RNA–Protein interactions for RNA: ENST00000401617.6

CLIP4-203, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 5 BASIC

Gene CLIP4, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-203ENST00000401617 LTBP2Q14767 1821 aa12.59□□□□□ -0.39
CLIP4-203ENST00000401617 NYNRINQ9P2P1 1898 aaKnown RBP12.58□□□□□ -0.39
CLIP4-203ENST00000401617 ERI2A8K979 691 aaKnown RBP12.58□□□□□ -0.4
CLIP4-203ENST00000401617 NT5C1B-RDH14C9J2C7 533 aa12.58□□□□□ -0.4
CLIP4-203ENST00000401617 CACNG3O60359 315 aa12.58□□□□□ -0.4
CLIP4-203ENST00000401617 SLC2A3P11169 496 aa12.58□□□□□ -0.4
CLIP4-203ENST00000401617 PSEN1P49768 467 aa12.58□□□□□ -0.4
CLIP4-203ENST00000401617 ATN1P54259 1190 aaPredicted RBP12.58□□□□□ -0.4
CLIP4-203ENST00000401617 ZBTB17Q13105 803 aa12.58□□□□□ -0.4
CLIP4-203ENST00000401617 RNF19BQ6ZMZ0 732 aa12.58□□□□□ -0.4
CLIP4-203ENST00000401617 SLC26A11Q86WA9 606 aa12.58□□□□□ -0.4
CLIP4-203ENST00000401617 LRRC6Q86X45 466 aa12.58□□□□□ -0.4
CLIP4-203ENST00000401617 CCNJLQ8IV13 435 aa12.58□□□□□ -0.4
CLIP4-203ENST00000401617 ZNF683Q8IZ20 524 aa12.58□□□□□ -0.4
CLIP4-203ENST00000401617 GSDMBQ8TAX9 411 aa12.58□□□□□ -0.4
CLIP4-203ENST00000401617 ALKBH8Q96BT7 664 aaKnown RBP12.58□□□□□ -0.4
CLIP4-203ENST00000401617 MAGEB18Q96M61 343 aa12.58□□□□□ -0.4
CLIP4-203ENST00000401617 ZMYND15Q9H091 742 aa12.58□□□□□ -0.4
CLIP4-203ENST00000401617 GBA3Q9H227 469 aa12.58□□□□□ -0.4
CLIP4-203ENST00000401617 CATSPERBQ9H7T0 1116 aa12.58□□□□□ -0.4
CLIP4-203ENST00000401617 SMYD2Q9NRG4 433 aa12.58□□□□□ -0.4
CLIP4-203ENST00000401617 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.58□□□□□ -0.4
CLIP4-203ENST00000401617 FNIP2Q9P278 1114 aa12.58□□□□□ -0.4
CLIP4-203ENST00000401617 KLHL8Q9P2G9 620 aaPredicted RBP12.58□□□□□ -0.4
CLIP4-203ENST00000401617 NUDT5Q9UKK9 219 aa12.58□□□□□ -0.4
CLIP4-203ENST00000401617 TBX21Q9UL17 535 aa12.58□□□□□ -0.4
CLIP4-203ENST00000401617 HS3ST4Q9Y661 456 aa12.58□□□□□ -0.4
CLIP4-203ENST00000401617 IQANK1A0A1B0GTG1 560 aa12.57□□□□□ -0.4
CLIP4-203ENST00000401617 CXorf49A8MYA2 514 aaPredicted RBP12.57□□□□□ -0.4
CLIP4-203ENST00000401617 ZBTB24O43167 697 aaPredicted RBP12.57□□□□□ -0.4
CLIP4-203ENST00000401617 SPAG7O75391 227 aa12.57□□□□□ -0.4
CLIP4-203ENST00000401617 AP2A1O95782 977 aa12.57□□□□□ -0.4
CLIP4-203ENST00000401617 MYCP01106 439 aaPredicted RBP12.57□□□□□ -0.4
CLIP4-203ENST00000401617 ZDHHC11BP0C7U3 371 aa12.57□□□□□ -0.4
CLIP4-203ENST00000401617 SRGAP2BP0DMP2 458 aa12.57□□□□□ -0.4
CLIP4-203ENST00000401617 CPB1P15086 417 aa12.57□□□□□ -0.4
CLIP4-203ENST00000401617 CCNCP24863 283 aa12.57□□□□□ -0.4
CLIP4-203ENST00000401617 SLC18A2Q05940 514 aa12.57□□□□□ -0.4
CLIP4-203ENST00000401617 C4orf33Q8N1A6 199 aa12.57□□□□□ -0.4
CLIP4-203ENST00000401617 BANPQ8N9N5 519 aa12.57□□□□□ -0.4
CLIP4-203ENST00000401617 DEPDC1BQ8WUY9 529 aa12.57□□□□□ -0.4
CLIP4-203ENST00000401617 DYDC1Q8WWB3 177 aa12.57□□□□□ -0.4
CLIP4-203ENST00000401617 STAMBPL1Q96FJ0 436 aa12.57□□□□□ -0.4
CLIP4-203ENST00000401617 OXNAD1Q96HP4 312 aaPredicted RBP12.57□□□□□ -0.4
CLIP4-203ENST00000401617 TEKT5Q96M29 485 aa12.57□□□□□ -0.4
CLIP4-203ENST00000401617 NAT9Q9BTE0 207 aa12.57□□□□□ -0.4
CLIP4-203ENST00000401617 CWH43Q9H720 699 aa12.57□□□□□ -0.4
CLIP4-203ENST00000401617 E9PAM4 449 aa12.57□□□□□ -0.4
CLIP4-203ENST00000401617 INHBAP08476 426 aa12.57□□□□□ -0.4
CLIP4-203ENST00000401617 KRT4P19013 534 aa12.57□□□□□ -0.4
CLIP4-203ENST00000401617 RPA3P35244 121 aaPredicted RBP12.57□□□□□ -0.4
CLIP4-203ENST00000401617 PBX3P40426 434 aa12.57□□□□□ -0.4
CLIP4-203ENST00000401617 TBX4P57082 545 aa12.57□□□□□ -0.4
CLIP4-203ENST00000401617 TRIM60Q495X7 471 aa12.57□□□□□ -0.4
CLIP4-203ENST00000401617 PIK3R6Q5UE93 754 aa12.57□□□□□ -0.4
CLIP4-203ENST00000401617 GKAP1Q5VSY0 366 aaPredicted RBP12.57□□□□□ -0.4
CLIP4-203ENST00000401617 SLC8B1Q6J4K2 584 aa12.57□□□□□ -0.4
CLIP4-203ENST00000401617 RWDD4Q6NW29 188 aaKnown RBP12.57□□□□□ -0.4
CLIP4-203ENST00000401617 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.57□□□□□ -0.4
CLIP4-203ENST00000401617 RGS9BPQ6ZS82 235 aa12.57□□□□□ -0.4
CLIP4-203ENST00000401617 MICALCLQ6ZW33 695 aa12.57□□□□□ -0.4
CLIP4-203ENST00000401617 YTHDF3Q7Z739 585 aaKnown RBP12.57□□□□□ -0.4
CLIP4-203ENST00000401617 C14orf80Q86SX3 495 aa12.57□□□□□ -0.4
CLIP4-203ENST00000401617 SRLQ86TD4 932 aa12.57□□□□□ -0.4
CLIP4-203ENST00000401617 FBXO32Q969P5 355 aa12.57□□□□□ -0.4
CLIP4-203ENST00000401617 CEP295NLQ96MC4 621 aa12.57□□□□□ -0.4
CLIP4-203ENST00000401617 PPP1R12CQ9BZL4 782 aa12.57□□□□□ -0.4
CLIP4-203ENST00000401617 MLXIPLQ9NP71 852 aa12.57□□□□□ -0.4
CLIP4-203ENST00000401617 OLA1Q9NTK5 396 aaKnown RBP12.57□□□□□ -0.4
CLIP4-203ENST00000401617 MTRRQ9UBK8 725 aa12.57□□□□□ -0.4
CLIP4-203ENST00000401617 SLC27A5Q9Y2P5 690 aa12.57□□□□□ -0.4
CLIP4-203ENST00000401617 MAD1L1Q9Y6D9 718 aa12.57□□□□□ -0.4
CLIP4-203ENST00000401617 FAM169AQ9Y6X4 670 aa12.57□□□□□ -0.4
CLIP4-203ENST00000401617 F5H423 210 aaPredicted RBP12.56□□□□□ -0.4
CLIP4-203ENST00000401617 SOAT2O75908 522 aa12.56□□□□□ -0.4
CLIP4-203ENST00000401617 IGLV3-27P01718 113 aa12.56□□□□□ -0.4
CLIP4-203ENST00000401617 FOXN2P32314 431 aa12.56□□□□□ -0.4
CLIP4-203ENST00000401617 RPL10AP62906 217 aaKnown RBP12.56□□□□□ -0.4
CLIP4-203ENST00000401617 IL9RQ01113 521 aa12.56□□□□□ -0.4
CLIP4-203ENST00000401617 TAF10Q12962 218 aa12.56□□□□□ -0.4
CLIP4-203ENST00000401617 TRIP4Q15650 581 aaPredicted RBP12.56□□□□□ -0.4
CLIP4-203ENST00000401617 RASIP1Q5U651 963 aa12.56□□□□□ -0.4
CLIP4-203ENST00000401617 TTC39BQ5VTQ0 682 aaPredicted RBP12.56□□□□□ -0.4
CLIP4-203ENST00000401617 NUGGCQ68CJ6 796 aa12.56□□□□□ -0.4
CLIP4-203ENST00000401617 ITPRIPL1Q6GPH6 555 aa12.56□□□□□ -0.4
CLIP4-203ENST00000401617 CNKSR3Q6P9H4 555 aa12.56□□□□□ -0.4
CLIP4-203ENST00000401617 TRMT10BQ6PF06 316 aaKnown RBP12.56□□□□□ -0.4
CLIP4-203ENST00000401617 LRRC49Q8IUZ0 686 aa12.56□□□□□ -0.4
CLIP4-203ENST00000401617 CACNA2D3Q8IZS8 1091 aa12.56□□□□□ -0.4
CLIP4-203ENST00000401617 ZNF276Q8N554 614 aa12.56□□□□□ -0.4
CLIP4-203ENST00000401617 CNTD1Q8N815 330 aa12.56□□□□□ -0.4
CLIP4-203ENST00000401617 RTL3Q8N8U3 475 aaKnown RBP12.56□□□□□ -0.4
CLIP4-203ENST00000401617 GDAP1Q8TB36 358 aa12.56□□□□□ -0.4
CLIP4-203ENST00000401617 TTC17Q96AE7 1141 aa12.56□□□□□ -0.4
CLIP4-203ENST00000401617 CELF6Q96J87 481 aaKnown RBP12.56□□□□□ -0.4
CLIP4-203ENST00000401617 TRIM56Q9BRZ2 755 aaKnown RBP12.56□□□□□ -0.4
CLIP4-203ENST00000401617 TTLL2Q9BWV7 592 aa12.56□□□□□ -0.4
CLIP4-203ENST00000401617 VN1R3Q9BXE9 311 aa12.56□□□□□ -0.4
CLIP4-203ENST00000401617 CASS4Q9NQ75 786 aa12.56□□□□□ -0.4
CLIP4-203ENST00000401617 PRDM5Q9NQX1 630 aaPredicted RBP12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms