RNA–Protein interactions for RNA: ENST00000397087.7

RAPGEF4-203, Transcript of Rap guanine nucleotide exchange factor 4, humanhuman

TSL 1 (best) BASIC

Gene RAPGEF4, Length 4,120 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4-203ENST00000397087 CDH8P55286 799 aa6.17□□□□□ -1.42
RAPGEF4-203ENST00000397087 FCGRTP55899 365 aa6.17□□□□□ -1.42
RAPGEF4-203ENST00000397087 IGBP1P78318 339 aa6.17□□□□□ -1.42
RAPGEF4-203ENST00000397087 TUSC3Q13454 348 aa6.17□□□□□ -1.42
RAPGEF4-203ENST00000397087 TMED2Q15363 201 aa6.17□□□□□ -1.42
RAPGEF4-203ENST00000397087 AAGABQ6PD74 315 aa6.17□□□□□ -1.42
RAPGEF4-203ENST00000397087 C4orf50Q6ZRC1 276 aa6.17□□□□□ -1.42
RAPGEF4-203ENST00000397087 METTL23Q86XA0 190 aa6.17□□□□□ -1.42
RAPGEF4-203ENST00000397087 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.17□□□□□ -1.42
RAPGEF4-203ENST00000397087 ANKLE1Q8NAG6 615 aa6.17□□□□□ -1.42
RAPGEF4-203ENST00000397087 GPR150Q8NGU9 434 aa6.17□□□□□ -1.42
RAPGEF4-203ENST00000397087 ARNTL2Q8WYA1 636 aa6.17□□□□□ -1.42
RAPGEF4-203ENST00000397087 STAMBPL1Q96FJ0 436 aa6.17□□□□□ -1.42
RAPGEF4-203ENST00000397087 PWWP2AQ96N64 755 aa6.17□□□□□ -1.42
RAPGEF4-203ENST00000397087 GORASP1Q9BQQ3 440 aa6.17□□□□□ -1.42
RAPGEF4-203ENST00000397087 TRIM55Q9BYV6 548 aa6.17□□□□□ -1.42
RAPGEF4-203ENST00000397087 LRRC4Q9HBW1 653 aa6.17□□□□□ -1.42
RAPGEF4-203ENST00000397087 THAP1Q9NVV9 213 aa6.17□□□□□ -1.42
RAPGEF4-203ENST00000397087 APOBEC2Q9Y235 224 aaKnown RBP6.17□□□□□ -1.42
RAPGEF4-203ENST00000397087 MYLKQ15746 1914 aa6.17□□□□□ -1.42
RAPGEF4-203ENST00000397087 KIF26AQ9ULI4 1882 aaPredicted RBP6.16□□□□□ -1.42
RAPGEF4-203ENST00000397087 SCN8AQ9UQD0 1980 aa6.16□□□□□ -1.42
RAPGEF4-203ENST00000397087 OR6C75A6NL08 312 aa6.16□□□□□ -1.42
RAPGEF4-203ENST00000397087 DRGXA6NNA5 263 aa6.16□□□□□ -1.42
RAPGEF4-203ENST00000397087 SPTLC1O15269 473 aa6.16□□□□□ -1.42
RAPGEF4-203ENST00000397087 FYNP06241 537 aa6.16□□□□□ -1.42
RAPGEF4-203ENST00000397087 THP07101 528 aa6.16□□□□□ -1.42
RAPGEF4-203ENST00000397087 SRGAP2BP0DMP2 458 aa6.16□□□□□ -1.42
RAPGEF4-203ENST00000397087 ATP4BP51164 291 aa6.16□□□□□ -1.42
RAPGEF4-203ENST00000397087 MPP3Q13368 585 aa6.16□□□□□ -1.42
RAPGEF4-203ENST00000397087 NAA25Q14CX7 972 aa6.16□□□□□ -1.42
RAPGEF4-203ENST00000397087 UGP2Q16851 508 aa6.16□□□□□ -1.42
RAPGEF4-203ENST00000397087 HHATQ5VTY9 493 aa6.16□□□□□ -1.42
RAPGEF4-203ENST00000397087 RTL10Q7L3V2 364 aa6.16□□□□□ -1.42
RAPGEF4-203ENST00000397087 UMODL1-AS1Q8N2C9 162 aa6.16□□□□□ -1.42
RAPGEF4-203ENST00000397087 FAM71DQ8N9W8 422 aa6.16□□□□□ -1.42
RAPGEF4-203ENST00000397087 TTC16Q8NEE8 873 aa6.16□□□□□ -1.42
RAPGEF4-203ENST00000397087 SLC39A13Q96H72 371 aa6.16□□□□□ -1.42
RAPGEF4-203ENST00000397087 EPAS1Q99814 870 aa6.16□□□□□ -1.42
RAPGEF4-203ENST00000397087 TTLL2Q9BWV7 592 aa6.16□□□□□ -1.42
RAPGEF4-203ENST00000397087 WWP1Q9H0M0 922 aa6.16□□□□□ -1.42
RAPGEF4-203ENST00000397087 KCNK13Q9HB14 408 aa6.16□□□□□ -1.42
RAPGEF4-203ENST00000397087 ETNK1Q9HBU6 452 aa6.16□□□□□ -1.42
RAPGEF4-203ENST00000397087 DMAP1Q9NPF5 467 aaPredicted RBP6.16□□□□□ -1.42
RAPGEF4-203ENST00000397087 VPS45Q9NRW7 570 aa6.16□□□□□ -1.42
RAPGEF4-203ENST00000397087 ZC3H7BQ9UGR2 993 aaKnown RBP6.16□□□□□ -1.42
RAPGEF4-203ENST00000397087 BOLA1Q9Y3E2 137 aa6.16□□□□□ -1.42
RAPGEF4-203ENST00000397087 SERPINA6P08185 405 aa6.16□□□□□ -1.42
RAPGEF4-203ENST00000397087 CD48P09326 243 aa6.16□□□□□ -1.42
RAPGEF4-203ENST00000397087 RPA3P35244 121 aaPredicted RBP6.16□□□□□ -1.42
RAPGEF4-203ENST00000397087 GP5P40197 560 aa6.16□□□□□ -1.42
RAPGEF4-203ENST00000397087 SULT1E1P49888 294 aa6.16□□□□□ -1.42
RAPGEF4-203ENST00000397087 KPNA2P52292 529 aaKnown RBP6.16□□□□□ -1.42
RAPGEF4-203ENST00000397087 LIMK2P53671 638 aa6.16□□□□□ -1.42
RAPGEF4-203ENST00000397087 NFKB2Q00653 900 aa6.16□□□□□ -1.42
RAPGEF4-203ENST00000397087 NSUN2Q08J23 767 aaKnown RBP eCLIP6.16□□□□□ -1.42
RAPGEF4-203ENST00000397087 HIC1Q14526 733 aa6.16□□□□□ -1.42
RAPGEF4-203ENST00000397087 RFTN1Q14699 578 aaPredicted RBP6.16□□□□□ -1.42
RAPGEF4-203ENST00000397087 TSNAXIP1Q2TAA8 658 aa6.16□□□□□ -1.42
RAPGEF4-203ENST00000397087 DNAL1Q4LDG9 190 aa6.16□□□□□ -1.42
RAPGEF4-203ENST00000397087 UBAP2Q5T6F2 1119 aaKnown RBP6.16□□□□□ -1.42
RAPGEF4-203ENST00000397087 PDPK2PQ6A1A2 396 aa6.16□□□□□ -1.42
RAPGEF4-203ENST00000397087 TLDC1Q6P9B6 456 aa6.16□□□□□ -1.42
RAPGEF4-203ENST00000397087 TRAF7Q6Q0C0 670 aa6.16□□□□□ -1.42
RAPGEF4-203ENST00000397087 OTOAQ7RTW8 1153 aa6.16□□□□□ -1.42
RAPGEF4-203ENST00000397087 SETD3Q86TU7 594 aaPredicted RBP6.16□□□□□ -1.42
RAPGEF4-203ENST00000397087 RBBP8Q99708 897 aa6.16□□□□□ -1.42
RAPGEF4-203ENST00000397087 RTP3Q9BQQ7 232 aa6.16□□□□□ -1.42
RAPGEF4-203ENST00000397087 SYT15Q9BQS2 421 aa6.16□□□□□ -1.42
RAPGEF4-203ENST00000397087 VPS37BQ9H9H4 285 aa6.16□□□□□ -1.42
RAPGEF4-203ENST00000397087 ALG13Q9NP73 1137 aaKnown RBP6.16□□□□□ -1.42
RAPGEF4-203ENST00000397087 VTI1BQ9UEU0 232 aa6.16□□□□□ -1.42
RAPGEF4-203ENST00000397087 SNX9Q9Y5X1 595 aa6.16□□□□□ -1.42
RAPGEF4-203ENST00000397087 CYB561D2O14569 222 aa6.16□□□□□ -1.42
RAPGEF4-203ENST00000397087 KCNN4O15554 427 aa6.16□□□□□ -1.42
RAPGEF4-203ENST00000397087 TBC1D4O60343 1298 aa6.16□□□□□ -1.42
RAPGEF4-203ENST00000397087 PEX10O60683 326 aa6.16□□□□□ -1.42
RAPGEF4-203ENST00000397087 LPXNO60711 386 aa6.16□□□□□ -1.42
RAPGEF4-203ENST00000397087 ANXA9O76027 345 aa6.16□□□□□ -1.42
RAPGEF4-203ENST00000397087 EPOP01588 193 aa6.16□□□□□ -1.42
RAPGEF4-203ENST00000397087 POLBP06746 335 aa6.16□□□□□ -1.42
RAPGEF4-203ENST00000397087 ZDHHC11BP0C7U3 371 aa6.16□□□□□ -1.42
RAPGEF4-203ENST00000397087 VAV1P15498 845 aa6.16□□□□□ -1.42
RAPGEF4-203ENST00000397087 RBL1P28749 1068 aa6.16□□□□□ -1.42
RAPGEF4-203ENST00000397087 PPP3CCP48454 512 aa6.16□□□□□ -1.42
RAPGEF4-203ENST00000397087 HNRNPFP52597 415 aaKnown RBP6.16□□□□□ -1.42
RAPGEF4-203ENST00000397087 SLC10A2Q12908 348 aaPredicted RBP6.16□□□□□ -1.42
RAPGEF4-203ENST00000397087 TTLL12Q14166 644 aaPredicted RBP6.16□□□□□ -1.42
RAPGEF4-203ENST00000397087 VARS2Q5ST30 1063 aaKnown RBP6.16□□□□□ -1.42
RAPGEF4-203ENST00000397087 NAPEPLDQ6IQ20 393 aa6.16□□□□□ -1.42
RAPGEF4-203ENST00000397087 RGMBQ6NW40 437 aa6.16□□□□□ -1.42
RAPGEF4-203ENST00000397087 ACOT1Q86TX2 421 aa6.16□□□□□ -1.42
RAPGEF4-203ENST00000397087 PIGZQ86VD9 579 aa6.16□□□□□ -1.42
RAPGEF4-203ENST00000397087 KIF2BQ8N4N8 673 aa6.16□□□□□ -1.42
RAPGEF4-203ENST00000397087 C9orf72Q96LT7 481 aa6.16□□□□□ -1.42
RAPGEF4-203ENST00000397087 NXF3Q9H4D5 531 aaKnown RBP6.16□□□□□ -1.42
RAPGEF4-203ENST00000397087 CATSPERBQ9H7T0 1116 aa6.16□□□□□ -1.42
RAPGEF4-203ENST00000397087 ECT2Q9H8V3 914 aa6.16□□□□□ -1.42
RAPGEF4-203ENST00000397087 CRTAC1Q9NQ79 661 aa6.16□□□□□ -1.42
RAPGEF4-203ENST00000397087 FLRT1Q9NZU1 646 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms