RNA–Protein interactions for RNA: ENST00000405578.8

RPAIN-204, Transcript of RPA interacting protein, humanhuman

TSL 2 BASIC

Gene RPAIN, Length 1,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-204ENST00000405578 LOC400499M0QZD8 3231 aa10.92□□□□□ -0.66
RPAIN-204ENST00000405578 DENND4CQ5VZ89 1909 aa10.92□□□□□ -0.66
RPAIN-204ENST00000405578 ADAMTS9Q9P2N4 1935 aa10.92□□□□□ -0.66
RPAIN-204ENST00000405578 HELZ2Q9BYK8 2649 aaKnown RBP10.91□□□□□ -0.66
RPAIN-204ENST00000405578 TNRC6BQ9UPQ9 1833 aaKnown RBP10.91□□□□□ -0.66
RPAIN-204ENST00000405578 A0A0A6YYK5 440 aaPredicted RBP10.91□□□□□ -0.66
RPAIN-204ENST00000405578 CCDC163A0A0D9SF12 145 aa10.91□□□□□ -0.66
RPAIN-204ENST00000405578 LNP1A1A4G5 178 aa10.91□□□□□ -0.66
RPAIN-204ENST00000405578 KCNU1A8MYU2 1149 aa10.91□□□□□ -0.66
RPAIN-204ENST00000405578 CCP110O43303 1012 aa10.91□□□□□ -0.66
RPAIN-204ENST00000405578 PRPSAP2O60256 369 aa10.91□□□□□ -0.66
RPAIN-204ENST00000405578 ACSL4O60488 711 aa10.91□□□□□ -0.66
RPAIN-204ENST00000405578 CCDC175P0C221 793 aa10.91□□□□□ -0.66
RPAIN-204ENST00000405578 CEACAM1P13688 526 aa10.91□□□□□ -0.66
RPAIN-204ENST00000405578 ARHGAP25P42331 645 aa10.91□□□□□ -0.66
RPAIN-204ENST00000405578 AIF1P55008 147 aa10.91□□□□□ -0.66
RPAIN-204ENST00000405578 NAP1L1P55209 391 aaKnown RBP10.91□□□□□ -0.66
RPAIN-204ENST00000405578 PITX1P78337 314 aaPredicted RBP10.91□□□□□ -0.66
RPAIN-204ENST00000405578 RUNX3Q13761 415 aa10.91□□□□□ -0.66
RPAIN-204ENST00000405578 TCEAL1Q15170 157 aa10.91□□□□□ -0.66
RPAIN-204ENST00000405578 C15orf59Q2T9L4 293 aaPredicted RBP10.91□□□□□ -0.66
RPAIN-204ENST00000405578 EML3Q32P44 896 aa10.91□□□□□ -0.66
RPAIN-204ENST00000405578 ITPRIPL2Q3MIP1 535 aa10.91□□□□□ -0.66
RPAIN-204ENST00000405578 PREPLQ4J6C6 727 aaPredicted RBP10.91□□□□□ -0.66
RPAIN-204ENST00000405578 SCYL2Q6P3W7 929 aa10.91□□□□□ -0.66
RPAIN-204ENST00000405578 Q6ZNB5 142 aa10.91□□□□□ -0.66
RPAIN-204ENST00000405578 FAM131BQ86XD5 332 aa10.91□□□□□ -0.66
RPAIN-204ENST00000405578 ADGRG2Q8IZP9 1017 aa10.91□□□□□ -0.66
RPAIN-204ENST00000405578 SYNPOQ8N3V7 929 aa10.91□□□□□ -0.66
RPAIN-204ENST00000405578 DEFB124Q8NES8 71 aa10.91□□□□□ -0.66
RPAIN-204ENST00000405578 SLC35G2Q8TBE7 412 aa10.91□□□□□ -0.66
RPAIN-204ENST00000405578 CENPIQ92674 756 aaPredicted RBP10.91□□□□□ -0.66
RPAIN-204ENST00000405578 FCRL2Q96LA5 508 aaPredicted RBP10.91□□□□□ -0.66
RPAIN-204ENST00000405578 TSGA10Q9BZW7 698 aa10.91□□□□□ -0.66
RPAIN-204ENST00000405578 TKTL2Q9H0I9 626 aa10.91□□□□□ -0.66
RPAIN-204ENST00000405578 EBF3Q9H4W6 596 aa10.91□□□□□ -0.66
RPAIN-204ENST00000405578 PIGVQ9NUD9 493 aa10.91□□□□□ -0.66
RPAIN-204ENST00000405578 GTSE1Q9NYZ3 720 aa10.91□□□□□ -0.66
RPAIN-204ENST00000405578 NEUROG3Q9Y4Z2 214 aa10.91□□□□□ -0.66
RPAIN-204ENST00000405578 F5H5T6 163 aa10.9□□□□□ -0.66
RPAIN-204ENST00000405578 SCAMP3O14828 347 aaKnown RBP10.9□□□□□ -0.66
RPAIN-204ENST00000405578 KRT86O43790 486 aa10.9□□□□□ -0.66
RPAIN-204ENST00000405578 GREM1O60565 184 aa10.9□□□□□ -0.66
RPAIN-204ENST00000405578 MTA2O94776 668 aa10.9□□□□□ -0.66
RPAIN-204ENST00000405578 KLKB1P03952 638 aa10.9□□□□□ -0.66
RPAIN-204ENST00000405578 CSRP1P21291 193 aaKnown RBP10.9□□□□□ -0.66
RPAIN-204ENST00000405578 PCK1P35558 622 aa10.9□□□□□ -0.66
RPAIN-204ENST00000405578 SSR1P43307 286 aaKnown RBP10.9□□□□□ -0.66
RPAIN-204ENST00000405578 GAD2Q05329 585 aa10.9□□□□□ -0.66
RPAIN-204ENST00000405578 EIF4EBP2Q13542 120 aaPredicted RBP10.9□□□□□ -0.66
RPAIN-204ENST00000405578 ELF2Q15723 593 aa10.9□□□□□ -0.66
RPAIN-204ENST00000405578 HADHQ16836 314 aaKnown RBP10.9□□□□□ -0.66
RPAIN-204ENST00000405578 ANO4Q32M45 955 aa10.9□□□□□ -0.66
RPAIN-204ENST00000405578 MPPE1Q53F39 396 aa10.9□□□□□ -0.66
RPAIN-204ENST00000405578 EFHC2Q5JST6 749 aa10.9□□□□□ -0.66
RPAIN-204ENST00000405578 TRIM68Q6AZZ1 485 aa10.9□□□□□ -0.66
RPAIN-204ENST00000405578 TRNP1Q6NT89 227 aa10.9□□□□□ -0.66
RPAIN-204ENST00000405578 C19orf48Q6RUI8 117 aa10.9□□□□□ -0.66
RPAIN-204ENST00000405578 LRRC31Q6UY01 552 aa10.9□□□□□ -0.66
RPAIN-204ENST00000405578 CHSY1Q86X52 802 aa10.9□□□□□ -0.66
RPAIN-204ENST00000405578 CPXM2Q8N436 756 aa10.9□□□□□ -0.66
RPAIN-204ENST00000405578 NIPA2Q8N8Q9 360 aa10.9□□□□□ -0.66
RPAIN-204ENST00000405578 ZNF557Q8N988 423 aaPredicted RBP10.9□□□□□ -0.66
RPAIN-204ENST00000405578 ACRBPQ8NEB7 543 aa10.9□□□□□ -0.66
RPAIN-204ENST00000405578 NTAN1Q96AB6 310 aa10.9□□□□□ -0.66
RPAIN-204ENST00000405578 TMA16Q96EY4 203 aaKnown RBP10.9□□□□□ -0.66
RPAIN-204ENST00000405578 HAPLN3Q96S86 360 aa10.9□□□□□ -0.66
RPAIN-204ENST00000405578 DESI2Q9BSY9 194 aa10.9□□□□□ -0.66
RPAIN-204ENST00000405578 DUSP15Q9H1R2 295 aaPredicted RBP10.9□□□□□ -0.66
RPAIN-204ENST00000405578 LINC00597Q9H2U6 94 aa10.9□□□□□ -0.66
RPAIN-204ENST00000405578 ECT2Q9H8V3 914 aa10.9□□□□□ -0.66
RPAIN-204ENST00000405578 TMEM9BQ9NQ34 198 aa10.9□□□□□ -0.66
RPAIN-204ENST00000405578 SPHK2Q9NRA0 654 aa10.9□□□□□ -0.66
RPAIN-204ENST00000405578 POLR3BQ9NW08 1133 aaPredicted RBP10.9□□□□□ -0.66
RPAIN-204ENST00000405578 ARHGEF38Q9NXL2 777 aa10.9□□□□□ -0.66
RPAIN-204ENST00000405578 STOML2Q9UJZ1 356 aa10.9□□□□□ -0.66
RPAIN-204ENST00000405578 KLK13Q9UKR3 277 aa10.9□□□□□ -0.66
RPAIN-204ENST00000405578 SLC8A2Q9UPR5 921 aa10.9□□□□□ -0.66
RPAIN-204ENST00000405578 BCLAF3A2AJT9 711 aaKnown RBP10.89□□□□□ -0.67
RPAIN-204ENST00000405578 BTNL10A8MVZ5 291 aa10.89□□□□□ -0.67
RPAIN-204ENST00000405578 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.89□□□□□ -0.67
RPAIN-204ENST00000405578 DCLK1O15075 740 aa10.89□□□□□ -0.67
RPAIN-204ENST00000405578 PAGE1O75459 146 aa10.89□□□□□ -0.67
RPAIN-204ENST00000405578 PROSCO94903 275 aa10.89□□□□□ -0.67
RPAIN-204ENST00000405578 ADH5P11766 374 aa10.89□□□□□ -0.67
RPAIN-204ENST00000405578 ARSAP15289 507 aa10.89□□□□□ -0.67
RPAIN-204ENST00000405578 TFE3P19532 575 aaPredicted RBP10.89□□□□□ -0.67
RPAIN-204ENST00000405578 MAN1A1P33908 653 aa10.89□□□□□ -0.67
RPAIN-204ENST00000405578 ADRA1BP35368 520 aa10.89□□□□□ -0.67
RPAIN-204ENST00000405578 SLC1A1P43005 524 aa10.89□□□□□ -0.67
RPAIN-204ENST00000405578 HDAC4P56524 1084 aa10.89□□□□□ -0.67
RPAIN-204ENST00000405578 CCZ1BP86790 482 aa10.89□□□□□ -0.67
RPAIN-204ENST00000405578 CCZ1P86791 482 aaPredicted RBP10.89□□□□□ -0.67
RPAIN-204ENST00000405578 TNK2Q07912 1038 aa10.89□□□□□ -0.67
RPAIN-204ENST00000405578 MESDQ14696 234 aa10.89□□□□□ -0.67
RPAIN-204ENST00000405578 DHCR24Q15392 516 aa10.89□□□□□ -0.67
RPAIN-204ENST00000405578 UAP1L1Q3KQV9 507 aa10.89□□□□□ -0.67
RPAIN-204ENST00000405578 BOLA3Q53S33 107 aa10.89□□□□□ -0.67
RPAIN-204ENST00000405578 RABGAP1LQ5R372 815 aa10.89□□□□□ -0.67
RPAIN-204ENST00000405578 LY6G5CQ5SRR4 150 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms