RNA–Protein interactions for RNA: ENST00000380393.7

PTPRA-204, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 1 (best) BASIC

Gene PTPRA, Length 3,636 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-204ENST00000380393 FGF18O76093 207 aa9.58□□□□□ -0.88
PTPRA-204ENST00000380393 UQCRFS1P1P0C7P4 283 aa9.58□□□□□ -0.88
PTPRA-204ENST00000380393 HOXB1P14653 301 aaPredicted RBP9.58□□□□□ -0.88
PTPRA-204ENST00000380393 RPL10P27635 214 aaKnown RBP9.58□□□□□ -0.88
PTPRA-204ENST00000380393 DCKP27707 260 aa9.58□□□□□ -0.88
PTPRA-204ENST00000380393 PSMC2P35998 433 aaKnown RBP9.58□□□□□ -0.88
PTPRA-204ENST00000380393 RAD23AP54725 363 aa9.58□□□□□ -0.88
PTPRA-204ENST00000380393 EVX2Q03828 476 aa9.58□□□□□ -0.88
PTPRA-204ENST00000380393 RAD51Q06609 339 aa9.58□□□□□ -0.88
PTPRA-204ENST00000380393 CEP55Q53EZ4 464 aa9.58□□□□□ -0.88
PTPRA-204ENST00000380393 GALNT12Q8IXK2 581 aa9.58□□□□□ -0.88
PTPRA-204ENST00000380393 FANK1Q8TC84 345 aa9.58□□□□□ -0.88
PTPRA-204ENST00000380393 LRRC15Q8TF66 581 aa9.58□□□□□ -0.88
PTPRA-204ENST00000380393 SLC44A1Q8WWI5 657 aa9.58□□□□□ -0.88
PTPRA-204ENST00000380393 CEP95Q96GE4 821 aa9.58□□□□□ -0.88
PTPRA-204ENST00000380393 POP1Q99575 1024 aaKnown RBP9.58□□□□□ -0.88
PTPRA-204ENST00000380393 ERVMER34-1Q9H9K5 563 aa9.58□□□□□ -0.88
PTPRA-204ENST00000380393 MCCC2Q9HCC0 563 aa9.58□□□□□ -0.88
PTPRA-204ENST00000380393 SENP1Q9P0U3 644 aa9.58□□□□□ -0.88
PTPRA-204ENST00000380393 ZC3H7BQ9UGR2 993 aaKnown RBP9.58□□□□□ -0.88
PTPRA-204ENST00000380393 ZNF221Q9UK13 617 aa9.58□□□□□ -0.88
PTPRA-204ENST00000380393 PI15O43692 258 aa9.58□□□□□ -0.88
PTPRA-204ENST00000380393 DAB1O75553 588 aa9.58□□□□□ -0.88
PTPRA-204ENST00000380393 RFPL2O75678 378 aa9.58□□□□□ -0.88
PTPRA-204ENST00000380393 ALDH1A2O94788 518 aa9.58□□□□□ -0.88
PTPRA-204ENST00000380393 HSPA6P17066 643 aa9.58□□□□□ -0.88
PTPRA-204ENST00000380393 RBL1P28749 1068 aa9.58□□□□□ -0.88
PTPRA-204ENST00000380393 CPOXP36551 454 aa9.58□□□□□ -0.88
PTPRA-204ENST00000380393 CASP3P42574 277 aa9.58□□□□□ -0.88
PTPRA-204ENST00000380393 MLLT10P55197 1068 aa9.58□□□□□ -0.88
PTPRA-204ENST00000380393 IFITM3Q01628 133 aa9.58□□□□□ -0.88
PTPRA-204ENST00000380393 GALNT2Q10471 571 aa9.58□□□□□ -0.88
PTPRA-204ENST00000380393 NPY5RQ15761 445 aa9.58□□□□□ -0.88
PTPRA-204ENST00000380393 DCUN1D2Q6PH85 259 aa9.58□□□□□ -0.88
PTPRA-204ENST00000380393 ARMC8Q8IUR7 673 aa9.58□□□□□ -0.88
PTPRA-204ENST00000380393 FIBCD1Q8N539 461 aa9.58□□□□□ -0.88
PTPRA-204ENST00000380393 EPS8L1Q8TE68 723 aa9.58□□□□□ -0.88
PTPRA-204ENST00000380393 IDI2Q9BXS1 227 aa9.58□□□□□ -0.88
PTPRA-204ENST00000380393 CPVLQ9H3G5 476 aa9.58□□□□□ -0.88
PTPRA-204ENST00000380393 TNFRSF10DQ9UBN6 386 aa9.58□□□□□ -0.88
PTPRA-204ENST00000380393 FAM8A1Q9UBU6 413 aa9.58□□□□□ -0.88
PTPRA-204ENST00000380393 EIF3LQ9Y262 564 aaKnown RBP9.58□□□□□ -0.88
PTPRA-204ENST00000380393 F8W810 466 aa9.57□□□□□ -0.88
PTPRA-204ENST00000380393 NDUFA2O43678 99 aa9.57□□□□□ -0.88
PTPRA-204ENST00000380393 SULT1B1O43704 296 aa9.57□□□□□ -0.88
PTPRA-204ENST00000380393 ERBB2P04626 1255 aa9.57□□□□□ -0.88
PTPRA-204ENST00000380393 SLC5A1P13866 664 aa9.57□□□□□ -0.88
PTPRA-204ENST00000380393 TTKP33981 857 aa9.57□□□□□ -0.88
PTPRA-204ENST00000380393 DYNLL1P63167 89 aaKnown RBP9.57□□□□□ -0.88
PTPRA-204ENST00000380393 CACNB1Q02641 598 aaPredicted RBP9.57□□□□□ -0.88
PTPRA-204ENST00000380393 STX3Q13277 289 aa9.57□□□□□ -0.88
PTPRA-204ENST00000380393 C4orf46Q504U0 113 aa9.57□□□□□ -0.88
PTPRA-204ENST00000380393 IQSEC1Q6DN90 963 aa9.57□□□□□ -0.88
PTPRA-204ENST00000380393 TP53I13Q8NBR0 393 aaPredicted RBP9.57□□□□□ -0.88
PTPRA-204ENST00000380393 KIAA0895Q8NCT3 520 aa9.57□□□□□ -0.88
PTPRA-204ENST00000380393 AFG1LQ8WV93 481 aa9.57□□□□□ -0.88
PTPRA-204ENST00000380393 SH3YL1Q96HL8 342 aaPredicted RBP9.57□□□□□ -0.88
PTPRA-204ENST00000380393 RILPQ96NA2 401 aa9.57□□□□□ -0.88
PTPRA-204ENST00000380393 DOK1Q99704 481 aa9.57□□□□□ -0.88
PTPRA-204ENST00000380393 C12orf65Q9H3J6 166 aaKnown RBP9.57□□□□□ -0.88
PTPRA-204ENST00000380393 NANOGQ9H9S0 305 aa9.57□□□□□ -0.88
PTPRA-204ENST00000380393 HPS4Q9NQG7 708 aa9.57□□□□□ -0.88
PTPRA-204ENST00000380393 OLAHQ9NV23 265 aa9.57□□□□□ -0.88
PTPRA-204ENST00000380393 FAM25AB3EWG3 89 aa9.57□□□□□ -0.88
PTPRA-204ENST00000380393 FAM25CB3EWG5 89 aa9.57□□□□□ -0.88
PTPRA-204ENST00000380393 FAM25GB3EWG6 89 aa9.57□□□□□ -0.88
PTPRA-204ENST00000380393 NOL4O94818 638 aa9.57□□□□□ -0.88
PTPRA-204ENST00000380393 IFNA14P01570 189 aa9.57□□□□□ -0.88
PTPRA-204ENST00000380393 PROCP04070 461 aa9.57□□□□□ -0.88
PTPRA-204ENST00000380393 RETP07949 1114 aa9.57□□□□□ -0.88
PTPRA-204ENST00000380393 ACTN1P12814 892 aa9.57□□□□□ -0.88
PTPRA-204ENST00000380393 GARTP22102 1010 aa9.57□□□□□ -0.88
PTPRA-204ENST00000380393 SSTR3P32745 418 aaPredicted RBP9.57□□□□□ -0.88
PTPRA-204ENST00000380393 GRM5P41594 1212 aa9.57□□□□□ -0.88
PTPRA-204ENST00000380393 AP3B2Q13367 1082 aa9.57□□□□□ -0.88
PTPRA-204ENST00000380393 ACAP2Q15057 778 aa9.57□□□□□ -0.88
PTPRA-204ENST00000380393 ALX1Q15699 326 aa9.57□□□□□ -0.88
PTPRA-204ENST00000380393 ABCB5Q2M3G0 1257 aa9.57□□□□□ -0.88
PTPRA-204ENST00000380393 PGM2L1Q6PCE3 622 aa9.57□□□□□ -0.88
PTPRA-204ENST00000380393 ZNF571Q7Z3V5 609 aaPredicted RBP9.57□□□□□ -0.88
PTPRA-204ENST00000380393 ZNF677Q86XU0 584 aa9.57□□□□□ -0.88
PTPRA-204ENST00000380393 CCDC33Q8N5R6 958 aa9.57□□□□□ -0.88
PTPRA-204ENST00000380393 ZSWIM2Q8NEG5 633 aa9.57□□□□□ -0.88
PTPRA-204ENST00000380393 CALML4Q96GE6 196 aa9.57□□□□□ -0.88
PTPRA-204ENST00000380393 TBATAQ96M53 351 aa9.57□□□□□ -0.88
PTPRA-204ENST00000380393 AK8Q96MA6 479 aa9.57□□□□□ -0.88
PTPRA-204ENST00000380393 SENP7Q9BQF6 1050 aa9.57□□□□□ -0.88
PTPRA-204ENST00000380393 WDR12Q9GZL7 423 aaKnown RBP9.57□□□□□ -0.88
PTPRA-204ENST00000380393 OSGEPQ9NPF4 335 aa9.57□□□□□ -0.88
PTPRA-204ENST00000380393 MAN2B2Q9Y2E5 1009 aa9.57□□□□□ -0.88
PTPRA-204ENST00000380393 A0A1W2PPM1 405 aa9.57□□□□□ -0.88
PTPRA-204ENST00000380393 C16orf96A6NNT2 1141 aa9.57□□□□□ -0.88
PTPRA-204ENST00000380393 A8MUA0 341 aa9.57□□□□□ -0.88
PTPRA-204ENST00000380393 DEAF1O75398 565 aaPredicted RBP9.57□□□□□ -0.88
PTPRA-204ENST00000380393 CSDE1O75534 798 aaKnown RBP9.57□□□□□ -0.88
PTPRA-204ENST00000380393 DNAJB5O75953 348 aa9.57□□□□□ -0.88
PTPRA-204ENST00000380393 TGDSO95455 350 aa9.57□□□□□ -0.88
PTPRA-204ENST00000380393 ITGALP20701 1170 aa9.57□□□□□ -0.88
PTPRA-204ENST00000380393 TRIM23P36406 574 aa9.57□□□□□ -0.88
PTPRA-204ENST00000380393 COILP38432 576 aaPredicted RBP9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms