RNA–Protein interactions for RNA: ENST00000372243.7

TMEM53-204, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 1,579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-204ENST00000372243 VCPP55072 806 aaKnown RBP16.3■□□□□ 0.2
TMEM53-204ENST00000372243 RPS24P62847 133 aaKnown RBP16.3■□□□□ 0.2
TMEM53-204ENST00000372243 CKAP4Q07065 602 aaKnown RBP16.3■□□□□ 0.2
TMEM53-204ENST00000372243 LLGL1Q15334 1064 aa16.3■□□□□ 0.2
TMEM53-204ENST00000372243 FYB2Q5VWT5 728 aa16.3■□□□□ 0.2
TMEM53-204ENST00000372243 BZW1Q7L1Q6 419 aaKnown RBP16.3■□□□□ 0.2
TMEM53-204ENST00000372243 ZNF572Q7Z3I7 529 aaPredicted RBP16.3■□□□□ 0.2
TMEM53-204ENST00000372243 YAF2Q8IY57 180 aa16.3■□□□□ 0.2
TMEM53-204ENST00000372243 CFAP52Q8N1V2 620 aa16.3■□□□□ 0.2
TMEM53-204ENST00000372243 UMODL1-AS1Q8N2C9 162 aa16.3■□□□□ 0.2
TMEM53-204ENST00000372243 DDI1Q8WTU0 396 aa16.3■□□□□ 0.2
TMEM53-204ENST00000372243 ATP2A3Q93084 1043 aa16.3■□□□□ 0.2
TMEM53-204ENST00000372243 KXD1Q9BQD3 176 aa16.3■□□□□ 0.2
TMEM53-204ENST00000372243 FRMD8P1Q9BZ68 369 aaPredicted RBP16.3■□□□□ 0.2
TMEM53-204ENST00000372243 TBC1D30Q9Y2I9 924 aa16.3■□□□□ 0.2
TMEM53-204ENST00000372243 NUMBLQ9Y6R0 609 aa16.3■□□□□ 0.2
TMEM53-204ENST00000372243 TCRBV7S2A1N4TA0A589 114 aa16.29■□□□□ 0.2
TMEM53-204ENST00000372243 TBL1XO60907 577 aa16.29■□□□□ 0.2
TMEM53-204ENST00000372243 NDST2P52849 883 aa16.29■□□□□ 0.2
TMEM53-204ENST00000372243 DYNLT1P63172 113 aa16.29■□□□□ 0.2
TMEM53-204ENST00000372243 SIX1Q15475 284 aaPredicted RBP16.29■□□□□ 0.2
TMEM53-204ENST00000372243 RHBDF2Q6PJF5 856 aa16.29■□□□□ 0.2
TMEM53-204ENST00000372243 SETD3Q86TU7 594 aaPredicted RBP16.29■□□□□ 0.2
TMEM53-204ENST00000372243 TMEM25Q86YD3 366 aa16.29■□□□□ 0.2
TMEM53-204ENST00000372243 ZNF557Q8N988 423 aaPredicted RBP16.29■□□□□ 0.2
TMEM53-204ENST00000372243 P3H4Q92791 437 aa16.29■□□□□ 0.2
TMEM53-204ENST00000372243 ASIC4Q96FT7 647 aa16.29■□□□□ 0.2
TMEM53-204ENST00000372243 TRMT61BQ9BVS5 477 aaKnown RBP16.29■□□□□ 0.2
TMEM53-204ENST00000372243 KLC2Q9H0B6 622 aa16.29■□□□□ 0.2
TMEM53-204ENST00000372243 HOMER3Q9NSC5 361 aa16.29■□□□□ 0.2
TMEM53-204ENST00000372243 IGSF9Q9P2J2 1179 aa16.29■□□□□ 0.2
TMEM53-204ENST00000372243 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.28■□□□□ 0.2
TMEM53-204ENST00000372243 PDE2AO00408 941 aaPredicted RBP16.28■□□□□ 0.2
TMEM53-204ENST00000372243 LUC7L3O95232 432 aaKnown RBP16.28■□□□□ 0.2
TMEM53-204ENST00000372243 ADH1CP00326 375 aa16.28■□□□□ 0.2
TMEM53-204ENST00000372243 HOXD9P28356 352 aaPredicted RBP16.28■□□□□ 0.2
TMEM53-204ENST00000372243 OR1E1P30953 314 aa16.28■□□□□ 0.2
TMEM53-204ENST00000372243 ZNF177Q13360 481 aaPredicted RBP16.28■□□□□ 0.2
TMEM53-204ENST00000372243 DHCR24Q15392 516 aa16.28■□□□□ 0.2
TMEM53-204ENST00000372243 AAK1Q2M2I8 961 aa16.28■□□□□ 0.2
TMEM53-204ENST00000372243 LY6G5CQ5SRR4 150 aa16.28■□□□□ 0.2
TMEM53-204ENST00000372243 C6orf118Q5T5N4 469 aa16.28■□□□□ 0.2
TMEM53-204ENST00000372243 TPGS1Q6ZTW0 290 aa16.28■□□□□ 0.2
TMEM53-204ENST00000372243 RPGRIP1Q96KN7 1286 aa16.28■□□□□ 0.2
TMEM53-204ENST00000372243 DTLQ9NZJ0 730 aa16.28■□□□□ 0.2
TMEM53-204ENST00000372243 PRUNE2Q8WUY3 3088 aa16.28■□□□□ 0.2
TMEM53-204ENST00000372243 GOLGA6L10A0A0M3HER8 536 aa16.27■□□□□ 0.2
TMEM53-204ENST00000372243 CCDC188H7C350 402 aa16.27■□□□□ 0.2
TMEM53-204ENST00000372243 KRIT1O00522 736 aa16.27■□□□□ 0.2
TMEM53-204ENST00000372243 NCAM2O15394 837 aa16.27■□□□□ 0.2
TMEM53-204ENST00000372243 HOXC11O43248 304 aaPredicted RBP16.27■□□□□ 0.2
TMEM53-204ENST00000372243 CYP17A1P05093 508 aa16.27■□□□□ 0.2
TMEM53-204ENST00000372243 SP100P23497 879 aaPredicted RBP16.27■□□□□ 0.2
TMEM53-204ENST00000372243 YBEYP58557 167 aaPredicted RBP16.27■□□□□ 0.2
TMEM53-204ENST00000372243 TFF2Q03403 129 aa16.27■□□□□ 0.2
TMEM53-204ENST00000372243 GAD2Q05329 585 aa16.27■□□□□ 0.2
TMEM53-204ENST00000372243 NOMO1Q15155 1222 aa16.27■□□□□ 0.2
TMEM53-204ENST00000372243 CCNG2Q16589 344 aa16.27■□□□□ 0.2
TMEM53-204ENST00000372243 CYP1B1Q16678 543 aa16.27■□□□□ 0.2
TMEM53-204ENST00000372243 AFMIDQ63HM1 303 aa16.27■□□□□ 0.2
TMEM53-204ENST00000372243 TRIM68Q6AZZ1 485 aa16.27■□□□□ 0.2
TMEM53-204ENST00000372243 ZNF783Q6ZMS7 281 aa16.27■□□□□ 0.2
TMEM53-204ENST00000372243 TFAP2DQ7Z6R9 452 aa16.27■□□□□ 0.2
TMEM53-204ENST00000372243 CIR1Q86X95 450 aaPredicted RBP16.27■□□□□ 0.2
TMEM53-204ENST00000372243 NPWQ8N729 165 aa16.27■□□□□ 0.2
TMEM53-204ENST00000372243 ACTL9Q8TC94 416 aa16.27■□□□□ 0.2
TMEM53-204ENST00000372243 P2RY11Q96G91 374 aa16.27■□□□□ 0.2
TMEM53-204ENST00000372243 RPP25Q9BUL9 199 aaKnown RBP16.27■□□□□ 0.2
TMEM53-204ENST00000372243 BBS2Q9BXC9 721 aa16.27■□□□□ 0.2
TMEM53-204ENST00000372243 LRRC19Q9H756 370 aa16.27■□□□□ 0.2
TMEM53-204ENST00000372243 RRAGDQ9NQL2 400 aaPredicted RBP16.27■□□□□ 0.2
TMEM53-204ENST00000372243 NDFIP2Q9NV92 336 aa16.27■□□□□ 0.2
TMEM53-204ENST00000372243 SMARCAL1Q9NZC9 954 aa16.27■□□□□ 0.2
TMEM53-204ENST00000372243 THEGQ9P2T0 379 aa16.27■□□□□ 0.2
TMEM53-204ENST00000372243 PRKAG3Q9UGI9 489 aa16.27■□□□□ 0.2
TMEM53-204ENST00000372243 MFHAS1Q9Y4C4 1052 aa16.27■□□□□ 0.2
TMEM53-204ENST00000372243 H0Y626 953 aa16.26■□□□□ 0.19
TMEM53-204ENST00000372243 MFSD11O43934 449 aa16.26■□□□□ 0.19
TMEM53-204ENST00000372243 TYRP14679 529 aa16.26■□□□□ 0.19
TMEM53-204ENST00000372243 IL9P15248 144 aa16.26■□□□□ 0.19
TMEM53-204ENST00000372243 PECAM1P16284 738 aaPredicted RBP16.26■□□□□ 0.19
TMEM53-204ENST00000372243 OXCT1P55809 520 aa16.26■□□□□ 0.19
TMEM53-204ENST00000372243 OTUD4Q01804 1114 aaKnown RBP16.26■□□□□ 0.19
TMEM53-204ENST00000372243 GBE1Q04446 702 aa16.26■□□□□ 0.19
TMEM53-204ENST00000372243 SLC10A2Q12908 348 aaPredicted RBP16.26■□□□□ 0.19
TMEM53-204ENST00000372243 NR1H3Q13133 447 aa16.26■□□□□ 0.19
TMEM53-204ENST00000372243 XRCC4Q13426 336 aa16.26■□□□□ 0.19
TMEM53-204ENST00000372243 RUNX3Q13761 415 aa16.26■□□□□ 0.19
TMEM53-204ENST00000372243 GRM2Q14416 872 aa16.26■□□□□ 0.19
TMEM53-204ENST00000372243 PARP15Q460N3 678 aa16.26■□□□□ 0.19
TMEM53-204ENST00000372243 DRICH1Q6PGQ1 229 aaPredicted RBP16.26■□□□□ 0.19
TMEM53-204ENST00000372243 NPNTQ6UXI9 565 aa16.26■□□□□ 0.19
TMEM53-204ENST00000372243 ADAT2Q7Z6V5 191 aaKnown RBP16.26■□□□□ 0.19
TMEM53-204ENST00000372243 LRRC49Q8IUZ0 686 aa16.26■□□□□ 0.19
TMEM53-204ENST00000372243 MFN1Q8IWA4 741 aa16.26■□□□□ 0.19
TMEM53-204ENST00000372243 CCDC117Q8IWD4 279 aaPredicted RBP16.26■□□□□ 0.19
TMEM53-204ENST00000372243 CPA6Q8N4T0 437 aa16.26■□□□□ 0.19
TMEM53-204ENST00000372243 CEP112Q8N8E3 955 aa16.26■□□□□ 0.19
TMEM53-204ENST00000372243 PRELID2Q8N945 189 aa16.26■□□□□ 0.19
TMEM53-204ENST00000372243 C12orf50Q8NA57 414 aaPredicted RBP16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms