RNA–Protein interactions for RNA: ENST00000378726.1

SSU72-204, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 2,238 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-204ENST00000378726 KLHL29Q96CT2 875 aa19.95■□□□□ 0.78
SSU72-204ENST00000378726 EBF2Q9HAK2 575 aa19.95■□□□□ 0.78
SSU72-204ENST00000378726 RAD54BQ9Y620 910 aa19.95■□□□□ 0.78
SSU72-204ENST00000378726 PATJQ8NI35 1801 aa19.94■□□□□ 0.78
SSU72-204ENST00000378726 A0A0A0MRY4 1105 aa19.94■□□□□ 0.78
SSU72-204ENST00000378726 ABHD14A-ACY1A0A1B0GW23 586 aa19.94■□□□□ 0.78
SSU72-204ENST00000378726 FAM92AA1XBS5 289 aa19.94■□□□□ 0.78
SSU72-204ENST00000378726 ADAM12O43184 909 aa19.94■□□□□ 0.78
SSU72-204ENST00000378726 AVILO75366 819 aa19.94■□□□□ 0.78
SSU72-204ENST00000378726 PAGE1O75459 146 aa19.94■□□□□ 0.78
SSU72-204ENST00000378726 RTN3O95197 1032 aaPredicted RBP19.94■□□□□ 0.78
SSU72-204ENST00000378726 FOXN2P32314 431 aa19.94■□□□□ 0.78
SSU72-204ENST00000378726 MAGEA6P43360 314 aa19.94■□□□□ 0.78
SSU72-204ENST00000378726 GPX6P59796 221 aa19.94■□□□□ 0.78
SSU72-204ENST00000378726 PPP2R5DQ14738 602 aa19.94■□□□□ 0.78
SSU72-204ENST00000378726 RWDD4Q6NW29 188 aaKnown RBP19.94■□□□□ 0.78
SSU72-204ENST00000378726 C3orf62Q6ZUJ4 267 aa19.94■□□□□ 0.78
SSU72-204ENST00000378726 C2orf15Q8WU43 125 aaKnown RBP19.94■□□□□ 0.78
SSU72-204ENST00000378726 SPATA17Q96L03 361 aa19.94■□□□□ 0.78
SSU72-204ENST00000378726 MAGEB18Q96M61 343 aa19.94■□□□□ 0.78
SSU72-204ENST00000378726 SPATA13Q96N96 652 aa19.94■□□□□ 0.78
SSU72-204ENST00000378726 SERPINB11Q96P15 392 aa19.94■□□□□ 0.78
SSU72-204ENST00000378726 RXFP1Q9HBX9 757 aa19.94■□□□□ 0.78
SSU72-204ENST00000378726 SEPT10Q9P0V9 454 aa19.94■□□□□ 0.78
SSU72-204ENST00000378726 STK10O94804 968 aaKnown RBP19.94■□□□□ 0.78
SSU72-204ENST00000378726 RPL17P18621 184 aaKnown RBP19.94■□□□□ 0.78
SSU72-204ENST00000378726 SSTR1P30872 391 aa19.94■□□□□ 0.78
SSU72-204ENST00000378726 TAF10Q12962 218 aa19.94■□□□□ 0.78
SSU72-204ENST00000378726 KIAA1841Q6NSI8 718 aa19.94■□□□□ 0.78
SSU72-204ENST00000378726 NPWQ8N729 165 aa19.94■□□□□ 0.78
SSU72-204ENST00000378726 GBP7Q8N8V2 638 aaPredicted RBP19.94■□□□□ 0.78
SSU72-204ENST00000378726 WDR83Q9BRX9 315 aaKnown RBP19.94■□□□□ 0.78
SSU72-204ENST00000378726 VN1R3Q9BXE9 311 aa19.94■□□□□ 0.78
SSU72-204ENST00000378726 FRMD8Q9BZ67 464 aaPredicted RBP19.94■□□□□ 0.78
SSU72-204ENST00000378726 PRDM5Q9NQX1 630 aaPredicted RBP19.94■□□□□ 0.78
SSU72-204ENST00000378726 CLUHO75153 1309 aa19.93■□□□□ 0.78
SSU72-204ENST00000378726 MICAL3Q7RTP6 2002 aa19.93■□□□□ 0.78
SSU72-204ENST00000378726 EXOC1LA0A1B0GW35 172 aa19.93■□□□□ 0.78
SSU72-204ENST00000378726 CLGNO14967 610 aa19.93■□□□□ 0.78
SSU72-204ENST00000378726 NCAM2O15394 837 aa19.93■□□□□ 0.78
SSU72-204ENST00000378726 ANP32DO95626 131 aa19.93■□□□□ 0.78
SSU72-204ENST00000378726 TIMP1P01033 207 aa19.93■□□□□ 0.78
SSU72-204ENST00000378726 CSF2RAP15509 400 aa19.93■□□□□ 0.78
SSU72-204ENST00000378726 OR1D2P34982 312 aa19.93■□□□□ 0.78
SSU72-204ENST00000378726 RPL10AP62906 217 aaKnown RBP19.93■□□□□ 0.78
SSU72-204ENST00000378726 SLC8B1Q6J4K2 584 aa19.93■□□□□ 0.78
SSU72-204ENST00000378726 COLGALT1Q8NBJ5 622 aa19.93■□□□□ 0.78
SSU72-204ENST00000378726 GIPC2Q8TF65 315 aa19.93■□□□□ 0.78
SSU72-204ENST00000378726 FCRL2Q96LA5 508 aaPredicted RBP19.93■□□□□ 0.78
SSU72-204ENST00000378726 ARHGEF3Q9NR81 526 aa19.93■□□□□ 0.78
SSU72-204ENST00000378726 NKIRAS1Q9NYS0 192 aa19.93■□□□□ 0.78
SSU72-204ENST00000378726 ZNF638Q14966 1978 aaKnown RBP19.92■□□□□ 0.78
SSU72-204ENST00000378726 WDR27A2RRH5 827 aa19.92■□□□□ 0.78
SSU72-204ENST00000378726 KCNU1A8MYU2 1149 aa19.92■□□□□ 0.78
SSU72-204ENST00000378726 RNF103O00237 685 aa19.92■□□□□ 0.78
SSU72-204ENST00000378726 C2CD2LO14523 706 aa19.92■□□□□ 0.78
SSU72-204ENST00000378726 CDH16O75309 829 aa19.92■□□□□ 0.78
SSU72-204ENST00000378726 TAC1P20366 129 aa19.92■□□□□ 0.78
SSU72-204ENST00000378726 GBP2P32456 591 aaPredicted RBP19.92■□□□□ 0.78
SSU72-204ENST00000378726 ELK3P41970 407 aa19.92■□□□□ 0.78
SSU72-204ENST00000378726 WASHC5Q12768 1159 aa19.92■□□□□ 0.78
SSU72-204ENST00000378726 PSMD5Q16401 504 aa19.92■□□□□ 0.78
SSU72-204ENST00000378726 RASIP1Q5U651 963 aa19.92■□□□□ 0.78
SSU72-204ENST00000378726 MSANTD2Q6P1R3 559 aa19.92■□□□□ 0.78
SSU72-204ENST00000378726 ASRGL1Q7L266 308 aa19.92■□□□□ 0.78
SSU72-204ENST00000378726 IGDCC3Q8IVU1 814 aa19.92■□□□□ 0.78
SSU72-204ENST00000378726 ATP11CQ8NB49 1132 aa19.92■□□□□ 0.78
SSU72-204ENST00000378726 CEP41Q9BYV8 373 aa19.92■□□□□ 0.78
SSU72-204ENST00000378726 MTRRQ9UBK8 725 aa19.92■□□□□ 0.78
SSU72-204ENST00000378726 STK38LQ9Y2H1 464 aa19.92■□□□□ 0.78
SSU72-204ENST00000378726 TRIM43BA6NCK2 446 aa19.92■□□□□ 0.78
SSU72-204ENST00000378726 POC1B-GALNT4F8VUJ3 575 aa19.92■□□□□ 0.78
SSU72-204ENST00000378726 TBX18O95935 607 aa19.92■□□□□ 0.78
SSU72-204ENST00000378726 MOCS2O96007 188 aaPredicted RBP19.92■□□□□ 0.78
SSU72-204ENST00000378726 PHBP35232 272 aa19.92■□□□□ 0.78
SSU72-204ENST00000378726 SERPINB6P35237 376 aa19.92■□□□□ 0.78
SSU72-204ENST00000378726 CLNS1AP54105 237 aaKnown RBP19.92■□□□□ 0.78
SSU72-204ENST00000378726 DEFB103AP81534 67 aa19.92■□□□□ 0.78
SSU72-204ENST00000378726 CAND1Q86VP6 1230 aaKnown RBP19.92■□□□□ 0.78
SSU72-204ENST00000378726 KIRREL3Q8IZU9 778 aa19.92■□□□□ 0.78
SSU72-204ENST00000378726 MCUQ8NE86 351 aa19.92■□□□□ 0.78
SSU72-204ENST00000378726 NSMCE1Q8WV22 266 aa19.92■□□□□ 0.78
SSU72-204ENST00000378726 TRIM43Q96BQ3 446 aaPredicted RBP19.92■□□□□ 0.78
SSU72-204ENST00000378726 ZNF689Q96CS4 500 aaPredicted RBP19.92■□□□□ 0.78
SSU72-204ENST00000378726 TLR8Q9NR97 1041 aaKnown RBP19.92■□□□□ 0.78
SSU72-204ENST00000378726 EURLQ9NYK6 297 aa19.92■□□□□ 0.78
SSU72-204ENST00000378726 CLIC5Q9NZA1 410 aa19.92■□□□□ 0.78
SSU72-204ENST00000378726 CHMP2BQ9UQN3 213 aa19.92■□□□□ 0.78
SSU72-204ENST00000378726 TLR6Q9Y2C9 796 aa19.92■□□□□ 0.78
SSU72-204ENST00000378726 BACE2Q9Y5Z0 518 aa19.92■□□□□ 0.78
SSU72-204ENST00000378726 OPHN1O60890 802 aa19.91■□□□□ 0.78
SSU72-204ENST00000378726 MX2P20592 715 aa19.91■□□□□ 0.78
SSU72-204ENST00000378726 FDFT1P37268 417 aa19.91■□□□□ 0.78
SSU72-204ENST00000378726 EFEMP1Q12805 493 aa19.91■□□□□ 0.78
SSU72-204ENST00000378726 SEMA5AQ13591 1074 aa19.91■□□□□ 0.78
SSU72-204ENST00000378726 TMED2Q15363 201 aa19.91■□□□□ 0.78
SSU72-204ENST00000378726 RNF168Q8IYW5 571 aaPredicted RBP19.91■□□□□ 0.78
SSU72-204ENST00000378726 THOC1Q96FV9 657 aaKnown RBP19.91■□□□□ 0.78
SSU72-204ENST00000378726 MTPAPQ9NVV4 582 aaKnown RBP eCLIP19.91■□□□□ 0.78
SSU72-204ENST00000378726 COMMD8Q9NX08 183 aa19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms