RNA–Protein interactions for RNA: ENST00000372459.6

CTSA-203, Transcript of cathepsin A, humanhuman

TSL 1 (best) BASIC

Gene CTSA, Length 1,972 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-203ENST00000372459 CWH43Q9H720 699 aa25.64■■□□□ 1.69
CTSA-203ENST00000372459 MYO18AQ92614 2054 aaKnown RBP25.63■■□□□ 1.69
CTSA-203ENST00000372459 FAM47DPA6NHR8 397 aa25.63■■□□□ 1.69
CTSA-203ENST00000372459 PRPF4O43172 522 aaKnown RBP eCLIP25.63■■□□□ 1.692e-6■■■■□ 20.9
CTSA-203ENST00000372459 PIAS1O75925 651 aa25.63■■□□□ 1.69
CTSA-203ENST00000372459 RFC2P35250 354 aa25.63■■□□□ 1.69
CTSA-203ENST00000372459 IFNAR2P48551 515 aa25.63■■□□□ 1.69
CTSA-203ENST00000372459 MPP2Q14168 576 aa25.63■■□□□ 1.69
CTSA-203ENST00000372459 LRRC14Q15048 493 aa25.63■■□□□ 1.69
CTSA-203ENST00000372459 SLC44A1Q8WWI5 657 aa25.63■■□□□ 1.69
CTSA-203ENST00000372459 ZNF317Q96PQ6 595 aaPredicted RBP25.63■■□□□ 1.69
CTSA-203ENST00000372459 MTPAPQ9NVV4 582 aaKnown RBP eCLIP25.63■■□□□ 1.69
CTSA-203ENST00000372459 MTRRQ9UBK8 725 aa25.63■■□□□ 1.69
CTSA-203ENST00000372459 SMG5Q9UPR3 1016 aaKnown RBP25.63■■□□□ 1.69
CTSA-203ENST00000372459 E9PAM4 449 aa25.62■■□□□ 1.69
CTSA-203ENST00000372459 EFEMP2O95967 443 aa25.62■■□□□ 1.69
CTSA-203ENST00000372459 APOEP02649 317 aa25.62■■□□□ 1.69
CTSA-203ENST00000372459 INHBAP08476 426 aa25.62■■□□□ 1.69
CTSA-203ENST00000372459 TUBP50607 506 aa25.62■■□□□ 1.69
CTSA-203ENST00000372459 MLLT6P55198 1093 aaPredicted RBP25.62■■□□□ 1.69
CTSA-203ENST00000372459 EFEMP1Q12805 493 aa25.62■■□□□ 1.69
CTSA-203ENST00000372459 TEX44Q53QW1 395 aa25.62■■□□□ 1.69
CTSA-203ENST00000372459 ITPRIPL1Q6GPH6 555 aa25.62■■□□□ 1.69
CTSA-203ENST00000372459 SLC8B1Q6J4K2 584 aa25.62■■□□□ 1.69
CTSA-203ENST00000372459 UNC5AQ6ZN44 842 aa25.62■■□□□ 1.69
CTSA-203ENST00000372459 MPP5Q8N3R9 675 aa25.62■■□□□ 1.69
CTSA-203ENST00000372459 IQANK1A0A1B0GTG1 560 aa25.62■■□□□ 1.69
CTSA-203ENST00000372459 PRKCHP24723 683 aa25.62■■□□□ 1.69
CTSA-203ENST00000372459 CPLX4Q7Z7G2 160 aa25.62■■□□□ 1.69
CTSA-203ENST00000372459 MICALL1Q8N3F8 863 aa25.62■■□□□ 1.69
CTSA-203ENST00000372459 GSDMBQ8TAX9 411 aa25.62■■□□□ 1.69
CTSA-203ENST00000372459 SGSM3Q96HU1 749 aa25.62■■□□□ 1.69
CTSA-203ENST00000372459 IGSF21Q96ID5 467 aa25.62■■□□□ 1.69
CTSA-203ENST00000372459 GBA3Q9H227 469 aa25.62■■□□□ 1.69
CTSA-203ENST00000372459 WBP1LQ9NX94 342 aa25.62■■□□□ 1.69
CTSA-203ENST00000372459 PCDHA11Q9Y5I1 949 aa25.62■■□□□ 1.69
CTSA-203ENST00000372459 BACE2Q9Y5Z0 518 aa25.62■■□□□ 1.69
CTSA-203ENST00000372459 SDR42E2A6NKP2 422 aa25.61■■□□□ 1.69
CTSA-203ENST00000372459 DFFAO00273 331 aa25.61■■□□□ 1.69
CTSA-203ENST00000372459 ZBTB24O43167 697 aaPredicted RBP25.61■■□□□ 1.69
CTSA-203ENST00000372459 CLTBP09497 229 aa25.61■■□□□ 1.69
CTSA-203ENST00000372459 SLC18A1P54219 525 aa25.61■■□□□ 1.69
CTSA-203ENST00000372459 ZBTB17Q13105 803 aa25.61■■□□□ 1.69
CTSA-203ENST00000372459 PSMD5Q16401 504 aa25.61■■□□□ 1.69
CTSA-203ENST00000372459 PRPF39Q86UA1 669 aaKnown RBP25.61■■□□□ 1.69
CTSA-203ENST00000372459 TAX1BP1Q86VP1 789 aa25.61■■□□□ 1.69
CTSA-203ENST00000372459 STAMBPL1Q96FJ0 436 aa25.61■■□□□ 1.69
CTSA-203ENST00000372459 ZNF333Q96JL9 665 aa25.61■■□□□ 1.69
CTSA-203ENST00000372459 KIF9Q9HAQ2 790 aa25.61■■□□□ 1.69
CTSA-203ENST00000372459 PLAC1Q9HBJ0 212 aa25.61■■□□□ 1.69
CTSA-203ENST00000372459 NUP205Q92621 2012 aa25.6■■□□□ 1.69
CTSA-203ENST00000372459 A0A1W2PPM1 405 aa25.6■■□□□ 1.69
CTSA-203ENST00000372459 WDR27A2RRH5 827 aa25.6■■□□□ 1.69
CTSA-203ENST00000372459 DRD4P21917 467 aa25.6■■□□□ 1.69
CTSA-203ENST00000372459 CCNCP24863 283 aa25.6■■□□□ 1.69
CTSA-203ENST00000372459 GBP2P32456 591 aaPredicted RBP25.6■■□□□ 1.69
CTSA-203ENST00000372459 ARTNQ5T4W7 220 aa25.6■■□□□ 1.69
CTSA-203ENST00000372459 RASIP1Q5U651 963 aa25.6■■□□□ 1.69
CTSA-203ENST00000372459 CCNJLQ8IV13 435 aa25.6■■□□□ 1.69
CTSA-203ENST00000372459 ARHGAP12Q8IWW6 846 aa25.6■■□□□ 1.69
CTSA-203ENST00000372459 RNF168Q8IYW5 571 aaPredicted RBP25.6■■□□□ 1.69
CTSA-203ENST00000372459 ATPAF2Q8N5M1 289 aa25.6■■□□□ 1.69
CTSA-203ENST00000372459 ATP6V0D2Q8N8Y2 350 aa25.6■■□□□ 1.69
CTSA-203ENST00000372459 AGAP3Q96P47 875 aa25.6■■□□□ 1.69
CTSA-203ENST00000372459 TSGA13Q96PP4 275 aa25.6■■□□□ 1.69
CTSA-203ENST00000372459 SSU72Q9NP77 194 aaKnown RBP25.6■■□□□ 1.69
CTSA-203ENST00000372459 GREB1Q4ZG55 1949 aa25.6■■□□□ 1.69
CTSA-203ENST00000372459 ERI2A8K979 691 aaKnown RBP25.6■■□□□ 1.69
CTSA-203ENST00000372459 SPAG7O75391 227 aa25.6■■□□□ 1.69
CTSA-203ENST00000372459 C1QAP02745 245 aa25.6■■□□□ 1.69
CTSA-203ENST00000372459 LIG3P49916 1009 aa25.6■■□□□ 1.69
CTSA-203ENST00000372459 TRIP4Q15650 581 aaPredicted RBP25.6■■□□□ 1.69
CTSA-203ENST00000372459 C10orf120Q5SQS8 335 aa25.6■■□□□ 1.69
CTSA-203ENST00000372459 PIK3R6Q5UE93 754 aa25.6■■□□□ 1.69
CTSA-203ENST00000372459 KIAA1841Q6NSI8 718 aa25.6■■□□□ 1.69
CTSA-203ENST00000372459 SLC26A11Q86WA9 606 aa25.6■■□□□ 1.69
CTSA-203ENST00000372459 LRRC6Q86X45 466 aa25.6■■□□□ 1.69
CTSA-203ENST00000372459 C4orf33Q8N1A6 199 aa25.6■■□□□ 1.69
CTSA-203ENST00000372459 RTL3Q8N8U3 475 aaKnown RBP25.6■■□□□ 1.69
CTSA-203ENST00000372459 MZB1Q8WU39 189 aa25.6■■□□□ 1.69
CTSA-203ENST00000372459 DPF3Q92784 378 aa25.6■■□□□ 1.69
CTSA-203ENST00000372459 CEP295NLQ96MC4 621 aa25.6■■□□□ 1.69
CTSA-203ENST00000372459 SLC38A8A6NNN8 435 aa25.59■■□□□ 1.69
CTSA-203ENST00000372459 WASH4PA8MWX3 477 aa25.59■■□□□ 1.69
CTSA-203ENST00000372459 AP2A1O95782 977 aa25.59■■□□□ 1.69
CTSA-203ENST00000372459 CD68P34810 354 aaPredicted RBP25.59■■□□□ 1.69
CTSA-203ENST00000372459 SPOUT1Q5T280 376 aaKnown RBP25.59■■□□□ 1.69
CTSA-203ENST00000372459 CASC4Q6P4E1 433 aa25.59■■□□□ 1.69
CTSA-203ENST00000372459 C14orf80Q86SX3 495 aa25.59■■□□□ 1.69
CTSA-203ENST00000372459 CTAGE3PQ8IX95 158 aa25.59■■□□□ 1.69
CTSA-203ENST00000372459 OTUD6BQ8N6M0 293 aa25.59■■□□□ 1.69
CTSA-203ENST00000372459 GIPC2Q8TF65 315 aa25.59■■□□□ 1.69
CTSA-203ENST00000372459 CKAP2Q8WWK9 683 aa25.59■■□□□ 1.69
CTSA-203ENST00000372459 VWCEQ96DN2 955 aa25.59■■□□□ 1.69
CTSA-203ENST00000372459 TEKT5Q96M29 485 aa25.59■■□□□ 1.69
CTSA-203ENST00000372459 MLXIPLQ9NP71 852 aa25.59■■□□□ 1.69
CTSA-203ENST00000372459 MARCH2Q9P0N8 246 aa25.59■■□□□ 1.69
CTSA-203ENST00000372459 ABHD14A-ACY1A0A1B0GW23 586 aa25.58■■□□□ 1.69
CTSA-203ENST00000372459 ADAM12O43184 909 aa25.58■■□□□ 1.69
CTSA-203ENST00000372459 SUN1O94901 812 aa25.58■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms