RNA–Protein interactions for RNA: ENST00000403303.5

CCDC178-204, Transcript of coiled-coil domain containing 178, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC178, Length 3,354 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC178-204ENST00000403303 SMC6Q96SB8 1091 aa3.99□□□□□ -1.77
CCDC178-204ENST00000403303 IWS1Q96ST2 819 aa3.99□□□□□ -1.77
CCDC178-204ENST00000403303 CITED2Q99967 270 aaPredicted RBP3.99□□□□□ -1.77
CCDC178-204ENST00000403303 TRIM6Q9C030 488 aaPredicted RBP3.99□□□□□ -1.77
CCDC178-204ENST00000403303 INTS2Q9H0H0 1204 aaKnown RBP3.99□□□□□ -1.77
CCDC178-204ENST00000403303 IKZF4Q9H2S9 585 aa3.99□□□□□ -1.77
CCDC178-204ENST00000403303 LMCD1Q9NZU5 365 aa3.99□□□□□ -1.77
CCDC178-204ENST00000403303 PLAGL2Q9UPG8 496 aa3.99□□□□□ -1.77
CCDC178-204ENST00000403303 A0A087WWL8 130 aa3.99□□□□□ -1.77
CCDC178-204ENST00000403303 A0A0A6YYC8 382 aaPredicted RBP3.99□□□□□ -1.77
CCDC178-204ENST00000403303 FADS2P1A8MWK0 482 aa3.99□□□□□ -1.77
CCDC178-204ENST00000403303 I3L1I5 382 aaPredicted RBP3.99□□□□□ -1.77
CCDC178-204ENST00000403303 HNRNPDLO14979 420 aaKnown RBP3.99□□□□□ -1.77
CCDC178-204ENST00000403303 RB1P06400 928 aa3.99□□□□□ -1.77
CCDC178-204ENST00000403303 RHOP08100 348 aa3.99□□□□□ -1.77
CCDC178-204ENST00000403303 LBPP18428 481 aa3.99□□□□□ -1.77
CCDC178-204ENST00000403303 HK1P19367 917 aa3.99□□□□□ -1.77
CCDC178-204ENST00000403303 APEX1P27695 318 aaKnown RBP3.99□□□□□ -1.77
CCDC178-204ENST00000403303 HSPA1LP34931 641 aa3.99□□□□□ -1.77
CCDC178-204ENST00000403303 NPY4RP50391 375 aa3.99□□□□□ -1.77
CCDC178-204ENST00000403303 CDH15P55291 814 aa3.99□□□□□ -1.77
CCDC178-204ENST00000403303 HERVK_113P62684 666 aa3.99□□□□□ -1.77
CCDC178-204ENST00000403303 PRR5P85299 388 aa3.99□□□□□ -1.77
CCDC178-204ENST00000403303 MZT1Q08AG7 82 aa3.99□□□□□ -1.77
CCDC178-204ENST00000403303 MRPL28Q13084 256 aaKnown RBP3.99□□□□□ -1.77
CCDC178-204ENST00000403303 CBX3Q13185 183 aa3.99□□□□□ -1.77
CCDC178-204ENST00000403303 IKZF1Q13422 519 aa3.99□□□□□ -1.77
CCDC178-204ENST00000403303 WSCD2Q2TBF2 565 aa3.99□□□□□ -1.77
CCDC178-204ENST00000403303 TBC1D10BQ4KMP7 808 aaPredicted RBP3.99□□□□□ -1.77
CCDC178-204ENST00000403303 LBHQ53QV2 105 aaPredicted RBP3.99□□□□□ -1.77
CCDC178-204ENST00000403303 DCAF17Q5H9S7 520 aaPredicted RBP3.99□□□□□ -1.77
CCDC178-204ENST00000403303 NHSL2Q5HYW2 709 aa3.99□□□□□ -1.77
CCDC178-204ENST00000403303 WDR73Q6P4I2 378 aa3.99□□□□□ -1.77
CCDC178-204ENST00000403303 TBC1D21Q8IYX1 336 aa3.99□□□□□ -1.77
CCDC178-204ENST00000403303 IRF7Q92985 503 aa3.99□□□□□ -1.77
CCDC178-204ENST00000403303 NTPCRQ9BSD7 190 aaKnown RBP3.99□□□□□ -1.77
CCDC178-204ENST00000403303 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP3.99□□□□□ -1.77
CCDC178-204ENST00000403303 RWDD1Q9H446 243 aaPredicted RBP3.99□□□□□ -1.77
CCDC178-204ENST00000403303 SCPEP1Q9HB40 452 aa3.99□□□□□ -1.77
CCDC178-204ENST00000403303 ARHGEF3Q9NR81 526 aa3.99□□□□□ -1.77
CCDC178-204ENST00000403303 X6R8D5 127 aa3.99□□□□□ -1.77
CCDC178-204ENST00000403303 ARAP2Q8WZ64 1704 aa3.98□□□□□ -1.77
CCDC178-204ENST00000403303 POLRMTO00411 1230 aaKnown RBP3.98□□□□□ -1.77
CCDC178-204ENST00000403303 TRIM24O15164 1050 aa3.98□□□□□ -1.77
CCDC178-204ENST00000403303 LRG1P02750 347 aa3.98□□□□□ -1.77
CCDC178-204ENST00000403303 HMGCRP04035 888 aa3.98□□□□□ -1.77
CCDC178-204ENST00000403303 ANXA6P08133 673 aa3.98□□□□□ -1.77
CCDC178-204ENST00000403303 PBLDP30039 288 aaPredicted RBP3.98□□□□□ -1.77
CCDC178-204ENST00000403303 GOLGA8DPQ0D2H9 430 aa3.98□□□□□ -1.77
CCDC178-204ENST00000403303 HFEQ30201 348 aa3.98□□□□□ -1.77
CCDC178-204ENST00000403303 ZSCAN23Q3MJ62 389 aa3.98□□□□□ -1.77
CCDC178-204ENST00000403303 ERMARDQ5T6L9 678 aa3.98□□□□□ -1.77
CCDC178-204ENST00000403303 NAPEPLDQ6IQ20 393 aa3.98□□□□□ -1.77
CCDC178-204ENST00000403303 PPIP5K1Q6PFW1 1433 aa3.98□□□□□ -1.77
CCDC178-204ENST00000403303 ZNF540Q8NDQ6 660 aa3.98□□□□□ -1.77
CCDC178-204ENST00000403303 SHCBP1Q8NEM2 672 aa3.98□□□□□ -1.77
CCDC178-204ENST00000403303 OR7D4Q8NG98 312 aa3.98□□□□□ -1.77
CCDC178-204ENST00000403303 RASSF8Q8NHQ8 419 aa3.98□□□□□ -1.77
CCDC178-204ENST00000403303 TRAF3IP1Q8TDR0 691 aaPredicted RBP3.98□□□□□ -1.77
CCDC178-204ENST00000403303 ALG3Q92685 438 aa3.98□□□□□ -1.77
CCDC178-204ENST00000403303 DACH2Q96NX9 599 aa3.98□□□□□ -1.77
CCDC178-204ENST00000403303 HIST1H2AAQ96QV6 131 aa3.98□□□□□ -1.77
CCDC178-204ENST00000403303 HAPLN3Q96S86 360 aa3.98□□□□□ -1.77
CCDC178-204ENST00000403303 KATNB1Q9BVA0 655 aa3.98□□□□□ -1.77
CCDC178-204ENST00000403303 NECTIN3Q9NQS3 549 aa3.98□□□□□ -1.77
CCDC178-204ENST00000403303 BLOC1S6Q9UL45 172 aa3.98□□□□□ -1.77
CCDC178-204ENST00000403303 RNF150Q9ULK6 438 aa3.98□□□□□ -1.77
CCDC178-204ENST00000403303 KAT6AQ92794 2004 aa3.98□□□□□ -1.77
CCDC178-204ENST00000403303 M0QZQ0 153 aa3.98□□□□□ -1.77
CCDC178-204ENST00000403303 QSOX1O00391 747 aa3.98□□□□□ -1.77
CCDC178-204ENST00000403303 TXNL1O43396 289 aa3.98□□□□□ -1.77
CCDC178-204ENST00000403303 METTL18O95568 372 aa3.98□□□□□ -1.77
CCDC178-204ENST00000403303 F13BP05160 661 aa3.98□□□□□ -1.77
CCDC178-204ENST00000403303 NCF1P14598 390 aaPredicted RBP3.98□□□□□ -1.77
CCDC178-204ENST00000403303 IRAK1P51617 712 aa3.98□□□□□ -1.77
CCDC178-204ENST00000403303 DUSP8Q13202 625 aa3.98□□□□□ -1.77
CCDC178-204ENST00000403303 ARHGEF7Q14155 803 aa3.98□□□□□ -1.77
CCDC178-204ENST00000403303 PREPLQ4J6C6 727 aaPredicted RBP3.98□□□□□ -1.77
CCDC178-204ENST00000403303 ZNF569Q5MCW4 686 aa3.98□□□□□ -1.77
CCDC178-204ENST00000403303 SPOUT1Q5T280 376 aaKnown RBP3.98□□□□□ -1.77
CCDC178-204ENST00000403303 TTC22Q5TAA0 569 aa3.98□□□□□ -1.77
CCDC178-204ENST00000403303 TANGO2Q6ICL3 276 aa3.98□□□□□ -1.77
CCDC178-204ENST00000403303 GRHL2Q6ISB3 625 aa3.98□□□□□ -1.77
CCDC178-204ENST00000403303 MSANTD2Q6P1R3 559 aa3.98□□□□□ -1.77
CCDC178-204ENST00000403303 DRICH1Q6PGQ1 229 aaPredicted RBP3.98□□□□□ -1.77
CCDC178-204ENST00000403303 MEX3BQ6ZN04 569 aaKnown RBP3.98□□□□□ -1.77
CCDC178-204ENST00000403303 SVOPQ8N4V2 548 aa3.98□□□□□ -1.77
CCDC178-204ENST00000403303 IL17RCQ8NAC3 791 aa3.98□□□□□ -1.77
CCDC178-204ENST00000403303 KIF18AQ8NI77 898 aa3.98□□□□□ -1.77
CCDC178-204ENST00000403303 SSH1Q8WYL5 1049 aa3.98□□□□□ -1.77
CCDC178-204ENST00000403303 KAT2AQ92830 837 aa3.98□□□□□ -1.77
CCDC178-204ENST00000403303 ARRDC3Q96B67 414 aa3.98□□□□□ -1.77
CCDC178-204ENST00000403303 KLHL29Q96CT2 875 aa3.98□□□□□ -1.77
CCDC178-204ENST00000403303 PGAP3Q96FM1 320 aaPredicted RBP3.98□□□□□ -1.77
CCDC178-204ENST00000403303 TRIM31Q9BZY9 425 aa3.98□□□□□ -1.77
CCDC178-204ENST00000403303 MRPL18Q9H0U6 180 aaKnown RBP3.98□□□□□ -1.77
CCDC178-204ENST00000403303 PLK3Q9H4B4 646 aa3.98□□□□□ -1.77
CCDC178-204ENST00000403303 MANSC1Q9H8J5 431 aa3.98□□□□□ -1.77
CCDC178-204ENST00000403303 COPS7BQ9H9Q2 264 aaPredicted RBP3.98□□□□□ -1.77
CCDC178-204ENST00000403303 SEMA4BQ9NPR2 832 aaPredicted RBP3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms