RNA–Protein interactions for RNA: ENST00000375340.10

SMC1A-202, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 1 (best) BASIC

Gene SMC1A, Length 9,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-202ENST00000375340 TNPO2O14787 897 aaKnown RBP6.67□□□□□ -1.34
SMC1A-202ENST00000375340 GAS2O43903 313 aaKnown RBP6.67□□□□□ -1.34
SMC1A-202ENST00000375340 PNPLA4P41247 253 aa6.67□□□□□ -1.34
SMC1A-202ENST00000375340 CCDC92Q53HC0 331 aaPredicted RBP6.67□□□□□ -1.34
SMC1A-202ENST00000375340 ZBTB46Q86UZ6 589 aa6.67□□□□□ -1.34
SMC1A-202ENST00000375340 CHSY1Q86X52 802 aa6.67□□□□□ -1.34
SMC1A-202ENST00000375340 C10orf82Q8WW14 230 aa6.67□□□□□ -1.34
SMC1A-202ENST00000375340 ZNF516Q92618 1163 aa6.67□□□□□ -1.34
SMC1A-202ENST00000375340 RCN3Q96D15 328 aa6.67□□□□□ -1.34
SMC1A-202ENST00000375340 PRPF18Q99633 342 aaKnown RBP6.67□□□□□ -1.34
SMC1A-202ENST00000375340 BCORQ6W2J9 1755 aa6.67□□□□□ -1.34
SMC1A-202ENST00000375340 SP100P23497 879 aaPredicted RBP6.67□□□□□ -1.34
SMC1A-202ENST00000375340 PARP6Q2NL67 630 aa6.67□□□□□ -1.34
SMC1A-202ENST00000375340 PTPN20Q4JDL3 420 aa6.67□□□□□ -1.34
SMC1A-202ENST00000375340 TTC7BQ86TV6 843 aa6.67□□□□□ -1.34
SMC1A-202ENST00000375340 HPS6Q86YV9 775 aa6.67□□□□□ -1.34
SMC1A-202ENST00000375340 OPTNQ96CV9 577 aa6.67□□□□□ -1.34
SMC1A-202ENST00000375340 RNF157Q96PX1 679 aa6.67□□□□□ -1.34
SMC1A-202ENST00000375340 THUMPD3Q9BV44 507 aaKnown RBP6.67□□□□□ -1.34
SMC1A-202ENST00000375340 TRIM62Q9BVG3 475 aa6.67□□□□□ -1.34
SMC1A-202ENST00000375340 SLC4A5Q9BY07 1137 aa6.67□□□□□ -1.34
SMC1A-202ENST00000375340 MORF4L1Q9UBU8 362 aa6.67□□□□□ -1.34
SMC1A-202ENST00000375340 PLLPQ9Y342 182 aa6.67□□□□□ -1.34
SMC1A-202ENST00000375340 RIPK3Q9Y572 518 aa6.67□□□□□ -1.34
SMC1A-202ENST00000375340 A0A0A0MRY4 1105 aa6.67□□□□□ -1.34
SMC1A-202ENST00000375340 TRIM13O60858 407 aa6.67□□□□□ -1.34
SMC1A-202ENST00000375340 POMCP01189 267 aa6.67□□□□□ -1.34
SMC1A-202ENST00000375340 ITGA2BP08514 1039 aa6.67□□□□□ -1.34
SMC1A-202ENST00000375340 OR1G1P47890 313 aa6.67□□□□□ -1.34
SMC1A-202ENST00000375340 SERPINB10P48595 397 aa6.67□□□□□ -1.34
SMC1A-202ENST00000375340 TRAF2Q12933 501 aa6.67□□□□□ -1.34
SMC1A-202ENST00000375340 POLD3Q15054 466 aaPredicted RBP6.67□□□□□ -1.34
SMC1A-202ENST00000375340 CCDC85BQ15834 202 aaPredicted RBP6.67□□□□□ -1.34
SMC1A-202ENST00000375340 OTUD3Q5T2D3 398 aaPredicted RBP6.67□□□□□ -1.34
SMC1A-202ENST00000375340 SATL1Q86VE3 508 aa6.67□□□□□ -1.34
SMC1A-202ENST00000375340 MPP5Q8N3R9 675 aa6.67□□□□□ -1.34
SMC1A-202ENST00000375340 SPATA13Q96N96 652 aa6.67□□□□□ -1.34
SMC1A-202ENST00000375340 TMEM134Q9H6X4 195 aa6.67□□□□□ -1.34
SMC1A-202ENST00000375340 C5orf60A6NFR6 353 aa6.67□□□□□ -1.34
SMC1A-202ENST00000375340 HNRNPLP14866 589 aaKnown RBP eCLIP6.67□□□□□ -1.34
SMC1A-202ENST00000375340 ECHS1P30084 290 aa6.67□□□□□ -1.34
SMC1A-202ENST00000375340 THPOP40225 353 aa6.67□□□□□ -1.34
SMC1A-202ENST00000375340 GABRB2P47870 512 aa6.67□□□□□ -1.34
SMC1A-202ENST00000375340 SPIRE1Q08AE8 756 aa6.67□□□□□ -1.34
SMC1A-202ENST00000375340 PTRHD1Q6GMV3 140 aaKnown RBP6.67□□□□□ -1.34
SMC1A-202ENST00000375340 MARK2Q7KZI7 788 aaKnown RBP6.67□□□□□ -1.34
SMC1A-202ENST00000375340 PYROXD2Q8N2H3 581 aa6.67□□□□□ -1.34
SMC1A-202ENST00000375340 CCDC185Q8N715 623 aa6.67□□□□□ -1.34
SMC1A-202ENST00000375340 ZFRQ96KR1 1074 aaKnown RBP6.67□□□□□ -1.34
SMC1A-202ENST00000375340 S100A14Q9HCY8 104 aa6.67□□□□□ -1.34
SMC1A-202ENST00000375340 TUBGCP4Q9UGJ1 667 aa6.67□□□□□ -1.34
SMC1A-202ENST00000375340 HMGXB4Q9UGU5 601 aa6.67□□□□□ -1.34
SMC1A-202ENST00000375340 TRMT6Q9UJA5 497 aaKnown RBP6.67□□□□□ -1.34
SMC1A-202ENST00000375340 MRASO14807 208 aa6.67□□□□□ -1.34
SMC1A-202ENST00000375340 CLASP2O75122 1294 aaKnown RBP6.67□□□□□ -1.34
SMC1A-202ENST00000375340 ZNF682O95780 498 aa6.67□□□□□ -1.34
SMC1A-202ENST00000375340 TFAP2BQ92481 460 aa6.67□□□□□ -1.34
SMC1A-202ENST00000375340 ELOVL4Q9GZR5 314 aa6.67□□□□□ -1.34
SMC1A-202ENST00000375340 TKTL2Q9H0I9 626 aa6.67□□□□□ -1.34
SMC1A-202ENST00000375340 EBF3Q9H4W6 596 aa6.67□□□□□ -1.34
SMC1A-202ENST00000375340 CDH22Q9UJ99 828 aa6.67□□□□□ -1.34
SMC1A-202ENST00000375340 DSEQ9UL01 958 aa6.67□□□□□ -1.34
SMC1A-202ENST00000375340 ABT1Q9ULW3 272 aaKnown RBP6.67□□□□□ -1.34
SMC1A-202ENST00000375340 BTRCQ9Y297 605 aa6.67□□□□□ -1.34
SMC1A-202ENST00000375340 INPP4BO15327 924 aa6.67□□□□□ -1.34
SMC1A-202ENST00000375340 CST3P01034 146 aaPredicted RBP6.67□□□□□ -1.34
SMC1A-202ENST00000375340 CYP2C8P10632 490 aa6.67□□□□□ -1.34
SMC1A-202ENST00000375340 FMO4P31512 558 aa6.67□□□□□ -1.34
SMC1A-202ENST00000375340 FKBP1AP62942 108 aaKnown RBP6.67□□□□□ -1.34
SMC1A-202ENST00000375340 C16orf72Q14CZ0 275 aa6.67□□□□□ -1.34
SMC1A-202ENST00000375340 SYTL3Q4VX76 610 aa6.67□□□□□ -1.34
SMC1A-202ENST00000375340 MTX3Q5HYI7 312 aa6.67□□□□□ -1.34
SMC1A-202ENST00000375340 KIAA0319LQ8IZA0 1049 aa6.67□□□□□ -1.34
SMC1A-202ENST00000375340 SLC44A1Q8WWI5 657 aa6.67□□□□□ -1.34
SMC1A-202ENST00000375340 AZIN2Q96A70 460 aa6.67□□□□□ -1.34
SMC1A-202ENST00000375340 LENG9Q96B70 501 aa6.67□□□□□ -1.34
SMC1A-202ENST00000375340 FAR2Q96K12 515 aa6.67□□□□□ -1.34
SMC1A-202ENST00000375340 PDGFCQ9NRA1 345 aa6.67□□□□□ -1.34
SMC1A-202ENST00000375340 DDX28Q9NUL7 540 aaKnown RBP6.67□□□□□ -1.34
SMC1A-202ENST00000375340 WWOXQ9NZC7 414 aa6.67□□□□□ -1.34
SMC1A-202ENST00000375340 ZMYM5Q9UJ78 669 aa6.67□□□□□ -1.34
SMC1A-202ENST00000375340 CACNA1SQ13698 1873 aa6.67□□□□□ -1.34
SMC1A-202ENST00000375340 SPATA31C2B4DYI2 1134 aa6.67□□□□□ -1.34
SMC1A-202ENST00000375340 ACKR2O00590 384 aa6.67□□□□□ -1.34
SMC1A-202ENST00000375340 NFKB1P19838 968 aa6.67□□□□□ -1.34
SMC1A-202ENST00000375340 TRPC1P48995 793 aa6.67□□□□□ -1.34
SMC1A-202ENST00000375340 AQP4P55087 323 aa6.67□□□□□ -1.34
SMC1A-202ENST00000375340 SLC15A2Q16348 729 aa6.67□□□□□ -1.34
SMC1A-202ENST00000375340 CELF3Q5SZQ8 465 aaKnown RBP6.67□□□□□ -1.34
SMC1A-202ENST00000375340 CCNJLQ8IV13 435 aa6.67□□□□□ -1.34
SMC1A-202ENST00000375340 C2orf69Q8N8R5 385 aa6.67□□□□□ -1.34
SMC1A-202ENST00000375340 ZC3H15Q8WU90 426 aaKnown RBP6.67□□□□□ -1.34
SMC1A-202ENST00000375340 GFM2Q969S9 779 aaKnown RBP6.67□□□□□ -1.34
SMC1A-202ENST00000375340 SEMA4BQ9NPR2 832 aaPredicted RBP6.67□□□□□ -1.34
SMC1A-202ENST00000375340 RGS18Q9NS28 235 aa6.67□□□□□ -1.34
SMC1A-202ENST00000375340 UTP6Q9NYH9 597 aaKnown RBP6.67□□□□□ -1.34
SMC1A-202ENST00000375340 TOGARAM1Q9Y4F4 1720 aa6.67□□□□□ -1.34
SMC1A-202ENST00000375340 HACD1B0YJ81 288 aa6.66□□□□□ -1.34
SMC1A-202ENST00000375340 AHCYL1O43865 530 aa6.66□□□□□ -1.34
SMC1A-202ENST00000375340 SIN3BO75182 1162 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms