478 ERFEQ4G0M1 354 aa5.96□□□□□ -1.45
R3HDM1-202ENST00000409478 BRDTQ58F21 947 aaPredicted RBP5.96□□□□□ -1.45
R3HDM1-202ENST00000409478 MTX3Q5HYI7 312 aa5.96□□□□□ -1.45
R3HDM1-202ENST00000409478 ABRAXAS1Q6UWZ7 409 aa5.96□□□□□ -1.45
R3HDM1-202ENST00000409478 NEK10Q6ZWH5 1172 aa5.96□□□□□ -1.45
R3HDM1-202ENST00000409478 ANKRD13BQ86YJ7 626 aa5.96□□□□□ -1.45
R3HDM1-202ENST00000409478 CAMK1DQ8IU85 385 aa5.96□□□□□ -1.45
R3HDM1-202ENST00000409478 ZC3H7AQ8IWR0 971 aaKnown RBP5.96□□□□□ -1.45
R3HDM1-202ENST00000409478 SNX31Q8N9S9 440 aa5.96□□□□□ -1.45
R3HDM1-202ENST00000409478 ZC3H15Q8WU90 426 aaKnown RBP5.96□□□□□ -1.45
R3HDM1-202ENST00000409478 DCAF4Q8WV16 495 aa5.96□□□□□ -1.45
R3HDM1-202ENST00000409478 RCN3Q96D15 328 aa5.96□□□□□ -1.45
R3HDM1-202ENST00000409478 CEP44Q9C0F1 390 aa5.96□□□□□ -1.45
R3HDM1-202ENST00000409478 CYP26B1Q9NR63 512 aa5.96□□□□□ -1.45
R3HDM1-202ENST00000409478 DUS2Q9NX74 493 aaKnown RBP5.96□□□□□ -1.45
R3HDM1-202ENST00000409478 SAE1Q9UBE0 346 aaPredicted RBP5.96□□□□□ -1.45
R3HDM1-202ENST00000409478 NXF1Q9UBU9 619 aaKnown RBP5.96□□□□□ -1.45
R3HDM1-202ENST00000409478 PSME2Q9UL46 239 aa5.96□□□□□ -1.45
R3HDM1-202ENST00000409478 SATB2Q9UPW6 733 aa5.96□□□□□ -1.45
R3HDM1-202ENST00000409478 CDK5RAP2Q96SN8 1893 aa5.96□□□□□ -1.45
R3HDM1-202ENST00000409478 STRCQ7RTU9 1775 aa5.96□□□□□ -1.46
R3HDM1-202ENST00000409478 IGLV3-22A0A075B6J6 115 aa5.96□□□□□ -1.46
R3HDM1-202ENST00000409478 HMX2A2RU54 273 aa5.96□□□□□ -1.46
R3HDM1-202ENST00000409478 M0QX08 132 aa5.96□□□□□ -1.46
R3HDM1-202ENST00000409478 MMP8P22894 467 aa5.96□□□□□ -1.46
R3HDM1-202ENST00000409478 ZNF252P-AS1Q0IIN9 211 aa5.96□□□□□ -1.46
R3HDM1-202ENST00000409478 TAZQ16635 292 aa5.96□□□□□ -1.46
R3HDM1-202ENST00000409478 Q3C1V9 767 aa5.96□□□□□ -1.46
R3HDM1-202ENST00000409478 SLC9B1Q4ZJI4 515 aa5.96□□□□□ -1.46
R3HDM1-202ENST00000409478 RSBN1LQ6PCB5 846 aaPredicted RBP5.96□□□□□ -1.46
R3HDM1-202ENST00000409478 KCTD8Q6ZWB6 473 aa5.96□□□□□ -1.46
R3HDM1-202ENST00000409478 CYS1Q717R9 158 aa5.96□□□□□ -1.46
R3HDM1-202ENST00000409478 HERC6Q8IVU3 1022 aa5.96□□□□□ -1.46
R3HDM1-202ENST00000409478 CPNE9Q8IYJ1 553 aa5.96□□□□□ -1.46
R3HDM1-202ENST00000409478 ZSWIM2Q8NEG5 633 aa5.96□□□□□ -1.46
R3HDM1-202ENST00000409478 CLIP3Q96DZ5 547 aa5.96□□□□□ -1.46
R3HDM1-202ENST00000409478 TCF12Q99081 682 aa5.96□□□□□ -1.46
R3HDM1-202ENST00000409478 SLC29A1Q99808 456 aa5.96□□□□□ -1.46
R3HDM1-202ENST00000409478 CIB1Q99828 191 aa5.96□□□□□ -1.46
R3HDM1-202ENST00000409478 LXNQ9BS40 222 aa5.96□□□□□ -1.46
R3HDM1-202ENST00000409478 RAD21L1Q9H4I0 556 aa5.96□□□□□ -1.46
R3HDM1-202ENST00000409478 NANOGQ9H9S0 305 aa5.96□□□□□ -1.46
R3HDM1-202ENST00000409478 SIAEQ9HAT2 523 aa5.96□□□□□ -1.46
R3HDM1-202ENST00000409478 SMYD2Q9NRG4 433 aa5.96□□□□□ -1.46
R3HDM1-202ENST00000409478 SACM1LQ9NTJ5 587 aa5.96□□□□□ -1.46
R3HDM1-202ENST00000409478 MRGBPQ9NV56 204 aa5.96□□□□□ -1.46
R3HDM1-202ENST00000409478 TRAF6Q9Y4K3 522 aa5.96□□□□□ -1.46
R3HDM1-202ENST00000409478 LOXHD1Q8IVV2 1947 aa5.96□□□□□ -1.46
R3HDM1-202ENST00000409478 PLOD2O00469 737 aa5.96□□□□□ -1.46
R3HDM1-202ENST00000409478 PAPSS1O43252 624 aaPredicted RBP5.96□□□□□ -1.46
R3HDM1-202ENST00000409478 AVILO75366 819 aa5.96□□□□□ -1.46
R3HDM1-202ENST00000409478 CSPG5O95196 566 aa5.96□□□□□ -1.46
R3HDM1-202ENST00000409478 CPNE6O95741 557 aa5.96□□□□□ -1.46
R3HDM1-202ENST00000409478 KDELR1P24390 212 aa5.96□□□□□ -1.46
R3HDM1-202ENST00000409478 EEF1DP29692 281 aaKnown RBP5.96□□□□□ -1.46
R3HDM1-202ENST00000409478 RCVRNP35243 200 aa5.96□□□□□ -1.46
R3HDM1-202ENST00000409478 MRPS9P82933 396 aaKnown RBP5.96□□□□□ -1.46
R3HDM1-202ENST00000409478 GABPAQ06546 454 aa5.96□□□□□ -1.46
R3HDM1-202ENST00000409478 NME3Q13232 169 aa5.96□□□□□ -1.46
R3HDM1-202ENST00000409478 FAM209AQ5JX71 171 aa5.96□□□□□ -1.46
R3HDM1-202ENST00000409478 INTS11Q5TA45 600 aaKnown RBP5.96□□□□□ -1.46
R3HDM1-202ENST00000409478 DARS2Q6PI48 645 aaKnown RBP5.96□□□□□ -1.46
R3HDM1-202ENST00000409478 UNC5AQ6ZN44 842 aa5.96□□□□□ -1.46
R3HDM1-202ENST00000409478 RFX6Q8HWS3 928 aa5.96□□□□□ -1.46
R3HDM1-202ENST00000409478 ELMOD1Q8N336 334 aa5.96□□□□□ -1.46
R3HDM1-202ENST00000409478 TTC39CQ8N584 583 aa5.96□□□□□ -1.46
R3HDM1-202ENST00000409478 OR13F1Q8NGS4 319 aa5.96□□□□□ -1.46
R3HDM1-202ENST00000409478 SLC7A3Q8WY07 619 aa5.96□□□□□ -1.46
R3HDM1-202ENST00000409478 PPWD1Q96BP3 646 aaKnown RBP5.96□□□□□ -1.46
R3HDM1-202ENST00000409478 ACSF2Q96CM8 615 aaPredicted RBP5.96□□□□□ -1.46
R3HDM1-202ENST00000409478 ADI1Q9BV57 179 aa5.96□□□□□ -1.46
R3HDM1-202ENST00000409478 SLC9A2Q9UBY0 812 aa5.96□□□□□ -1.46
R3HDM1-202ENST00000409478 VPS51Q9UID3 782 aa5.96□□□□□ -1.46
R3HDM1-202ENST00000409478 GOLGA8CPA6NN73 597 aa5.96□□□□□ -1.46
R3HDM1-202ENST00000409478 KPNA7A9QM74 516 aa5.96□□□□□ -1.46
R3HDM1-202ENST00000409478 C9IYK1 514 aa5.96□□□□□ -1.46
R3HDM1-202ENST00000409478 LSM8O95777 96 aaKnown RBP5.96□□□□□ -1.46
R3HDM1-202ENST00000409478 FGFR3P22607 806 aa5.96□□□□□ -1.46
R3HDM1-202ENST00000409478 POLR2BP30876 1174 aaKnown RBP5.96□□□□□ -1.46
R3HDM1-202ENST00000409478 MSX2P35548 267 aaPredicted RBP5.96□□□□□ -1.46
R3HDM1-202ENST00000409478 HPCAL1P37235 193 aa5.96□□□□□ -1.46
R3HDM1-202ENST00000409478 ADAM17P78536 824 aa5.96□□□□□ -1.46
R3HDM1-202ENST00000409478 CYP24A1Q07973 514 aa5.96□□□□□ -1.46
R3HDM1-202ENST00000409478 MERTKQ12866 999 aa5.96□□□□□ -1.46
R3HDM1-202ENST00000409478 NAB1Q13506 487 aa5.96□□□□□ -1.46
R3HDM1-202ENST00000409478 PPM1LQ5SGD2 360 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms