RNA–Protein interactions for RNA: ENST00000375663.7

VARS-215, Transcript of valyl-tRNA synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-215ENST00000375663 S100A14Q9HCY8 104 aa17.15■□□□□ 0.34
VARS-215ENST00000375663 OLA1Q9NTK5 396 aaKnown RBP17.15■□□□□ 0.34
VARS-215ENST00000375663 CHCHD3Q9NX63 227 aaKnown RBP17.15■□□□□ 0.34
VARS-215ENST00000375663 ZNF286BP0CG31 522 aa17.15■□□□□ 0.34
VARS-215ENST00000375663 UQCRBP14927 111 aa17.15■□□□□ 0.34
VARS-215ENST00000375663 CRHR1P34998 444 aa17.15■□□□□ 0.34
VARS-215ENST00000375663 ADARP55265 1226 aaKnown RBP17.15■□□□□ 0.34
VARS-215ENST00000375663 TIGD7Q6NT04 549 aaPredicted RBP17.15■□□□□ 0.34
VARS-215ENST00000375663 NT5DC4Q86YG4 428 aa17.15■□□□□ 0.34
VARS-215ENST00000375663 TNIP2Q8NFZ5 429 aa17.15■□□□□ 0.34
VARS-215ENST00000375663 RCN3Q96D15 328 aa17.15■□□□□ 0.34
VARS-215ENST00000375663 ZMAT2Q96NC0 199 aaKnown RBP17.15■□□□□ 0.34
VARS-215ENST00000375663 RNF19AQ9NV58 838 aa17.15■□□□□ 0.34
VARS-215ENST00000375663 PKP3Q9Y446 797 aa17.15■□□□□ 0.34
VARS-215ENST00000375663 YBX3P16989 372 aaKnown RBP eCLIP17.14■□□□□ 0.334e-8■□□□□ 11
VARS-215ENST00000375663 GOT1P17174 413 aa17.14■□□□□ 0.33
VARS-215ENST00000375663 CLK1P49759 484 aaKnown RBP17.14■□□□□ 0.33
VARS-215ENST00000375663 OTUD3Q5T2D3 398 aaPredicted RBP17.14■□□□□ 0.33
VARS-215ENST00000375663 ABHD15Q6UXT9 468 aa17.14■□□□□ 0.33
VARS-215ENST00000375663 MICU2Q8IYU8 434 aa17.14■□□□□ 0.33
VARS-215ENST00000375663 FBXW8Q8N3Y1 598 aa17.14■□□□□ 0.33
VARS-215ENST00000375663 PLD5Q8N7P1 536 aa17.14■□□□□ 0.33
VARS-215ENST00000375663 SNX15Q9NRS6 342 aa17.14■□□□□ 0.33
VARS-215ENST00000375663 NCF1BA6NI72 391 aaPredicted RBP17.14■□□□□ 0.33
VARS-215ENST00000375663 NCF1CA8MVU1 366 aaPredicted RBP17.14■□□□□ 0.33
VARS-215ENST00000375663 CLASP2O75122 1294 aaKnown RBP17.14■□□□□ 0.33
VARS-215ENST00000375663 NCF1P14598 390 aaPredicted RBP17.14■□□□□ 0.33
VARS-215ENST00000375663 GDF10P55107 478 aa17.14■□□□□ 0.33
VARS-215ENST00000375663 GALNTL6Q49A17 601 aa17.14■□□□□ 0.33
VARS-215ENST00000375663 SERAC1Q96JX3 654 aa17.14■□□□□ 0.33
VARS-215ENST00000375663 SEPHS2Q99611 448 aa17.14■□□□□ 0.33
VARS-215ENST00000375663 RBBP8Q99708 897 aa17.14■□□□□ 0.33
VARS-215ENST00000375663 PIF1Q9H611 641 aa17.14■□□□□ 0.33
VARS-215ENST00000375663 C6orf203Q9P0P8 240 aaPredicted RBP17.14■□□□□ 0.33
VARS-215ENST00000375663 PSMD12O00232 456 aaPredicted RBP17.14■□□□□ 0.33
VARS-215ENST00000375663 FKBP9O95302 570 aa17.14■□□□□ 0.33
VARS-215ENST00000375663 FCGR1AP12314 374 aa17.14■□□□□ 0.33
VARS-215ENST00000375663 MSX2P35548 267 aaPredicted RBP17.14■□□□□ 0.33
VARS-215ENST00000375663 GRIA4P48058 902 aa17.14■□□□□ 0.33
VARS-215ENST00000375663 NUMBP49757 651 aa17.14■□□□□ 0.33
VARS-215ENST00000375663 SCARA3Q6AZY7 606 aa17.14■□□□□ 0.33
VARS-215ENST00000375663 FKBP9P1Q75LS8 142 aa17.14■□□□□ 0.33
VARS-215ENST00000375663 HPS6Q86YV9 775 aa17.14■□□□□ 0.33
VARS-215ENST00000375663 PQLC1Q8N2U9 271 aa17.14■□□□□ 0.33
VARS-215ENST00000375663 NETO2Q8NC67 525 aa17.14■□□□□ 0.33
VARS-215ENST00000375663 IL22Q9GZX6 179 aa17.14■□□□□ 0.33
VARS-215ENST00000375663 BRD8Q9H0E9 1235 aa17.14■□□□□ 0.33
VARS-215ENST00000375663 NKX1-2Q9UD57 310 aaPredicted RBP17.14■□□□□ 0.33
VARS-215ENST00000375663 ADAM28Q9UKQ2 775 aa17.14■□□□□ 0.33
VARS-215ENST00000375663 ERI2A8K979 691 aaKnown RBP17.13■□□□□ 0.33
VARS-215ENST00000375663 SLC5A9Q2M3M2 681 aa17.13■□□□□ 0.33
VARS-215ENST00000375663 LIN52Q52LA3 116 aa17.13■□□□□ 0.33
VARS-215ENST00000375663 LRRC8BQ6P9F7 803 aa17.13■□□□□ 0.33
VARS-215ENST00000375663 RBM44Q6ZP01 1051 aaKnown RBP17.13■□□□□ 0.33
VARS-215ENST00000375663 ANKRD13AQ8IZ07 590 aa17.13■□□□□ 0.33
VARS-215ENST00000375663 NDNQ99608 321 aa17.13■□□□□ 0.33
VARS-215ENST00000375663 NT5MQ9NPB1 228 aa17.13■□□□□ 0.33
VARS-215ENST00000375663 MORF4L1Q9UBU8 362 aa17.13■□□□□ 0.33
VARS-215ENST00000375663 TIMM13Q9Y5L4 95 aaPredicted RBP17.13■□□□□ 0.33
VARS-215ENST00000375663 TMEM63AO94886 807 aa17.13■□□□□ 0.33
VARS-215ENST00000375663 GJB1P08034 283 aa17.13■□□□□ 0.33
VARS-215ENST00000375663 CCNB1P14635 433 aa17.13■□□□□ 0.33
VARS-215ENST00000375663 PTPRAP18433 802 aa17.13■□□□□ 0.33
VARS-215ENST00000375663 PAN2Q504Q3 1202 aaKnown RBP17.13■□□□□ 0.33
VARS-215ENST00000375663 CCDC81Q6ZN84 652 aa17.13■□□□□ 0.33
VARS-215ENST00000375663 XYLT1Q86Y38 959 aa17.13■□□□□ 0.33
VARS-215ENST00000375663 TFAP2BQ92481 460 aa17.13■□□□□ 0.33
VARS-215ENST00000375663 RPRD1AQ96P16 312 aaPredicted RBP17.13■□□□□ 0.33
VARS-215ENST00000375663 NTPCRQ9BSD7 190 aaKnown RBP17.13■□□□□ 0.33
VARS-215ENST00000375663 POMKQ9H5K3 350 aa17.13■□□□□ 0.33
VARS-215ENST00000375663 SCN3BQ9NY72 215 aa17.13■□□□□ 0.33
VARS-215ENST00000375663 FZD1Q9UP38 647 aa17.13■□□□□ 0.33
VARS-215ENST00000375663 RAP2CQ9Y3L5 183 aa17.13■□□□□ 0.33
VARS-215ENST00000375663 AP4B1Q9Y6B7 739 aa17.13■□□□□ 0.33
VARS-215ENST00000375663 A0A087WXM4 84 aa17.13■□□□□ 0.33
VARS-215ENST00000375663 FAM95CA0A1B0GW59 222 aa17.13■□□□□ 0.33
VARS-215ENST00000375663 CAPN8A6NHC0 703 aa17.13■□□□□ 0.33
VARS-215ENST00000375663 GBE1Q04446 702 aa17.13■□□□□ 0.33
VARS-215ENST00000375663 CCDC92Q53HC0 331 aaPredicted RBP17.13■□□□□ 0.33
VARS-215ENST00000375663 ZRANB3Q5FWF4 1079 aa17.13■□□□□ 0.33
VARS-215ENST00000375663 PTRHD1Q6GMV3 140 aaKnown RBP17.13■□□□□ 0.33
VARS-215ENST00000375663 VAT1Q99536 393 aa17.13■□□□□ 0.33
VARS-215ENST00000375663 ZCWPW1Q9H0M4 648 aa17.13■□□□□ 0.33
VARS-215ENST00000375663 CDHR5Q9HBB8 845 aa17.13■□□□□ 0.33
VARS-215ENST00000375663 DDX28Q9NUL7 540 aaKnown RBP17.13■□□□□ 0.33
VARS-215ENST00000375663 TBX10O75333 385 aa17.12■□□□□ 0.33
VARS-215ENST00000375663 DAB1O75553 588 aa17.12■□□□□ 0.33
VARS-215ENST00000375663 NOS2P35228 1153 aa17.12■□□□□ 0.33
VARS-215ENST00000375663 NEK2P51955 445 aa17.12■□□□□ 0.33
VARS-215ENST00000375663 NR1H2P55055 460 aa17.12■□□□□ 0.33
VARS-215ENST00000375663 SNAPC2Q13487 334 aa17.12■□□□□ 0.33
VARS-215ENST00000375663 SLC27A1Q6PCB7 646 aa17.12■□□□□ 0.33
VARS-215ENST00000375663 GLIS1Q8NBF1 620 aa17.12■□□□□ 0.33
VARS-215ENST00000375663 TSPAN14Q8NG11 270 aa17.12■□□□□ 0.33
VARS-215ENST00000375663 RP9Q8TA86 221 aaKnown RBP17.12■□□□□ 0.33
VARS-215ENST00000375663 L3MBTL3Q96JM7 780 aaPredicted RBP17.12■□□□□ 0.33
VARS-215ENST00000375663 ZNF570Q96NI8 536 aa17.12■□□□□ 0.33
VARS-215ENST00000375663 GORASP1Q9BQQ3 440 aa17.12■□□□□ 0.33
VARS-215ENST00000375663 XPNPEP1Q9NQW7 623 aa17.12■□□□□ 0.33
VARS-215ENST00000375663 SETD4Q9NVD3 440 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms