RNA–Protein interactions for RNA: ENST00000396526.7

SNX6-202, Transcript of sorting nexin 6, humanhuman

TSL 1 (best) BASIC

Gene SNX6, Length 3,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-202ENST00000396526 EDF1O60869 148 aaKnown RBP16.54■□□□□ 0.24
SNX6-202ENST00000396526 PAGE1O75459 146 aa16.54■□□□□ 0.24
SNX6-202ENST00000396526 JCHAINP01591 159 aa16.54■□□□□ 0.24
SNX6-202ENST00000396526 MAGEA11P43364 429 aa16.54■□□□□ 0.24
SNX6-202ENST00000396526 SCTRP47872 440 aa16.54■□□□□ 0.24
SNX6-202ENST00000396526 CAP1Q01518 475 aa16.54■□□□□ 0.24
SNX6-202ENST00000396526 MGAT5Q09328 741 aa16.54■□□□□ 0.24
SNX6-202ENST00000396526 FAM182AQ5T1J6 154 aa16.54■□□□□ 0.24
SNX6-202ENST00000396526 STEAP4Q687X5 459 aa16.54■□□□□ 0.24
SNX6-202ENST00000396526 MRPL9Q9BYD2 267 aaKnown RBP16.54■□□□□ 0.24
SNX6-202ENST00000396526 GBA3Q9H227 469 aa16.54■□□□□ 0.24
SNX6-202ENST00000396526 MOCS1Q9NZB8 636 aa16.54■□□□□ 0.24
SNX6-202ENST00000396526 SCML2Q9UQR0 700 aa16.54■□□□□ 0.24
SNX6-202ENST00000396526 RPS6KL1Q9Y6S9 549 aa16.54■□□□□ 0.24
SNX6-202ENST00000396526 TDRD15B5MCY1 1934 aaKnown RBP16.54■□□□□ 0.24
SNX6-202ENST00000396526 DFFAO00273 331 aa16.54■□□□□ 0.24
SNX6-202ENST00000396526 DCTN3O75935 186 aa16.54■□□□□ 0.24
SNX6-202ENST00000396526 CPB1P15086 417 aa16.54■□□□□ 0.24
SNX6-202ENST00000396526 PDE1BQ01064 536 aa16.54■□□□□ 0.24
SNX6-202ENST00000396526 MBTPS1Q14703 1052 aa16.54■□□□□ 0.24
SNX6-202ENST00000396526 TIGD7Q6NT04 549 aaPredicted RBP16.54■□□□□ 0.24
SNX6-202ENST00000396526 AGGF1Q8N302 714 aaeCLIP16.54■□□□□ 0.24
SNX6-202ENST00000396526 MPP5Q8N3R9 675 aa16.54■□□□□ 0.24
SNX6-202ENST00000396526 FAM111AQ96PZ2 611 aa16.54■□□□□ 0.24
SNX6-202ENST00000396526 VANGL2Q9ULK5 521 aa16.54■□□□□ 0.24
SNX6-202ENST00000396526 H7C4K7 107 aa16.54■□□□□ 0.24
SNX6-202ENST00000396526 RTN3O95197 1032 aaPredicted RBP16.54■□□□□ 0.24
SNX6-202ENST00000396526 OAS1P00973 400 aaKnown RBP16.54■□□□□ 0.24
SNX6-202ENST00000396526 CCNCP24863 283 aa16.54■□□□□ 0.24
SNX6-202ENST00000396526 ZNF449Q6P9G9 518 aa16.54■□□□□ 0.24
SNX6-202ENST00000396526 DBF4BQ8NFT6 615 aa16.54■□□□□ 0.24
SNX6-202ENST00000396526 SERAC1Q96JX3 654 aa16.54■□□□□ 0.24
SNX6-202ENST00000396526 FCRL2Q96LA5 508 aaPredicted RBP16.54■□□□□ 0.24
SNX6-202ENST00000396526 TEKT5Q96M29 485 aa16.54■□□□□ 0.24
SNX6-202ENST00000396526 ANLNQ9NQW6 1124 aa16.54■□□□□ 0.24
SNX6-202ENST00000396526 MYO18AQ92614 2054 aaKnown RBP16.53■□□□□ 0.24
SNX6-202ENST00000396526 CXorf49A8MYA2 514 aaPredicted RBP16.53■□□□□ 0.24
SNX6-202ENST00000396526 TNFRSF10BO14763 440 aa16.53■□□□□ 0.24
SNX6-202ENST00000396526 ZBTB24O43167 697 aaPredicted RBP16.53■□□□□ 0.24
SNX6-202ENST00000396526 FAM155BO75949 473 aa16.53■□□□□ 0.24
SNX6-202ENST00000396526 ANXA9O76027 345 aa16.53■□□□□ 0.24
SNX6-202ENST00000396526 MOCS2O96007 188 aaPredicted RBP16.53■□□□□ 0.24
SNX6-202ENST00000396526 IGLV3-25P01717 112 aa16.53■□□□□ 0.24
SNX6-202ENST00000396526 PSEN1P49768 467 aa16.53■□□□□ 0.24
SNX6-202ENST00000396526 ARPP19P56211 112 aa16.53■□□□□ 0.24
SNX6-202ENST00000396526 MROH9Q5TGP6 573 aa16.53■□□□□ 0.24
SNX6-202ENST00000396526 MARK2Q7KZI7 788 aaKnown RBP16.53■□□□□ 0.24
SNX6-202ENST00000396526 SRPK1Q96SB4 655 aaKnown RBP16.53■□□□□ 0.24
SNX6-202ENST00000396526 OXCT2Q9BYC2 517 aaPredicted RBP16.53■□□□□ 0.24
SNX6-202ENST00000396526 RXFP1Q9HBX9 757 aa16.53■□□□□ 0.24
SNX6-202ENST00000396526 OLA1Q9NTK5 396 aaKnown RBP16.53■□□□□ 0.24
SNX6-202ENST00000396526 SFMBT1Q9UHJ3 866 aa16.53■□□□□ 0.24
SNX6-202ENST00000396526 A0A1W2PQH9 124 aa16.53■□□□□ 0.24
SNX6-202ENST00000396526 ENPP3O14638 875 aa16.53■□□□□ 0.24
SNX6-202ENST00000396526 ALDH1A2O94788 518 aa16.53■□□□□ 0.24
SNX6-202ENST00000396526 CRYMQ14894 314 aa16.53■□□□□ 0.24
SNX6-202ENST00000396526 ANO4Q32M45 955 aa16.53■□□□□ 0.24
SNX6-202ENST00000396526 ATG16L1Q676U5 607 aa16.53■□□□□ 0.24
SNX6-202ENST00000396526 TRMT10BQ6PF06 316 aaKnown RBP16.53■□□□□ 0.24
SNX6-202ENST00000396526 TRAF7Q6Q0C0 670 aa16.53■□□□□ 0.24
SNX6-202ENST00000396526 CHSY1Q86X52 802 aa16.53■□□□□ 0.24
SNX6-202ENST00000396526 NDUFAF2Q8N183 169 aa16.53■□□□□ 0.24
SNX6-202ENST00000396526 ACMSDQ8TDX5 336 aa16.53■□□□□ 0.24
SNX6-202ENST00000396526 CELF6Q96J87 481 aaKnown RBP16.53■□□□□ 0.24
SNX6-202ENST00000396526 TSGA13Q96PP4 275 aa16.53■□□□□ 0.24
SNX6-202ENST00000396526 TRIM55Q9BYV6 548 aa16.53■□□□□ 0.24
SNX6-202ENST00000396526 F8W810 466 aa16.52■□□□□ 0.24
SNX6-202ENST00000396526 YWHAQP27348 245 aa16.52■□□□□ 0.24
SNX6-202ENST00000396526 TUBP50607 506 aa16.52■□□□□ 0.24
SNX6-202ENST00000396526 FAM133BQ5BKY9 247 aaKnown RBP16.52■□□□□ 0.24
SNX6-202ENST00000396526 SPPL2BQ8TCT7 592 aa16.52■□□□□ 0.24
SNX6-202ENST00000396526 SLC13A1Q9BZW2 595 aa16.52■□□□□ 0.24
SNX6-202ENST00000396526 FNIP2Q9P278 1114 aa16.52■□□□□ 0.24
SNX6-202ENST00000396526 SNX10Q9Y5X0 201 aa16.52■□□□□ 0.24
SNX6-202ENST00000396526 ACBD5Q5T8D3 534 aaPredicted RBP16.52■□□□□ 0.24
SNX6-202ENST00000396526 NPWQ8N729 165 aa16.52■□□□□ 0.24
SNX6-202ENST00000396526 ATP6V0D2Q8N8Y2 350 aa16.52■□□□□ 0.24
SNX6-202ENST00000396526 OR52K1Q8NGK4 314 aa16.52■□□□□ 0.24
SNX6-202ENST00000396526 ZNF398Q8TD17 642 aa16.52■□□□□ 0.24
SNX6-202ENST00000396526 LINC01599Q8WXQ3 324 aa16.52■□□□□ 0.24
SNX6-202ENST00000396526 SLC17A7Q9P2U7 560 aa16.52■□□□□ 0.24
SNX6-202ENST00000396526 DNAJB4Q9UDY4 337 aa16.52■□□□□ 0.24
SNX6-202ENST00000396526 CSH1P0DML2 217 aa16.52■□□□□ 0.23
SNX6-202ENST00000396526 CSH2P0DML3 217 aa16.52■□□□□ 0.23
SNX6-202ENST00000396526 NFKB1P19838 968 aa16.52■□□□□ 0.23
SNX6-202ENST00000396526 TBX4P57082 545 aa16.52■□□□□ 0.23
SNX6-202ENST00000396526 MTA1Q13330 715 aa16.52■□□□□ 0.23
SNX6-202ENST00000396526 DDR2Q16832 855 aa16.52■□□□□ 0.23
SNX6-202ENST00000396526 NSMCE1Q8WV22 266 aa16.52■□□□□ 0.23
SNX6-202ENST00000396526 CASP10Q92851 521 aa16.52■□□□□ 0.23
SNX6-202ENST00000396526 FBXO32Q969P5 355 aa16.52■□□□□ 0.23
SNX6-202ENST00000396526 LRRC37BQ96QE4 947 aa16.52■□□□□ 0.23
SNX6-202ENST00000396526 TSSK1BQ9BXA7 367 aa16.52■□□□□ 0.23
SNX6-202ENST00000396526 IL22Q9GZX6 179 aa16.52■□□□□ 0.23
SNX6-202ENST00000396526 TLR8Q9NR97 1041 aaKnown RBP16.52■□□□□ 0.23
SNX6-202ENST00000396526 SYBUQ9NX95 663 aa16.52■□□□□ 0.23
SNX6-202ENST00000396526 GRID1Q9ULK0 1009 aa16.52■□□□□ 0.23
SNX6-202ENST00000396526 CFAP73A6NFT4 308 aa16.51■□□□□ 0.23
SNX6-202ENST00000396526 I6L893 689 aaPredicted RBP16.51■□□□□ 0.23
SNX6-202ENST00000396526 SERPINB4P48594 390 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms