RNA–Protein interactions for RNA: ENST00000409031.5

SMPD4-202, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD4, Length 4,896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-202ENST00000409031 SAE1Q9UBE0 346 aaPredicted RBP18.03■□□□□ 0.48
SMPD4-202ENST00000409031 NFS1Q9Y697 457 aa18.03■□□□□ 0.48
SMPD4-202ENST00000409031 DHRS12A0PJE2 317 aa18.02■□□□□ 0.48
SMPD4-202ENST00000409031 ENTPD3O75355 529 aa18.02■□□□□ 0.48
SMPD4-202ENST00000409031 PDGFRBP09619 1106 aa18.02■□□□□ 0.48
SMPD4-202ENST00000409031 NELFEP18615 380 aaKnown RBP18.02■□□□□ 0.48
SMPD4-202ENST00000409031 DNAJB2P25686 324 aa18.02■□□□□ 0.48
SMPD4-202ENST00000409031 TUBA4AP68366 448 aa18.02■□□□□ 0.48
SMPD4-202ENST00000409031 SPIRE2Q8WWL2 714 aa18.02■□□□□ 0.48
SMPD4-202ENST00000409031 PABPC5Q96DU9 382 aaKnown RBP18.02■□□□□ 0.48
SMPD4-202ENST00000409031 CYP3A43Q9HB55 503 aa18.02■□□□□ 0.48
SMPD4-202ENST00000409031 FANCEQ9HB96 536 aa18.02■□□□□ 0.48
SMPD4-202ENST00000409031 PRMT7Q9NVM4 692 aaPredicted RBP18.02■□□□□ 0.48
SMPD4-202ENST00000409031 PLK2Q9NYY3 685 aa18.02■□□□□ 0.48
SMPD4-202ENST00000409031 C3orf18Q9UK00 162 aa18.02■□□□□ 0.48
SMPD4-202ENST00000409031 VPS4BO75351 444 aa18.02■□□□□ 0.48
SMPD4-202ENST00000409031 MSH3P20585 1137 aa18.02■□□□□ 0.48
SMPD4-202ENST00000409031 IL12AP29459 219 aa18.02■□□□□ 0.48
SMPD4-202ENST00000409031 SLC18A1P54219 525 aa18.02■□□□□ 0.48
SMPD4-202ENST00000409031 HADHBP55084 474 aaKnown RBP18.02■□□□□ 0.48
SMPD4-202ENST00000409031 C1DQ13901 141 aaKnown RBP18.02■□□□□ 0.48
SMPD4-202ENST00000409031 TRIQKQ629K1 86 aa18.02■□□□□ 0.48
SMPD4-202ENST00000409031 CCDC149Q6ZUS6 474 aa18.02■□□□□ 0.48
SMPD4-202ENST00000409031 MYO1HQ8N1T3 1032 aa18.02■□□□□ 0.48
SMPD4-202ENST00000409031 UBASH3BQ8TF42 649 aa18.02■□□□□ 0.48
SMPD4-202ENST00000409031 PHF21BQ96EK2 531 aa18.02■□□□□ 0.48
SMPD4-202ENST00000409031 APOL2Q9BQE5 337 aa18.02■□□□□ 0.48
SMPD4-202ENST00000409031 PIF1Q9H611 641 aa18.02■□□□□ 0.48
SMPD4-202ENST00000409031 CXorf21Q9HAI6 301 aa18.02■□□□□ 0.48
SMPD4-202ENST00000409031 FOXO6A8MYZ6 492 aa18.02■□□□□ 0.47
SMPD4-202ENST00000409031 ITGB3P05106 788 aa18.02■□□□□ 0.47
SMPD4-202ENST00000409031 BNC1Q01954 994 aa18.02■□□□□ 0.47
SMPD4-202ENST00000409031 RAD51Q06609 339 aa18.02■□□□□ 0.47
SMPD4-202ENST00000409031 NCF4Q15080 339 aa18.02■□□□□ 0.47
SMPD4-202ENST00000409031 ATP13A4Q4VNC1 1196 aa18.02■□□□□ 0.47
SMPD4-202ENST00000409031 SYTL2Q9HCH5 934 aa18.02■□□□□ 0.47
SMPD4-202ENST00000409031 KCNMB3Q9NPA1 279 aa18.02■□□□□ 0.47
SMPD4-202ENST00000409031 LIMD1Q9UGP4 676 aa18.02■□□□□ 0.47
SMPD4-202ENST00000409031 CDH9Q9ULB4 789 aa18.02■□□□□ 0.47
SMPD4-202ENST00000409031 HACD1B0YJ81 288 aa18.01■□□□□ 0.47
SMPD4-202ENST00000409031 CDH17Q12864 832 aa18.01■□□□□ 0.47
SMPD4-202ENST00000409031 AHI1Q8N157 1196 aa18.01■□□□□ 0.47
SMPD4-202ENST00000409031 DQX1Q8TE96 717 aaKnown RBP18.01■□□□□ 0.47
SMPD4-202ENST00000409031 PLEKHA8Q96JA3 519 aa18.01■□□□□ 0.47
SMPD4-202ENST00000409031 EBNA1BP2Q99848 306 aaKnown RBP18.01■□□□□ 0.47
SMPD4-202ENST00000409031 AFF4Q9UHB7 1163 aaKnown RBP18.01■□□□□ 0.47
SMPD4-202ENST00000409031 TCRBV7S2A1N4TA0A589 114 aa18.01■□□□□ 0.47
SMPD4-202ENST00000409031 PGK2P07205 417 aa18.01■□□□□ 0.47
SMPD4-202ENST00000409031 CYP2C9P11712 490 aa18.01■□□□□ 0.47
SMPD4-202ENST00000409031 ILF2Q12905 390 aaKnown RBP18.01■□□□□ 0.47
SMPD4-202ENST00000409031 DPP9Q86TI2 863 aa18.01■□□□□ 0.47
SMPD4-202ENST00000409031 ADHFE1Q8IWW8 467 aa18.01■□□□□ 0.47
SMPD4-202ENST00000409031 FIG4Q92562 907 aa18.01■□□□□ 0.47
SMPD4-202ENST00000409031 ADAM30Q9UKF2 790 aa18.01■□□□□ 0.47
SMPD4-202ENST00000409031 FADS3Q9Y5Q0 445 aa18.01■□□□□ 0.47
SMPD4-202ENST00000409031 MST1RQ04912 1400 aa18.01■□□□□ 0.47
SMPD4-202ENST00000409031 ASLP04424 464 aa18.01■□□□□ 0.47
SMPD4-202ENST00000409031 LRRC74AQ0VAA2 488 aa18.01■□□□□ 0.47
SMPD4-202ENST00000409031 CYP1B1Q16678 543 aa18.01■□□□□ 0.47
SMPD4-202ENST00000409031 SCARA3Q6AZY7 606 aa18.01■□□□□ 0.47
SMPD4-202ENST00000409031 SP8Q8IXZ3 490 aa18.01■□□□□ 0.47
SMPD4-202ENST00000409031 GPRASP2Q96D09 838 aa18.01■□□□□ 0.47
SMPD4-202ENST00000409031 OLFM1Q99784 485 aa18.01■□□□□ 0.47
SMPD4-202ENST00000409031 LATS2Q9NRM7 1088 aa18.01■□□□□ 0.47
SMPD4-202ENST00000409031 CLEC11AQ9Y240 323 aa18.01■□□□□ 0.47
SMPD4-202ENST00000409031 PCDHA11Q9Y5I1 949 aa18.01■□□□□ 0.47
SMPD4-202ENST00000409031 SLC30A1Q9Y6M5 507 aa18.01■□□□□ 0.47
SMPD4-202ENST00000409031 DCAF8L1A6NGE4 600 aa18.01■□□□□ 0.47
SMPD4-202ENST00000409031 C2orf71A6NGG8 1288 aa18.01■□□□□ 0.47
SMPD4-202ENST00000409031 FAM86B1E9PN63 330 aa18.01■□□□□ 0.47
SMPD4-202ENST00000409031 M0QYT0 321 aa18.01■□□□□ 0.47
SMPD4-202ENST00000409031 SIN3BO75182 1162 aa18.01■□□□□ 0.47
SMPD4-202ENST00000409031 NADKO95544 446 aaPredicted RBP18.01■□□□□ 0.47
SMPD4-202ENST00000409031 ZNF682O95780 498 aa18.01■□□□□ 0.47
SMPD4-202ENST00000409031 FAM86B2P0C5J1 330 aa18.01■□□□□ 0.47
SMPD4-202ENST00000409031 PRDX6P30041 224 aa18.01■□□□□ 0.47
SMPD4-202ENST00000409031 CRHR1P34998 444 aa18.01■□□□□ 0.47
SMPD4-202ENST00000409031 FCHO2Q0JRZ9 810 aa18.01■□□□□ 0.47
SMPD4-202ENST00000409031 ZNF276Q8N554 614 aa18.01■□□□□ 0.47
SMPD4-202ENST00000409031 ZHX1-C8orf76Q96EF9 292 aa18.01■□□□□ 0.47
SMPD4-202ENST00000409031 TMEM176AQ96HP8 235 aa18.01■□□□□ 0.47
SMPD4-202ENST00000409031 CDH19Q9H159 772 aa18.01■□□□□ 0.47
SMPD4-202ENST00000409031 CCDC154A6NI56 674 aa18■□□□□ 0.47
SMPD4-202ENST00000409031 NEK3P51956 506 aa18■□□□□ 0.47
SMPD4-202ENST00000409031 PHF13Q86YI8 300 aaPredicted RBP18■□□□□ 0.47
SMPD4-202ENST00000409031 AVILO75366 819 aa18■□□□□ 0.47
SMPD4-202ENST00000409031 LYPLA1O75608 230 aaPredicted RBP18■□□□□ 0.47
SMPD4-202ENST00000409031 SLC5A3P53794 718 aa18■□□□□ 0.47
SMPD4-202ENST00000409031 SPP2Q13103 211 aa18■□□□□ 0.47
SMPD4-202ENST00000409031 SUPT20HL1Q3ZLR7 823 aa18■□□□□ 0.47
SMPD4-202ENST00000409031 KLHL12Q53G59 568 aa18■□□□□ 0.47
SMPD4-202ENST00000409031 HYIQ5T013 277 aa18■□□□□ 0.47
SMPD4-202ENST00000409031 KCNT2Q6UVM3 1135 aa18■□□□□ 0.47
SMPD4-202ENST00000409031 PIWIL4Q7Z3Z4 852 aaKnown RBP18■□□□□ 0.47
SMPD4-202ENST00000409031 PROX1Q92786 737 aa18■□□□□ 0.47
SMPD4-202ENST00000409031 PNPOQ9NVS9 261 aa18■□□□□ 0.47
SMPD4-202ENST00000409031 SLC7A8Q9UHI5 535 aa18■□□□□ 0.47
SMPD4-202ENST00000409031 EFCAB10A6NFE3 127 aa18■□□□□ 0.47
SMPD4-202ENST00000409031 SNTNA6NMZ2 147 aa18■□□□□ 0.47
SMPD4-202ENST00000409031 CD3EAPO15446 510 aaKnown RBP18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms