RNA–Protein interactions for RNA: ENST00000369747.7

UBE3D-203, Transcript of ubiquitin protein ligase E3D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3D, Length 1,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-203ENST00000369747 ATP5DP30049 168 aa17.82■□□□□ 0.44
UBE3D-203ENST00000369747 NME3Q13232 169 aa17.82■□□□□ 0.44
UBE3D-203ENST00000369747 MSS51Q4VC12 460 aa17.82■□□□□ 0.44
UBE3D-203ENST00000369747 CCDC13Q8IYE1 715 aa17.82■□□□□ 0.44
UBE3D-203ENST00000369747 C12orf76Q8N812 135 aaPredicted RBP17.82■□□□□ 0.44
UBE3D-203ENST00000369747 DQX1Q8TE96 717 aaKnown RBP17.82■□□□□ 0.44
UBE3D-203ENST00000369747 RTP4Q96DX8 246 aa17.82■□□□□ 0.44
UBE3D-203ENST00000369747 KCTD15Q96SI1 283 aaPredicted RBP17.82■□□□□ 0.44
UBE3D-203ENST00000369747 CORO1BQ9BR76 489 aa17.82■□□□□ 0.44
UBE3D-203ENST00000369747 LRRC3Q9BY71 257 aa17.82■□□□□ 0.44
UBE3D-203ENST00000369747 PIGVQ9NUD9 493 aa17.82■□□□□ 0.44
UBE3D-203ENST00000369747 SFMBT1Q9UHJ3 866 aa17.82■□□□□ 0.44
UBE3D-203ENST00000369747 STAP1Q9ULZ2 295 aa17.82■□□□□ 0.44
UBE3D-203ENST00000369747 E7ESA3 106 aa17.82■□□□□ 0.44
UBE3D-203ENST00000369747 SMAPO00193 183 aa17.82■□□□□ 0.44
UBE3D-203ENST00000369747 EBAG9O00559 213 aa17.82■□□□□ 0.44
UBE3D-203ENST00000369747 NRG2O14511 850 aaPredicted RBP17.82■□□□□ 0.44
UBE3D-203ENST00000369747 ARL4CP56559 192 aa17.82■□□□□ 0.44
UBE3D-203ENST00000369747 HYAL1Q12794 435 aa17.82■□□□□ 0.44
UBE3D-203ENST00000369747 PRPF38BQ5VTL8 546 aaKnown RBP17.82■□□□□ 0.44
UBE3D-203ENST00000369747 GAREM2Q75VX8 874 aa17.82■□□□□ 0.44
UBE3D-203ENST00000369747 BEND5Q7L4P6 421 aa17.82■□□□□ 0.44
UBE3D-203ENST00000369747 BNIPLQ7Z465 357 aa17.82■□□□□ 0.44
UBE3D-203ENST00000369747 TAC4Q86UU9 113 aa17.82■□□□□ 0.44
UBE3D-203ENST00000369747 TMC8Q8IU68 726 aa17.82■□□□□ 0.44
UBE3D-203ENST00000369747 ELMOD1Q8N336 334 aa17.82■□□□□ 0.44
UBE3D-203ENST00000369747 ARHGAP18Q8N392 663 aa17.82■□□□□ 0.44
UBE3D-203ENST00000369747 CASP10Q92851 521 aa17.82■□□□□ 0.44
UBE3D-203ENST00000369747 WDR83Q9BRX9 315 aaKnown RBP17.82■□□□□ 0.44
UBE3D-203ENST00000369747 NSUN3Q9H649 340 aaKnown RBP17.82■□□□□ 0.44
UBE3D-203ENST00000369747 CLIC5Q9NZA1 410 aa17.82■□□□□ 0.44
UBE3D-203ENST00000369747 CCDC195A0A1B0GUA6 201 aa17.81■□□□□ 0.44
UBE3D-203ENST00000369747 BCLAF3A2AJT9 711 aaKnown RBP17.81■□□□□ 0.44
UBE3D-203ENST00000369747 LINC01565O15544 149 aa17.81■□□□□ 0.44
UBE3D-203ENST00000369747 MAP3K6O95382 1288 aa17.81■□□□□ 0.44
UBE3D-203ENST00000369747 GLP2RO95838 553 aa17.81■□□□□ 0.44
UBE3D-203ENST00000369747 F11P03951 625 aa17.81■□□□□ 0.44
UBE3D-203ENST00000369747 RDXP35241 583 aaKnown RBP17.81■□□□□ 0.44
UBE3D-203ENST00000369747 PSEN1P49768 467 aa17.81■□□□□ 0.44
UBE3D-203ENST00000369747 BASP1P80723 227 aaKnown RBP17.81■□□□□ 0.44
UBE3D-203ENST00000369747 ADGRE1Q14246 886 aa17.81■□□□□ 0.44
UBE3D-203ENST00000369747 RTL10Q7L3V2 364 aa17.81■□□□□ 0.44
UBE3D-203ENST00000369747 ANKMY2Q8IV38 441 aa17.81■□□□□ 0.44
UBE3D-203ENST00000369747 TRIM62Q9BVG3 475 aa17.81■□□□□ 0.44
UBE3D-203ENST00000369747 DDIT4Q9NX09 232 aa17.81■□□□□ 0.44
UBE3D-203ENST00000369747 TRPM5Q9NZQ8 1165 aa17.81■□□□□ 0.44
UBE3D-203ENST00000369747 TBK1Q9UHD2 729 aa17.81■□□□□ 0.44
UBE3D-203ENST00000369747 XPO7Q9UIA9 1087 aaKnown RBP17.81■□□□□ 0.44
UBE3D-203ENST00000369747 CLUHO75153 1309 aa17.81■□□□□ 0.44
UBE3D-203ENST00000369747 ANAPC1Q9H1A4 1944 aa17.81■□□□□ 0.44
UBE3D-203ENST00000369747 EXOC1LA0A1B0GW35 172 aa17.8■□□□□ 0.44
UBE3D-203ENST00000369747 C2orf78A6NCI8 922 aa17.8■□□□□ 0.44
UBE3D-203ENST00000369747 KCNN4O15554 427 aa17.8■□□□□ 0.44
UBE3D-203ENST00000369747 MSI1O43347 362 aaKnown RBP17.8■□□□□ 0.44
UBE3D-203ENST00000369747 TLR5O60602 858 aa17.8■□□□□ 0.44
UBE3D-203ENST00000369747 GABRR2P28476 465 aa17.8■□□□□ 0.44
UBE3D-203ENST00000369747 RBL1P28749 1068 aa17.8■□□□□ 0.44
UBE3D-203ENST00000369747 HOXA9P31269 272 aa17.8■□□□□ 0.44
UBE3D-203ENST00000369747 GPX6P59796 221 aa17.8■□□□□ 0.44
UBE3D-203ENST00000369747 FAM182AQ5T1J6 154 aa17.8■□□□□ 0.44
UBE3D-203ENST00000369747 SNX30Q5VWJ9 437 aa17.8■□□□□ 0.44
UBE3D-203ENST00000369747 SRLQ86TD4 932 aa17.8■□□□□ 0.44
UBE3D-203ENST00000369747 FAM131BQ86XD5 332 aa17.8■□□□□ 0.44
UBE3D-203ENST00000369747 RIBC1Q8N443 379 aaPredicted RBP17.8■□□□□ 0.44
UBE3D-203ENST00000369747 PDZD8Q8NEN9 1154 aa17.8■□□□□ 0.44
UBE3D-203ENST00000369747 RNF139Q8WU17 664 aa17.8■□□□□ 0.44
UBE3D-203ENST00000369747 OVCA2Q8WZ82 227 aa17.8■□□□□ 0.44
UBE3D-203ENST00000369747 PPP2R3CQ969Q6 453 aa17.8■□□□□ 0.44
UBE3D-203ENST00000369747 ZNF707Q96C28 371 aaPredicted RBP17.8■□□□□ 0.44
UBE3D-203ENST00000369747 CSPG4P5Q96PW8 444 aa17.8■□□□□ 0.44
UBE3D-203ENST00000369747 FAM107BQ9H098 131 aa17.8■□□□□ 0.44
UBE3D-203ENST00000369747 VPS37BQ9H9H4 285 aa17.8■□□□□ 0.44
UBE3D-203ENST00000369747 INTS9Q9NV88 658 aaKnown RBP17.8■□□□□ 0.44
UBE3D-203ENST00000369747 DNMT3BQ9UBC3 853 aaKnown RBP17.8■□□□□ 0.44
UBE3D-203ENST00000369747 UXTQ9UBK9 157 aaPredicted RBP17.8■□□□□ 0.44
UBE3D-203ENST00000369747 DPP7Q9UHL4 492 aa17.8■□□□□ 0.44
UBE3D-203ENST00000369747 FZD10Q9ULW2 581 aa17.8■□□□□ 0.44
UBE3D-203ENST00000369747 CFAP69A5D8W1 941 aa17.8■□□□□ 0.44
UBE3D-203ENST00000369747 IGLV3-25P01717 112 aa17.8■□□□□ 0.44
UBE3D-203ENST00000369747 HNRNPA1P09651 372 aaKnown RBP eCLIP17.8■□□□□ 0.44
UBE3D-203ENST00000369747 GJA1P17302 382 aa17.8■□□□□ 0.44
UBE3D-203ENST00000369747 CCR2P41597 374 aa17.8■□□□□ 0.44
UBE3D-203ENST00000369747 EFEMP1Q12805 493 aa17.8■□□□□ 0.44
UBE3D-203ENST00000369747 SLC10A2Q12908 348 aaPredicted RBP17.8■□□□□ 0.44
UBE3D-203ENST00000369747 KCNJ11Q14654 390 aa17.8■□□□□ 0.44
UBE3D-203ENST00000369747 C10orf120Q5SQS8 335 aa17.8■□□□□ 0.44
UBE3D-203ENST00000369747 TMC5Q6UXY8 1006 aa17.8■□□□□ 0.44
UBE3D-203ENST00000369747 CAPN12Q6ZSI9 719 aa17.8■□□□□ 0.44
UBE3D-203ENST00000369747 TDRPQ86YL5 185 aa17.8■□□□□ 0.44
UBE3D-203ENST00000369747 PYROXD2Q8N2H3 581 aa17.8■□□□□ 0.44
UBE3D-203ENST00000369747 MAML1Q92585 1016 aa17.8■□□□□ 0.44
UBE3D-203ENST00000369747 CDCA3Q99618 268 aaPredicted RBP17.8■□□□□ 0.44
UBE3D-203ENST00000369747 SMOC2Q9H3U7 446 aa17.8■□□□□ 0.44
UBE3D-203ENST00000369747 ZDHHC7Q9NXF8 308 aa17.8■□□□□ 0.44
UBE3D-203ENST00000369747 RRP15Q9Y3B9 282 aaKnown RBP17.8■□□□□ 0.44
UBE3D-203ENST00000369747 OBSL1O75147 1896 aa17.79■□□□□ 0.44
UBE3D-203ENST00000369747 TMEM265A0A087WTH1 108 aa17.79■□□□□ 0.44
UBE3D-203ENST00000369747 A0A1W2PRU2 124 aa17.79■□□□□ 0.44
UBE3D-203ENST00000369747 MYL4P12829 197 aa17.79■□□□□ 0.44
UBE3D-203ENST00000369747 GBE1Q04446 702 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms