RNA–Protein interactions for RNA: ENST00000409020.5

NIF3L1-202, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-202ENST00000409020 AASDHQ4L235 1098 aaPredicted RBP10.03□□□□□ -0.8
NIF3L1-202ENST00000409020 SYPL2Q5VXT5 272 aa10.03□□□□□ -0.8
NIF3L1-202ENST00000409020 DPY19L2P1Q6NXN4 242 aa10.03□□□□□ -0.8
NIF3L1-202ENST00000409020 TLDC1Q6P9B6 456 aa10.03□□□□□ -0.8
NIF3L1-202ENST00000409020 RFWD3Q6PCD5 774 aa10.03□□□□□ -0.8
NIF3L1-202ENST00000409020 PASD1Q8IV76 773 aa10.03□□□□□ -0.8
NIF3L1-202ENST00000409020 PGBD3Q8N328 593 aa10.03□□□□□ -0.8
NIF3L1-202ENST00000409020 WFDC5Q8TCV5 224 aa10.03□□□□□ -0.8
NIF3L1-202ENST00000409020 DDI1Q8WTU0 396 aa10.03□□□□□ -0.8
NIF3L1-202ENST00000409020 C16orf45Q96MC5 204 aaPredicted RBP10.03□□□□□ -0.8
NIF3L1-202ENST00000409020 GABRG3Q99928 467 aa10.03□□□□□ -0.8
NIF3L1-202ENST00000409020 DCLK3Q9C098 648 aa10.03□□□□□ -0.8
NIF3L1-202ENST00000409020 POLMQ9NP87 494 aaPredicted RBP10.03□□□□□ -0.8
NIF3L1-202ENST00000409020 ABCC13Q9NSE7 274 aa10.03□□□□□ -0.8
NIF3L1-202ENST00000409020 TMEM74BQ9NUR3 256 aa10.03□□□□□ -0.8
NIF3L1-202ENST00000409020 ITGB1BP2Q9UKP3 347 aa10.03□□□□□ -0.8
NIF3L1-202ENST00000409020 NAALADL1Q9UQQ1 740 aa10.03□□□□□ -0.8
NIF3L1-202ENST00000409020 ZNF510Q9Y2H8 683 aa10.03□□□□□ -0.8
NIF3L1-202ENST00000409020 GON4LQ3T8J9 2241 aa10.03□□□□□ -0.8
NIF3L1-202ENST00000409020 E5RJQ4 531 aa10.02□□□□□ -0.8
NIF3L1-202ENST00000409020 PAPSS1O43252 624 aaPredicted RBP10.02□□□□□ -0.8
NIF3L1-202ENST00000409020 THAP12O43422 761 aa10.02□□□□□ -0.8
NIF3L1-202ENST00000409020 ALDH1A2O94788 518 aa10.02□□□□□ -0.8
NIF3L1-202ENST00000409020 LTFP02788 710 aa10.02□□□□□ -0.8
NIF3L1-202ENST00000409020 HLA-FP30511 346 aa10.02□□□□□ -0.8
NIF3L1-202ENST00000409020 GNA15P30679 374 aa10.02□□□□□ -0.8
NIF3L1-202ENST00000409020 CHKAP35790 457 aa10.02□□□□□ -0.8
NIF3L1-202ENST00000409020 MTIF2P46199 727 aaKnown RBP10.02□□□□□ -0.8
NIF3L1-202ENST00000409020 RPL34P49207 117 aaKnown RBP10.02□□□□□ -0.8
NIF3L1-202ENST00000409020 DHPSP49366 369 aaPredicted RBP10.02□□□□□ -0.8
NIF3L1-202ENST00000409020 ROR2Q01974 943 aaKnown RBP10.02□□□□□ -0.8
NIF3L1-202ENST00000409020 EXOC3L4Q17RC7 722 aa10.02□□□□□ -0.8
NIF3L1-202ENST00000409020 HSF5Q4G112 596 aaPredicted RBP10.02□□□□□ -0.8
NIF3L1-202ENST00000409020 LRRC23Q53EV4 343 aaPredicted RBP10.02□□□□□ -0.8
NIF3L1-202ENST00000409020 FAM133BQ5BKY9 247 aaKnown RBP10.02□□□□□ -0.8
NIF3L1-202ENST00000409020 MIIPQ5JXC2 388 aa10.02□□□□□ -0.8
NIF3L1-202ENST00000409020 NADSYN1Q6IA69 706 aa10.02□□□□□ -0.8
NIF3L1-202ENST00000409020 CACUL1Q86Y37 369 aa10.02□□□□□ -0.8
NIF3L1-202ENST00000409020 SCML4Q8N228 414 aa10.02□□□□□ -0.8
NIF3L1-202ENST00000409020 WDTC1Q8N5D0 677 aa10.02□□□□□ -0.8
NIF3L1-202ENST00000409020 MLKLQ8NB16 471 aa10.02□□□□□ -0.8
NIF3L1-202ENST00000409020 NETO1Q8TDF5 533 aa10.02□□□□□ -0.8
NIF3L1-202ENST00000409020 DQX1Q8TE96 717 aaKnown RBP10.02□□□□□ -0.8
NIF3L1-202ENST00000409020 ZNF606Q8WXB4 792 aa10.02□□□□□ -0.8
NIF3L1-202ENST00000409020 HSFY1Q96LI6 401 aa10.02□□□□□ -0.8
NIF3L1-202ENST00000409020 CCDC114Q96M63 670 aa10.02□□□□□ -0.8
NIF3L1-202ENST00000409020 ALS2CR12Q96Q35 445 aa10.02□□□□□ -0.8
NIF3L1-202ENST00000409020 FSCN3Q9NQT6 498 aa10.02□□□□□ -0.8
NIF3L1-202ENST00000409020 APEX2Q9UBZ4 518 aa10.02□□□□□ -0.8
NIF3L1-202ENST00000409020 XPO7Q9UIA9 1087 aaKnown RBP10.02□□□□□ -0.8
NIF3L1-202ENST00000409020 SLC27A6Q9Y2P4 619 aa10.02□□□□□ -0.8
NIF3L1-202ENST00000409020 HBS1LQ9Y450 684 aaKnown RBP10.02□□□□□ -0.8
NIF3L1-202ENST00000409020 TPRP12270 2363 aaKnown RBP10.02□□□□□ -0.8
NIF3L1-202ENST00000409020 SMG1Q96Q15 3661 aaKnown RBP10.02□□□□□ -0.81
NIF3L1-202ENST00000409020 RALGAPA1Q6GYQ0 2036 aa10.02□□□□□ -0.81
NIF3L1-202ENST00000409020 LNP1A1A4G5 178 aa10.02□□□□□ -0.81
NIF3L1-202ENST00000409020 SLC30A4O14863 429 aa10.02□□□□□ -0.81
NIF3L1-202ENST00000409020 RHOBTB1O94844 696 aa10.02□□□□□ -0.81
NIF3L1-202ENST00000409020 FGFR1OPO95684 399 aaKnown RBP10.02□□□□□ -0.81
NIF3L1-202ENST00000409020 CAVIN2O95810 425 aa10.02□□□□□ -0.81
NIF3L1-202ENST00000409020 IGLV3-27P01718 113 aa10.02□□□□□ -0.81
NIF3L1-202ENST00000409020 NCAM1P13591 858 aa10.02□□□□□ -0.81
NIF3L1-202ENST00000409020 EZRP15311 586 aaKnown RBP10.02□□□□□ -0.81
NIF3L1-202ENST00000409020 PRKCHP24723 683 aa10.02□□□□□ -0.81
NIF3L1-202ENST00000409020 HARS2P49590 506 aaKnown RBP10.02□□□□□ -0.81
NIF3L1-202ENST00000409020 PDCLQ13371 301 aa10.02□□□□□ -0.81
NIF3L1-202ENST00000409020 SLMAPQ14BN4 828 aa10.02□□□□□ -0.81
NIF3L1-202ENST00000409020 KRT72Q14CN4 511 aa10.02□□□□□ -0.81
NIF3L1-202ENST00000409020 STILQ15468 1287 aa10.02□□□□□ -0.81
NIF3L1-202ENST00000409020 FUT11Q495W5 492 aa10.02□□□□□ -0.81
NIF3L1-202ENST00000409020 ZFYVE27Q5T4F4 411 aa10.02□□□□□ -0.81
NIF3L1-202ENST00000409020 MSANTD2Q6P1R3 559 aa10.02□□□□□ -0.81
NIF3L1-202ENST00000409020 SLC30A9Q6PML9 568 aa10.02□□□□□ -0.81
NIF3L1-202ENST00000409020 NYAP1Q6ZVC0 841 aa10.02□□□□□ -0.81
NIF3L1-202ENST00000409020 TRMT11Q7Z4G4 463 aaKnown RBP10.02□□□□□ -0.81
NIF3L1-202ENST00000409020 TAC4Q86UU9 113 aa10.02□□□□□ -0.81
NIF3L1-202ENST00000409020 CPXM2Q8N436 756 aa10.02□□□□□ -0.81
NIF3L1-202ENST00000409020 ZNF366Q8N895 744 aa10.02□□□□□ -0.81
NIF3L1-202ENST00000409020 C12orf50Q8NA57 414 aaPredicted RBP10.02□□□□□ -0.81
NIF3L1-202ENST00000409020 FAM76AQ8TAV0 307 aa10.02□□□□□ -0.81
NIF3L1-202ENST00000409020 CYB5D2Q8WUJ1 264 aa10.02□□□□□ -0.81
NIF3L1-202ENST00000409020 IRGQQ8WZA9 623 aa10.02□□□□□ -0.81
NIF3L1-202ENST00000409020 FCRL2Q96LA5 508 aaPredicted RBP10.02□□□□□ -0.81
NIF3L1-202ENST00000409020 PRICKLE1Q96MT3 831 aaPredicted RBP10.02□□□□□ -0.81
NIF3L1-202ENST00000409020 SLC4A5Q9BY07 1137 aa10.02□□□□□ -0.81
NIF3L1-202ENST00000409020 MKRN2Q9H000 416 aaKnown RBP10.02□□□□□ -0.81
NIF3L1-202ENST00000409020 NUP62CLQ9H1M0 184 aa10.02□□□□□ -0.81
NIF3L1-202ENST00000409020 PLCB1Q9NQ66 1216 aa10.02□□□□□ -0.81
NIF3L1-202ENST00000409020 VPS45Q9NRW7 570 aa10.02□□□□□ -0.81
NIF3L1-202ENST00000409020 SAMSN1Q9NSI8 373 aaKnown RBP10.02□□□□□ -0.81
NIF3L1-202ENST00000409020 OLA1Q9NTK5 396 aaKnown RBP10.02□□□□□ -0.81
NIF3L1-202ENST00000409020 STOML2Q9UJZ1 356 aa10.02□□□□□ -0.81
NIF3L1-202ENST00000409020 CYP8B1Q9UNU6 501 aa10.02□□□□□ -0.81
NIF3L1-202ENST00000409020 PCDHGA5Q9Y5G8 931 aa10.02□□□□□ -0.81
NIF3L1-202ENST00000409020 STON1Q9Y6Q2 735 aa10.02□□□□□ -0.81
NIF3L1-202ENST00000409020 IGHV1OR15-9A0A0B4J2B8 117 aa10.01□□□□□ -0.81
NIF3L1-202ENST00000409020 LIN7AO14910 233 aaPredicted RBP10.01□□□□□ -0.81
NIF3L1-202ENST00000409020 HLA-EP13747 358 aa10.01□□□□□ -0.81
NIF3L1-202ENST00000409020 FERP16591 822 aa10.01□□□□□ -0.81
NIF3L1-202ENST00000409020 ITPKAP23677 461 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms