RNA–Protein interactions for RNA: ENST00000380743.8

SMN2-203, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SMN2, Length 1,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-203ENST00000380743 SLC2A11Q9BYW1 496 aa13.03□□□□□ -0.32
SMN2-203ENST00000380743 KCND1Q9NSA2 647 aa13.03□□□□□ -0.32
SMN2-203ENST00000380743 NDFIP2Q9NV92 336 aa13.03□□□□□ -0.32
SMN2-203ENST00000380743 DDX56Q9NY93 547 aaKnown RBP13.03□□□□□ -0.32
SMN2-203ENST00000380743 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.03□□□□□ -0.32
SMN2-203ENST00000380743 DEC1Q9P2X7 70 aa13.03□□□□□ -0.32
SMN2-203ENST00000380743 PCDHA3Q9Y5H8 950 aa13.03□□□□□ -0.32
SMN2-203ENST00000380743 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.03□□□□□ -0.32
SMN2-203ENST00000380743 CCDC66A2RUB6 948 aa13.03□□□□□ -0.32
SMN2-203ENST00000380743 LRRD1A4D1F6 860 aa13.03□□□□□ -0.32
SMN2-203ENST00000380743 KRT1P04264 644 aa13.03□□□□□ -0.32
SMN2-203ENST00000380743 RHOQP17081 205 aa13.03□□□□□ -0.32
SMN2-203ENST00000380743 CTNNA2P26232 953 aa13.03□□□□□ -0.32
SMN2-203ENST00000380743 HLA-FP30511 346 aa13.03□□□□□ -0.32
SMN2-203ENST00000380743 CD70P32970 193 aa13.03□□□□□ -0.32
SMN2-203ENST00000380743 HTR7P34969 479 aa13.03□□□□□ -0.32
SMN2-203ENST00000380743 DGKGP49619 791 aa13.03□□□□□ -0.32
SMN2-203ENST00000380743 ZNF135P52742 658 aaPredicted RBP13.03□□□□□ -0.32
SMN2-203ENST00000380743 STARD6P59095 220 aa13.03□□□□□ -0.32
SMN2-203ENST00000380743 PRKCQQ04759 706 aa13.03□□□□□ -0.32
SMN2-203ENST00000380743 KDSRQ06136 332 aa13.03□□□□□ -0.32
SMN2-203ENST00000380743 SIGLEC14Q08ET2 396 aa13.03□□□□□ -0.32
SMN2-203ENST00000380743 ZNF177Q13360 481 aaPredicted RBP13.03□□□□□ -0.32
SMN2-203ENST00000380743 CDH18Q13634 790 aa13.03□□□□□ -0.32
SMN2-203ENST00000380743 DPYSQ14117 519 aa13.03□□□□□ -0.32
SMN2-203ENST00000380743 PDK2Q15119 407 aa13.03□□□□□ -0.32
SMN2-203ENST00000380743 MEI1Q5TIA1 1274 aa13.03□□□□□ -0.32
SMN2-203ENST00000380743 CXorf57Q6NSI4 855 aaKnown RBP13.03□□□□□ -0.32
SMN2-203ENST00000380743 ANKS1BQ7Z6G8 1248 aa13.03□□□□□ -0.32
SMN2-203ENST00000380743 MAP7D3Q8IWC1 876 aa13.03□□□□□ -0.32
SMN2-203ENST00000380743 SFTPA1Q8IWL2 248 aa13.03□□□□□ -0.32
SMN2-203ENST00000380743 KATNAL2Q8IYT4 538 aa13.03□□□□□ -0.32
SMN2-203ENST00000380743 TRIM58Q8NG06 486 aa13.03□□□□□ -0.32
SMN2-203ENST00000380743 OR52K2Q8NGK3 314 aa13.03□□□□□ -0.32
SMN2-203ENST00000380743 FAM3CQ92520 227 aa13.03□□□□□ -0.32
SMN2-203ENST00000380743 ALG3Q92685 438 aa13.03□□□□□ -0.32
SMN2-203ENST00000380743 RNF25Q96BH1 459 aaPredicted RBP13.03□□□□□ -0.32
SMN2-203ENST00000380743 TRIM44Q96DX7 344 aaPredicted RBP13.03□□□□□ -0.32
SMN2-203ENST00000380743 HES6Q96HZ4 224 aa13.03□□□□□ -0.32
SMN2-203ENST00000380743 LMLNQ96KR4 655 aa13.03□□□□□ -0.32
SMN2-203ENST00000380743 PNKPQ96T60 521 aa13.03□□□□□ -0.32
SMN2-203ENST00000380743 ABCB8Q9NUT2 735 aa13.03□□□□□ -0.32
SMN2-203ENST00000380743 TMEM248Q9NWD8 314 aa13.03□□□□□ -0.32
SMN2-203ENST00000380743 TBC1D30Q9Y2I9 924 aa13.03□□□□□ -0.32
SMN2-203ENST00000380743 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.03□□□□□ -0.32
SMN2-203ENST00000380743 DOCK4Q8N1I0 1966 aa13.02□□□□□ -0.32
SMN2-203ENST00000380743 GOLGA6L9A6NEM1 432 aa13.02□□□□□ -0.33
SMN2-203ENST00000380743 H3BRJ5 948 aa13.02□□□□□ -0.33
SMN2-203ENST00000380743 MAN2B1O00754 1011 aa13.02□□□□□ -0.33
SMN2-203ENST00000380743 FGF10O15520 208 aaPredicted RBP13.02□□□□□ -0.33
SMN2-203ENST00000380743 DAPK3O43293 454 aa13.02□□□□□ -0.33
SMN2-203ENST00000380743 ALADP13716 330 aa13.02□□□□□ -0.33
SMN2-203ENST00000380743 ERCC2P18074 760 aa13.02□□□□□ -0.33
SMN2-203ENST00000380743 AMPD1P23109 780 aa13.02□□□□□ -0.33
SMN2-203ENST00000380743 OR1E1P30953 314 aa13.02□□□□□ -0.33
SMN2-203ENST00000380743 ARL4AP40617 200 aa13.02□□□□□ -0.33
SMN2-203ENST00000380743 LMAN2Q12907 356 aa13.02□□□□□ -0.33
SMN2-203ENST00000380743 ANKRD20A8PQ5CZ79 823 aa13.02□□□□□ -0.33
SMN2-203ENST00000380743 TMEM196Q5HYL7 178 aa13.02□□□□□ -0.33
SMN2-203ENST00000380743 GRAMD4Q6IC98 578 aa13.02□□□□□ -0.33
SMN2-203ENST00000380743 ZNF852Q6ZMS4 543 aa13.02□□□□□ -0.33
SMN2-203ENST00000380743 EZH1Q92800 747 aaPredicted RBP13.02□□□□□ -0.33
SMN2-203ENST00000380743 MSANTD3Q96H12 275 aa13.02□□□□□ -0.33
SMN2-203ENST00000380743 COL25A1Q9BXS0 654 aaPredicted RBP13.02□□□□□ -0.33
SMN2-203ENST00000380743 RETREG1Q9H6L5 497 aa13.02□□□□□ -0.33
SMN2-203ENST00000380743 CATSPERBQ9H7T0 1116 aa13.02□□□□□ -0.33
SMN2-203ENST00000380743 ARHGEF4Q9NR80 690 aa13.02□□□□□ -0.33
SMN2-203ENST00000380743 ETNK2Q9NVF9 386 aa13.02□□□□□ -0.33
SMN2-203ENST00000380743 RCOR3Q9P2K3 495 aaPredicted RBP13.02□□□□□ -0.33
SMN2-203ENST00000380743 DNAI1Q9UI46 699 aa13.02□□□□□ -0.33
SMN2-203ENST00000380743 SLC27A6Q9Y2P4 619 aa13.02□□□□□ -0.33
SMN2-203ENST00000380743 MFHAS1Q9Y4C4 1052 aa13.02□□□□□ -0.33
SMN2-203ENST00000380743 CUL9Q8IWT3 2517 aa13.02□□□□□ -0.33
SMN2-203ENST00000380743 A0A0A0MRY4 1105 aa13.01□□□□□ -0.33
SMN2-203ENST00000380743 ANTXRLA6NF34 631 aa13.01□□□□□ -0.33
SMN2-203ENST00000380743 WASH4PA8MWX3 477 aa13.01□□□□□ -0.33
SMN2-203ENST00000380743 MIF4GDA9UHW6 222 aaKnown RBP13.01□□□□□ -0.33
SMN2-203ENST00000380743 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.01□□□□□ -0.33
SMN2-203ENST00000380743 PRRT4C9JH25 899 aa13.01□□□□□ -0.33
SMN2-203ENST00000380743 DDX3YO15523 660 aaKnown RBP13.01□□□□□ -0.33
SMN2-203ENST00000380743 ZRANB2O95218 330 aaKnown RBP eCLIP13.01□□□□□ -0.33
SMN2-203ENST00000380743 KAT7O95251 611 aa13.01□□□□□ -0.33
SMN2-203ENST00000380743 MZF1P28698 734 aaPredicted RBP13.01□□□□□ -0.33
SMN2-203ENST00000380743 GRIA2P42262 883 aa13.01□□□□□ -0.33
SMN2-203ENST00000380743 NUMBP49757 651 aa13.01□□□□□ -0.33
SMN2-203ENST00000380743 DNA2P51530 1060 aa13.01□□□□□ -0.33
SMN2-203ENST00000380743 RWDD2BP57060 319 aa13.01□□□□□ -0.33
SMN2-203ENST00000380743 GEN1Q17RS7 908 aa13.01□□□□□ -0.33
SMN2-203ENST00000380743 ODF2Q5BJF6 829 aa13.01□□□□□ -0.33
SMN2-203ENST00000380743 ZNF569Q5MCW4 686 aa13.01□□□□□ -0.33
SMN2-203ENST00000380743 TMEM215Q68D42 235 aa13.01□□□□□ -0.33
SMN2-203ENST00000380743 FSTL4Q6MZW2 842 aa13.01□□□□□ -0.33
SMN2-203ENST00000380743 C1orf228Q6PIY5 440 aa13.01□□□□□ -0.33
SMN2-203ENST00000380743 MFSD7Q6UXD7 560 aa13.01□□□□□ -0.33
SMN2-203ENST00000380743 TRIM67Q6ZTA4 783 aa13.01□□□□□ -0.33
SMN2-203ENST00000380743 KIAA0907Q7Z7F0 614 aaPredicted RBP13.01□□□□□ -0.33
SMN2-203ENST00000380743 SETD3Q86TU7 594 aaPredicted RBP13.01□□□□□ -0.33
SMN2-203ENST00000380743 CCDC117Q8IWD4 279 aaPredicted RBP13.01□□□□□ -0.33
SMN2-203ENST00000380743 RCOR2Q8IZ40 523 aa13.01□□□□□ -0.33
SMN2-203ENST00000380743 ZNF687Q8N1G0 1237 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms