RNA–Protein interactions for RNA: ENST00000372972.6

CSTF2-201, Transcript of cleavage stimulation factor subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF2, Length 1,958 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF2-201ENST00000372972 RMDN2Q96LZ7 410 aa13.74□□□□□ -0.21
CSTF2-201ENST00000372972 FAM111AQ96PZ2 611 aa13.74□□□□□ -0.21
CSTF2-201ENST00000372972 HAPLN3Q96S86 360 aa13.74□□□□□ -0.21
CSTF2-201ENST00000372972 SRPK1Q96SB4 655 aaKnown RBP13.74□□□□□ -0.21
CSTF2-201ENST00000372972 VAT1Q99536 393 aa13.74□□□□□ -0.21
CSTF2-201ENST00000372972 BRCA2P51587 3418 aa13.73□□□□□ -0.21
CSTF2-201ENST00000372972 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.73□□□□□ -0.21
CSTF2-201ENST00000372972 ZBTB24O43167 697 aaPredicted RBP13.73□□□□□ -0.21
CSTF2-201ENST00000372972 IRAK2O43187 625 aa13.73□□□□□ -0.21
CSTF2-201ENST00000372972 AP2A1O95782 977 aa13.73□□□□□ -0.21
CSTF2-201ENST00000372972 OR1G1P47890 313 aa13.73□□□□□ -0.21
CSTF2-201ENST00000372972 CCDC15Q0P6D6 951 aa13.73□□□□□ -0.21
CSTF2-201ENST00000372972 BNIP1Q12981 228 aa13.73□□□□□ -0.21
CSTF2-201ENST00000372972 SLC39A12Q504Y0 691 aa13.73□□□□□ -0.21
CSTF2-201ENST00000372972 TEX44Q53QW1 395 aa13.73□□□□□ -0.21
CSTF2-201ENST00000372972 TIFABQ6ZNK6 161 aa13.73□□□□□ -0.21
CSTF2-201ENST00000372972 DCP1BQ8IZD4 617 aaKnown RBP13.73□□□□□ -0.21
CSTF2-201ENST00000372972 CDKL2Q92772 493 aa13.73□□□□□ -0.21
CSTF2-201ENST00000372972 FTHL17Q9BXU8 183 aa13.73□□□□□ -0.21
CSTF2-201ENST00000372972 PIH1D1Q9NWS0 290 aaKnown RBP13.73□□□□□ -0.21
CSTF2-201ENST00000372972 USH1CQ9Y6N9 552 aa13.73□□□□□ -0.21
CSTF2-201ENST00000372972 COL4A4P53420 1690 aaPredicted RBP13.73□□□□□ -0.21
CSTF2-201ENST00000372972 CEP350Q5VT06 3117 aa13.73□□□□□ -0.21
CSTF2-201ENST00000372972 ERI2A8K979 691 aaKnown RBP13.72□□□□□ -0.21
CSTF2-201ENST00000372972 PQBP1O60828 265 aaKnown RBP13.72□□□□□ -0.21
CSTF2-201ENST00000372972 RASSF9O75901 435 aa13.72□□□□□ -0.21
CSTF2-201ENST00000372972 POLBP06746 335 aa13.72□□□□□ -0.21
CSTF2-201ENST00000372972 OR4Q2P0C623 313 aa13.72□□□□□ -0.21
CSTF2-201ENST00000372972 SRGAP2BP0DMP2 458 aa13.72□□□□□ -0.21
CSTF2-201ENST00000372972 ALDH3A1P30838 453 aa13.72□□□□□ -0.21
CSTF2-201ENST00000372972 CCNFP41002 786 aa13.72□□□□□ -0.21
CSTF2-201ENST00000372972 COG7P83436 770 aa13.72□□□□□ -0.21
CSTF2-201ENST00000372972 ZNF33AQ06730 810 aa13.72□□□□□ -0.21
CSTF2-201ENST00000372972 BMPR2Q13873 1038 aa13.72□□□□□ -0.21
CSTF2-201ENST00000372972 FYB2Q5VWT5 728 aa13.72□□□□□ -0.21
CSTF2-201ENST00000372972 ITPRIPL1Q6GPH6 555 aa13.72□□□□□ -0.21
CSTF2-201ENST00000372972 MARK2Q7KZI7 788 aaKnown RBP13.72□□□□□ -0.21
CSTF2-201ENST00000372972 SCN4BQ8IWT1 228 aa13.72□□□□□ -0.21
CSTF2-201ENST00000372972 DBF4BQ8NFT6 615 aa13.72□□□□□ -0.21
CSTF2-201ENST00000372972 AGAP3Q96P47 875 aa13.72□□□□□ -0.21
CSTF2-201ENST00000372972 FAM193BQ96PV7 902 aaPredicted RBP13.72□□□□□ -0.21
CSTF2-201ENST00000372972 GORASP1Q9BQQ3 440 aa13.72□□□□□ -0.21
CSTF2-201ENST00000372972 SIK2Q9H0K1 926 aa13.72□□□□□ -0.21
CSTF2-201ENST00000372972 ZCWPW1Q9H0M4 648 aa13.72□□□□□ -0.21
CSTF2-201ENST00000372972 GBA3Q9H227 469 aa13.72□□□□□ -0.21
CSTF2-201ENST00000372972 SMOC2Q9H3U7 446 aa13.72□□□□□ -0.21
CSTF2-201ENST00000372972 SLC40A1Q9NP59 571 aa13.72□□□□□ -0.21
CSTF2-201ENST00000372972 TBC1D13Q9NVG8 400 aa13.72□□□□□ -0.21
CSTF2-201ENST00000372972 SYBUQ9NX95 663 aa13.72□□□□□ -0.21
CSTF2-201ENST00000372972 MKS1Q9NXB0 559 aa13.72□□□□□ -0.21
CSTF2-201ENST00000372972 PLLPQ9Y342 182 aa13.72□□□□□ -0.21
CSTF2-201ENST00000372972 HMX2A2RU54 273 aa13.72□□□□□ -0.21
CSTF2-201ENST00000372972 CCR1P32246 355 aa13.72□□□□□ -0.21
CSTF2-201ENST00000372972 HTR7P34969 479 aa13.72□□□□□ -0.21
CSTF2-201ENST00000372972 ATN1P54259 1190 aaPredicted RBP13.72□□□□□ -0.21
CSTF2-201ENST00000372972 NIPAL4Q0D2K0 466 aa13.72□□□□□ -0.21
CSTF2-201ENST00000372972 NAB1Q13506 487 aa13.72□□□□□ -0.21
CSTF2-201ENST00000372972 CRYMQ14894 314 aa13.72□□□□□ -0.21
CSTF2-201ENST00000372972 NFE2Q16621 373 aaPredicted RBP13.72□□□□□ -0.21
CSTF2-201ENST00000372972 MROH9Q5TGP6 573 aa13.72□□□□□ -0.21
CSTF2-201ENST00000372972 RWDD4Q6NW29 188 aaKnown RBP13.72□□□□□ -0.21
CSTF2-201ENST00000372972 SCD5Q86SK9 330 aa13.72□□□□□ -0.21
CSTF2-201ENST00000372972 UNC5BQ8IZJ1 945 aa13.72□□□□□ -0.21
CSTF2-201ENST00000372972 THOC1Q96FV9 657 aaKnown RBP13.72□□□□□ -0.21
CSTF2-201ENST00000372972 SLC13A1Q9BZW2 595 aa13.72□□□□□ -0.21
CSTF2-201ENST00000372972 ALG13Q9NP73 1137 aaKnown RBP13.72□□□□□ -0.21
CSTF2-201ENST00000372972 WBP1LQ9NX94 342 aa13.72□□□□□ -0.21
CSTF2-201ENST00000372972 SFMBT1Q9UHJ3 866 aa13.72□□□□□ -0.21
CSTF2-201ENST00000372972 ZNF638Q14966 1978 aaKnown RBP13.72□□□□□ -0.21
CSTF2-201ENST00000372972 ENPP3O14638 875 aa13.71□□□□□ -0.21
CSTF2-201ENST00000372972 TADA2AO75478 443 aa13.71□□□□□ -0.21
CSTF2-201ENST00000372972 NEFHP12036 1026 aa13.71□□□□□ -0.21
CSTF2-201ENST00000372972 COL6A1P12109 1028 aa13.71□□□□□ -0.21
CSTF2-201ENST00000372972 CD68P34810 354 aaPredicted RBP13.71□□□□□ -0.21
CSTF2-201ENST00000372972 SERPINB4P48594 390 aa13.71□□□□□ -0.21
CSTF2-201ENST00000372972 ZBTB17Q13105 803 aa13.71□□□□□ -0.21
CSTF2-201ENST00000372972 SETDB1Q15047 1291 aa13.71□□□□□ -0.21
CSTF2-201ENST00000372972 PLEKHG4Q58EX7 1191 aa13.71□□□□□ -0.21
CSTF2-201ENST00000372972 SPANXN3Q5MJ09 141 aa13.71□□□□□ -0.21
CSTF2-201ENST00000372972 KCTD11Q693B1 232 aa13.71□□□□□ -0.21
CSTF2-201ENST00000372972 CDHR3Q6ZTQ4 885 aa13.71□□□□□ -0.21
CSTF2-201ENST00000372972 PIAS4Q8N2W9 510 aaPredicted RBP13.71□□□□□ -0.21
CSTF2-201ENST00000372972 OR52K1Q8NGK4 314 aa13.71□□□□□ -0.21
CSTF2-201ENST00000372972 CASP10Q92851 521 aa13.71□□□□□ -0.21
CSTF2-201ENST00000372972 PTPRN2Q92932 1015 aa13.71□□□□□ -0.21
CSTF2-201ENST00000372972 FUBP3Q96I24 572 aaKnown RBP eCLIP13.71□□□□□ -0.21
CSTF2-201ENST00000372972 TEKT5Q96M29 485 aa13.71□□□□□ -0.21
CSTF2-201ENST00000372972 TMEM51Q9NW97 253 aa13.71□□□□□ -0.21
CSTF2-201ENST00000372972 ABI2Q9NYB9 513 aaPredicted RBP13.71□□□□□ -0.21
CSTF2-201ENST00000372972 BFARQ9NZS9 450 aa13.71□□□□□ -0.21
CSTF2-201ENST00000372972 CFAP73A6NFT4 308 aa13.71□□□□□ -0.22
CSTF2-201ENST00000372972 PITPNM1O00562 1244 aa13.71□□□□□ -0.22
CSTF2-201ENST00000372972 PAGE1O75459 146 aa13.71□□□□□ -0.22
CSTF2-201ENST00000372972 DCTN3O75935 186 aa13.71□□□□□ -0.22
CSTF2-201ENST00000372972 JCHAINP01591 159 aa13.71□□□□□ -0.22
CSTF2-201ENST00000372972 TROVE2P10155 538 aaKnown RBP eCLIP13.71□□□□□ -0.22
CSTF2-201ENST00000372972 CCNCP24863 283 aa13.71□□□□□ -0.22
CSTF2-201ENST00000372972 CRHR1P34998 444 aa13.71□□□□□ -0.22
CSTF2-201ENST00000372972 PGFP49763 221 aa13.71□□□□□ -0.22
CSTF2-201ENST00000372972 PPP2R5DQ14738 602 aa13.71□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms