RNA–Protein interactions for RNA: ENST00000378725.3

SSU72-203, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 619 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-203ENST00000378725 LMAN2Q12907 356 aa19.3■□□□□ 0.68
SSU72-203ENST00000378725 ZNF177Q13360 481 aaPredicted RBP19.3■□□□□ 0.68
SSU72-203ENST00000378725 SLC12A1Q13621 1099 aa19.3■□□□□ 0.68
SSU72-203ENST00000378725 CDH18Q13634 790 aa19.3■□□□□ 0.68
SSU72-203ENST00000378725 MESDQ14696 234 aa19.3■□□□□ 0.68
SSU72-203ENST00000378725 CA9Q16790 459 aa19.3■□□□□ 0.68
SSU72-203ENST00000378725 EMC10Q5UCC4 262 aa19.3■□□□□ 0.68
SSU72-203ENST00000378725 CXorf57Q6NSI4 855 aaKnown RBP19.3■□□□□ 0.68
SSU72-203ENST00000378725 Q6ZS52 159 aa19.3■□□□□ 0.68
SSU72-203ENST00000378725 ADIPOR2Q86V24 386 aa19.3■□□□□ 0.68
SSU72-203ENST00000378725 TEKT4Q8WW24 435 aa19.3■□□□□ 0.68
SSU72-203ENST00000378725 TBC1D31Q96DN5 1066 aa19.3■□□□□ 0.68
SSU72-203ENST00000378725 CALR3Q96L12 384 aaKnown RBP19.3■□□□□ 0.68
SSU72-203ENST00000378725 LACRTQ9GZZ8 138 aa19.3■□□□□ 0.68
SSU72-203ENST00000378725 GPATCH2LQ9NWQ4 482 aa19.3■□□□□ 0.68
SSU72-203ENST00000378725 ELOVL2Q9NXB9 296 aa19.3■□□□□ 0.68
SSU72-203ENST00000378725 MPP6Q9NZW5 540 aa19.3■□□□□ 0.68
SSU72-203ENST00000378725 GGA2Q9UJY4 613 aa19.3■□□□□ 0.68
SSU72-203ENST00000378725 KIAA1549LQ6ZVL6 1849 aa19.3■□□□□ 0.68
SSU72-203ENST00000378725 RARAP10276 462 aa19.29■□□□□ 0.68
SSU72-203ENST00000378725 RHOQP17081 205 aa19.29■□□□□ 0.68
SSU72-203ENST00000378725 SLC1A1P43005 524 aa19.29■□□□□ 0.68
SSU72-203ENST00000378725 NOP2P46087 812 aaKnown RBP19.29■□□□□ 0.68
SSU72-203ENST00000378725 DMC1Q14565 340 aa19.29■□□□□ 0.68
SSU72-203ENST00000378725 EIF4HQ15056 248 aaKnown RBP19.29■□□□□ 0.68
SSU72-203ENST00000378725 HADHQ16836 314 aaKnown RBP19.29■□□□□ 0.68
SSU72-203ENST00000378725 HSF5Q4G112 596 aaPredicted RBP19.29■□□□□ 0.68
SSU72-203ENST00000378725 TXNRD3NBQ6F5E7 133 aa19.29■□□□□ 0.68
SSU72-203ENST00000378725 SETD3Q86TU7 594 aaPredicted RBP19.29■□□□□ 0.68
SSU72-203ENST00000378725 NLRP14Q86W24 1093 aa19.29■□□□□ 0.68
SSU72-203ENST00000378725 CPNE8Q86YQ8 564 aa19.29■□□□□ 0.68
SSU72-203ENST00000378725 AHI1Q8N157 1196 aa19.29■□□□□ 0.68
SSU72-203ENST00000378725 SPEM1Q8N4L4 309 aa19.29■□□□□ 0.68
SSU72-203ENST00000378725 DTWD2Q8NBA8 298 aa19.29■□□□□ 0.68
SSU72-203ENST00000378725 DESI2Q9BSY9 194 aa19.29■□□□□ 0.68
SSU72-203ENST00000378725 DHX35Q9H5Z1 703 aaKnown RBP19.29■□□□□ 0.68
SSU72-203ENST00000378725 SALL4Q9UJQ4 1053 aa19.29■□□□□ 0.68
SSU72-203ENST00000378725 INTS6Q9UL03 887 aaKnown RBP19.29■□□□□ 0.68
SSU72-203ENST00000378725 ADGRG1Q9Y653 693 aa19.29■□□□□ 0.68
SSU72-203ENST00000378725 DUSP10Q9Y6W6 482 aa19.29■□□□□ 0.68
SSU72-203ENST00000378725 WASH4PA8MWX3 477 aa19.28■□□□□ 0.68
SSU72-203ENST00000378725 ATG13O75143 517 aa19.28■□□□□ 0.68
SSU72-203ENST00000378725 HNRNPLP14866 589 aaKnown RBP eCLIP19.28■□□□□ 0.68
SSU72-203ENST00000378725 HCAR3P49019 387 aa19.28■□□□□ 0.68
SSU72-203ENST00000378725 ZNF135P52742 658 aaPredicted RBP19.28■□□□□ 0.68
SSU72-203ENST00000378725 SEC13P55735 322 aa19.28■□□□□ 0.68
SSU72-203ENST00000378725 MTAPQ13126 283 aa19.28■□□□□ 0.68
SSU72-203ENST00000378725 DPYSL2Q16555 572 aa19.28■□□□□ 0.68
SSU72-203ENST00000378725 KCNT1Q5JUK3 1230 aa19.28■□□□□ 0.68
SSU72-203ENST00000378725 PKN3Q6P5Z2 889 aa19.28■□□□□ 0.68
SSU72-203ENST00000378725 KIAA1328Q86T90 577 aa19.28■□□□□ 0.68
SSU72-203ENST00000378725 TXLNBQ8N3L3 684 aa19.28■□□□□ 0.68
SSU72-203ENST00000378725 OR52K2Q8NGK3 314 aa19.28■□□□□ 0.68
SSU72-203ENST00000378725 TTC17Q96AE7 1141 aa19.28■□□□□ 0.68
SSU72-203ENST00000378725 ALG14Q96F25 216 aa19.28■□□□□ 0.68
SSU72-203ENST00000378725 KCTD15Q96SI1 283 aaPredicted RBP19.28■□□□□ 0.68
SSU72-203ENST00000378725 EPAS1Q99814 870 aa19.28■□□□□ 0.68
SSU72-203ENST00000378725 ZWILCHQ9H900 591 aa19.28■□□□□ 0.68
SSU72-203ENST00000378725 TMEM248Q9NWD8 314 aa19.28■□□□□ 0.68
SSU72-203ENST00000378725 OR51B4Q9Y5P0 310 aa19.28■□□□□ 0.68
SSU72-203ENST00000378725 TMEM110-MUSTN1A8MSY1 372 aa19.27■□□□□ 0.68
SSU72-203ENST00000378725 CREB3O43889 395 aa19.27■□□□□ 0.68
SSU72-203ENST00000378725 BUB1BO60566 1050 aaPredicted RBP19.27■□□□□ 0.68
SSU72-203ENST00000378725 TIE1P35590 1138 aa19.27■□□□□ 0.68
SSU72-203ENST00000378725 TAS2R40P59535 323 aa19.27■□□□□ 0.68
SSU72-203ENST00000378725 FUT11Q495W5 492 aa19.27■□□□□ 0.68
SSU72-203ENST00000378725 C2orf27AQ580R0 203 aa19.27■□□□□ 0.68
SSU72-203ENST00000378725 PITRM1Q5JRX3 1037 aa19.27■□□□□ 0.68
SSU72-203ENST00000378725 MBLAC2Q68D91 279 aa19.27■□□□□ 0.68
SSU72-203ENST00000378725 RWDD4Q6NW29 188 aaKnown RBP19.27■□□□□ 0.68
SSU72-203ENST00000378725 IL17RCQ8NAC3 791 aa19.27■□□□□ 0.68
SSU72-203ENST00000378725 RPLP0P6Q8NHW5 317 aa19.27■□□□□ 0.68
SSU72-203ENST00000378725 FAM71BQ8TC56 605 aa19.27■□□□□ 0.68
SSU72-203ENST00000378725 UCMAQ8WVF2 138 aa19.27■□□□□ 0.68
SSU72-203ENST00000378725 PPP1R9BQ96SB3 815 aa19.27■□□□□ 0.68
SSU72-203ENST00000378725 FEM1AQ9BSK4 669 aa19.27■□□□□ 0.68
SSU72-203ENST00000378725 ILVBLA1L0T0 632 aa19.26■□□□□ 0.67
SSU72-203ENST00000378725 NPC1O15118 1278 aa19.26■□□□□ 0.67
SSU72-203ENST00000378725 MZF1P28698 734 aaPredicted RBP19.26■□□□□ 0.67
SSU72-203ENST00000378725 EPHB2P29323 1055 aa19.26■□□□□ 0.67
SSU72-203ENST00000378725 OR1E1P30953 314 aa19.26■□□□□ 0.67
SSU72-203ENST00000378725 CSKP41240 450 aa19.26■□□□□ 0.67
SSU72-203ENST00000378725 SSR1P43307 286 aaKnown RBP19.26■□□□□ 0.67
SSU72-203ENST00000378725 MAPKAPK2P49137 400 aa19.26■□□□□ 0.67
SSU72-203ENST00000378725 ARSEP51690 589 aa19.26■□□□□ 0.67
SSU72-203ENST00000378725 KIF5AQ12840 1032 aa19.26■□□□□ 0.67
SSU72-203ENST00000378725 E2F5Q15329 346 aa19.26■□□□□ 0.67
SSU72-203ENST00000378725 SMTNL2Q2TAL5 461 aa19.26■□□□□ 0.67
SSU72-203ENST00000378725 PLEKHG6Q3KR16 790 aa19.26■□□□□ 0.67
SSU72-203ENST00000378725 C6orf118Q5T5N4 469 aa19.26■□□□□ 0.67
SSU72-203ENST00000378725 EGFLAMQ63HQ2 1017 aa19.26■□□□□ 0.67
SSU72-203ENST00000378725 ZNF783Q6ZMS7 281 aa19.26■□□□□ 0.67
SSU72-203ENST00000378725 POLNQ7Z5Q5 900 aa19.26■□□□□ 0.67
SSU72-203ENST00000378725 TFAP2DQ7Z6R9 452 aa19.26■□□□□ 0.67
SSU72-203ENST00000378725 C1orf210Q8IVY1 113 aa19.26■□□□□ 0.67
SSU72-203ENST00000378725 APCDD1Q8J025 514 aa19.26■□□□□ 0.67
SSU72-203ENST00000378725 ZNF513Q8N8E2 541 aaPredicted RBP19.26■□□□□ 0.67
SSU72-203ENST00000378725 TPCN2Q8NHX9 752 aa19.26■□□□□ 0.67
SSU72-203ENST00000378725 THAP10Q9P2Z0 257 aaPredicted RBP19.26■□□□□ 0.67
SSU72-203ENST00000378725 ALG6Q9Y672 507 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms