RNA–Protein interactions for RNA: ENST00000402105.7

HPS4-203, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best) BASIC

Gene HPS4, Length 3,562 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-203ENST00000402105 STAMBPO95630 424 aa9.39□□□□□ -0.91
HPS4-203ENST00000402105 IQCF3P0C7M6 154 aa9.39□□□□□ -0.91
HPS4-203ENST00000402105 HDCP19113 662 aa9.39□□□□□ -0.91
HPS4-203ENST00000402105 TGM2P21980 687 aa9.39□□□□□ -0.91
HPS4-203ENST00000402105 ABCD1P33897 745 aa9.39□□□□□ -0.91
HPS4-203ENST00000402105 BAG6P46379 1132 aa9.39□□□□□ -0.91
HPS4-203ENST00000402105 CDH15P55291 814 aa9.39□□□□□ -0.91
HPS4-203ENST00000402105 LSAMPQ13449 338 aa9.39□□□□□ -0.91
HPS4-203ENST00000402105 USP10Q14694 798 aaKnown RBP9.39□□□□□ -0.91
HPS4-203ENST00000402105 PDK2Q15119 407 aa9.39□□□□□ -0.91
HPS4-203ENST00000402105 CERCAMQ5T4B2 595 aa9.39□□□□□ -0.91
HPS4-203ENST00000402105 IER5Q5VY09 327 aa9.39□□□□□ -0.91
HPS4-203ENST00000402105 ZNF534Q76KX8 674 aa9.39□□□□□ -0.91
HPS4-203ENST00000402105 DEFB132Q7Z7B7 95 aa9.39□□□□□ -0.91
HPS4-203ENST00000402105 UBR7Q8N806 425 aa9.39□□□□□ -0.91
HPS4-203ENST00000402105 MCUQ8NE86 351 aa9.39□□□□□ -0.91
HPS4-203ENST00000402105 GRIN3AQ8TCU5 1115 aa9.39□□□□□ -0.91
HPS4-203ENST00000402105 EXT2Q93063 718 aa9.39□□□□□ -0.91
HPS4-203ENST00000402105 SORT1Q99523 831 aa9.39□□□□□ -0.91
HPS4-203ENST00000402105 FERMT1Q9BQL6 677 aa9.39□□□□□ -0.91
HPS4-203ENST00000402105 ILKAPQ9H0C8 392 aaPredicted RBP9.39□□□□□ -0.91
HPS4-203ENST00000402105 DPEP3Q9H4B8 488 aa9.39□□□□□ -0.91
HPS4-203ENST00000402105 TMEM165Q9HC07 324 aa9.39□□□□□ -0.91
HPS4-203ENST00000402105 DPP3Q9NY33 737 aa9.39□□□□□ -0.91
HPS4-203ENST00000402105 DTLQ9NZJ0 730 aa9.39□□□□□ -0.91
HPS4-203ENST00000402105 LMCD1Q9NZU5 365 aa9.39□□□□□ -0.91
HPS4-203ENST00000402105 KLK14Q9P0G3 267 aa9.39□□□□□ -0.91
HPS4-203ENST00000402105 PPME1Q9Y570 386 aa9.39□□□□□ -0.91
HPS4-203ENST00000402105 CDY2AQ9Y6F7 541 aa9.39□□□□□ -0.91
HPS4-203ENST00000402105 CDY1Q9Y6F8 540 aa9.39□□□□□ -0.91
HPS4-203ENST00000402105 PLSCR1O15162 318 aa9.38□□□□□ -0.91
HPS4-203ENST00000402105 FARP2O94887 1054 aaPredicted RBP9.38□□□□□ -0.91
HPS4-203ENST00000402105 GNL1P36915 607 aaPredicted RBP9.38□□□□□ -0.91
HPS4-203ENST00000402105 TNFAIP1Q13829 316 aa9.38□□□□□ -0.91
HPS4-203ENST00000402105 GEN1Q17RS7 908 aa9.38□□□□□ -0.91
HPS4-203ENST00000402105 PITRM1Q5JRX3 1037 aa9.38□□□□□ -0.91
HPS4-203ENST00000402105 B3GNT6Q6ZMB0 384 aa9.38□□□□□ -0.91
HPS4-203ENST00000402105 FAM83AQ86UY5 434 aa9.38□□□□□ -0.91
HPS4-203ENST00000402105 FBXO16Q8IX29 292 aaPredicted RBP9.38□□□□□ -0.91
HPS4-203ENST00000402105 ZFP28Q8NHY6 868 aa9.38□□□□□ -0.91
HPS4-203ENST00000402105 ACTRT2Q8TDY3 377 aa9.38□□□□□ -0.91
HPS4-203ENST00000402105 ATP6V1E2Q96A05 226 aa9.38□□□□□ -0.91
HPS4-203ENST00000402105 LENG1Q96BZ8 264 aaPredicted RBP9.38□□□□□ -0.91
HPS4-203ENST00000402105 P2RY11Q96G91 374 aa9.38□□□□□ -0.91
HPS4-203ENST00000402105 PKP2Q99959 881 aa9.38□□□□□ -0.91
HPS4-203ENST00000402105 SLC4A5Q9BY07 1137 aa9.38□□□□□ -0.91
HPS4-203ENST00000402105 FAM49AQ9H0Q0 323 aaPredicted RBP9.38□□□□□ -0.91
HPS4-203ENST00000402105 CXCL16Q9H2A7 254 aa9.38□□□□□ -0.91
HPS4-203ENST00000402105 R3HDMLQ9H3Y0 253 aa9.38□□□□□ -0.91
HPS4-203ENST00000402105 SUDS3Q9H7L9 328 aaPredicted RBP9.38□□□□□ -0.91
HPS4-203ENST00000402105 AURKCQ9UQB9 309 aa9.38□□□□□ -0.91
HPS4-203ENST00000402105 RUVBL2Q9Y230 463 aaKnown RBP9.38□□□□□ -0.91
HPS4-203ENST00000402105 ANKRD33BA6NCL7 494 aa9.38□□□□□ -0.91
HPS4-203ENST00000402105 MFSD11O43934 449 aa9.38□□□□□ -0.91
HPS4-203ENST00000402105 DNAJA2O60884 412 aa9.38□□□□□ -0.91
HPS4-203ENST00000402105 MAFO75444 373 aaPredicted RBP9.38□□□□□ -0.91
HPS4-203ENST00000402105 TSHRP16473 764 aa9.38□□□□□ -0.91
HPS4-203ENST00000402105 GRK2P25098 689 aa9.38□□□□□ -0.91
HPS4-203ENST00000402105 RPL5P46777 297 aaKnown RBP9.38□□□□□ -0.91
HPS4-203ENST00000402105 SULT1E1P49888 294 aa9.38□□□□□ -0.91
HPS4-203ENST00000402105 PITX1P78337 314 aaPredicted RBP9.38□□□□□ -0.91
HPS4-203ENST00000402105 MS4A2Q01362 244 aa9.38□□□□□ -0.91
HPS4-203ENST00000402105 TUBB3Q13509 450 aa9.38□□□□□ -0.91
HPS4-203ENST00000402105 MXD4Q14582 209 aaPredicted RBP9.38□□□□□ -0.91
HPS4-203ENST00000402105 MYLK3Q32MK0 819 aa9.38□□□□□ -0.91
HPS4-203ENST00000402105 LSM12Q3MHD2 195 aaKnown RBP9.38□□□□□ -0.91
HPS4-203ENST00000402105 FSTL4Q6MZW2 842 aa9.38□□□□□ -0.91
HPS4-203ENST00000402105 TSHZ1Q6ZSZ6 1077 aa9.38□□□□□ -0.91
HPS4-203ENST00000402105 JADE3Q92613 823 aa9.38□□□□□ -0.91
HPS4-203ENST00000402105 CSPG4P5Q96PW8 444 aa9.38□□□□□ -0.91
HPS4-203ENST00000402105 KCTD15Q96SI1 283 aaPredicted RBP9.38□□□□□ -0.91
HPS4-203ENST00000402105 APBA2Q99767 749 aa9.38□□□□□ -0.91
HPS4-203ENST00000402105 PRDM12Q9H4Q4 367 aa9.38□□□□□ -0.91
HPS4-203ENST00000402105 WDR41Q9HAD4 459 aa9.38□□□□□ -0.91
HPS4-203ENST00000402105 CHRAC1Q9NRG0 131 aa9.38□□□□□ -0.91
HPS4-203ENST00000402105 MAP3K20Q9NYL2 800 aaKnown RBP9.38□□□□□ -0.91
HPS4-203ENST00000402105 ITGA11Q9UKX5 1188 aa9.38□□□□□ -0.91
HPS4-203ENST00000402105 BARX2Q9UMQ3 279 aaPredicted RBP9.38□□□□□ -0.91
HPS4-203ENST00000402105 V9GYQ6 96 aa9.38□□□□□ -0.91
HPS4-203ENST00000402105 ATP6AP2A0A1C7CYW4 349 aa9.38□□□□□ -0.91
HPS4-203ENST00000402105 C9JVG2 144 aa9.38□□□□□ -0.91
HPS4-203ENST00000402105 ACKR2O00590 384 aa9.38□□□□□ -0.91
HPS4-203ENST00000402105 ATP6AP2O75787 350 aa9.38□□□□□ -0.91
HPS4-203ENST00000402105 FAM58BPP0C7Q3 252 aa9.38□□□□□ -0.91
HPS4-203ENST00000402105 THRAP10827 490 aa9.38□□□□□ -0.91
HPS4-203ENST00000402105 HNRNPLP14866 589 aaKnown RBP eCLIP9.38□□□□□ -0.91
HPS4-203ENST00000402105 CDH5P33151 784 aaPredicted RBP9.38□□□□□ -0.91
HPS4-203ENST00000402105 GRIA4P48058 902 aa9.38□□□□□ -0.91
HPS4-203ENST00000402105 SLC6A3Q01959 620 aa9.38□□□□□ -0.91
HPS4-203ENST00000402105 MAP7D1Q3KQU3 841 aa9.38□□□□□ -0.91
HPS4-203ENST00000402105 KCTD21Q4G0X4 260 aa9.38□□□□□ -0.91
HPS4-203ENST00000402105 SEL1L3Q68CR1 1132 aa9.38□□□□□ -0.91
HPS4-203ENST00000402105 SLC9A4Q6AI14 798 aa9.38□□□□□ -0.91
HPS4-203ENST00000402105 XRRA1Q6P2D8 792 aa9.38□□□□□ -0.91
HPS4-203ENST00000402105 TTC30AQ86WT1 665 aa9.38□□□□□ -0.91
HPS4-203ENST00000402105 MICALL2Q8IY33 904 aa9.38□□□□□ -0.91
HPS4-203ENST00000402105 TMIGD2Q96BF3 282 aa9.38□□□□□ -0.91
HPS4-203ENST00000402105 CERS2Q96G23 380 aa9.38□□□□□ -0.91
HPS4-203ENST00000402105 TBCBQ99426 244 aa9.38□□□□□ -0.91
HPS4-203ENST00000402105 GATA5Q9BWX5 397 aaPredicted RBP9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms