RNA–Protein interactions for RNA: ENST00000368686.1

CHTOP-201, Transcript of chromatin target of PRMT1, humanhuman

TSL 2 BASIC

Gene CHTOP, Length 2,250 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-201ENST00000368686 RSBN1LQ6PCB5 846 aaPredicted RBP18.33■□□□□ 0.52
CHTOP-201ENST00000368686 KCTD6Q8NC69 237 aa18.33■□□□□ 0.52
CHTOP-201ENST00000368686 TMEM161BQ8NDZ6 487 aa18.33■□□□□ 0.52
CHTOP-201ENST00000368686 ZSCAN18Q8TBC5 510 aaPredicted RBP18.33■□□□□ 0.52
CHTOP-201ENST00000368686 MAPK15Q8TD08 544 aa18.33■□□□□ 0.52
CHTOP-201ENST00000368686 WNK4Q96J92 1243 aa18.33■□□□□ 0.52
CHTOP-201ENST00000368686 RIT2Q99578 217 aa18.33■□□□□ 0.52
CHTOP-201ENST00000368686 EBNA1BP2Q99848 306 aaKnown RBP18.33■□□□□ 0.52
CHTOP-201ENST00000368686 ARPC5LQ9BPX5 153 aa18.33■□□□□ 0.52
CHTOP-201ENST00000368686 TUBA1CQ9BQE3 449 aa18.33■□□□□ 0.52
CHTOP-201ENST00000368686 RNPEPQ9H4A4 650 aa18.33■□□□□ 0.52
CHTOP-201ENST00000368686 EHMT1Q9H9B1 1298 aa18.33■□□□□ 0.52
CHTOP-201ENST00000368686 PCDHA11Q9Y5I1 949 aa18.33■□□□□ 0.52
CHTOP-201ENST00000368686 PSME4Q14997 1843 aa18.32■□□□□ 0.52
CHTOP-201ENST00000368686 LRCH4O75427 683 aa18.32■□□□□ 0.52
CHTOP-201ENST00000368686 DGKIO75912 1065 aa18.32■□□□□ 0.52
CHTOP-201ENST00000368686 ARP10275 920 aa18.32■□□□□ 0.52
CHTOP-201ENST00000368686 CD1EP15812 388 aa18.32■□□□□ 0.52
CHTOP-201ENST00000368686 TBXAS1P24557 533 aaPredicted RBP18.32■□□□□ 0.52
CHTOP-201ENST00000368686 GNA12Q03113 381 aa18.32■□□□□ 0.52
CHTOP-201ENST00000368686 PTK2BQ14289 1009 aa18.32■□□□□ 0.52
CHTOP-201ENST00000368686 FAM47CQ5HY64 1035 aa18.32■□□□□ 0.52
CHTOP-201ENST00000368686 ANKFN1Q8N957 763 aa18.32■□□□□ 0.52
CHTOP-201ENST00000368686 MCUQ8NE86 351 aa18.32■□□□□ 0.52
CHTOP-201ENST00000368686 DUS3LQ96G46 650 aaKnown RBP18.32■□□□□ 0.52
CHTOP-201ENST00000368686 EHD1Q9H4M9 534 aa18.32■□□□□ 0.52
CHTOP-201ENST00000368686 DDX4Q9NQI0 724 aaKnown RBP18.32■□□□□ 0.52
CHTOP-201ENST00000368686 H0YIN7 160 aa18.32■□□□□ 0.52
CHTOP-201ENST00000368686 STX16-NPEPL1H3BU86 382 aa18.32■□□□□ 0.52
CHTOP-201ENST00000368686 BCL10O95999 233 aa18.32■□□□□ 0.52
CHTOP-201ENST00000368686 PRKCGP05129 697 aa18.32■□□□□ 0.52
CHTOP-201ENST00000368686 HLA-DOAP06340 250 aa18.32■□□□□ 0.52
CHTOP-201ENST00000368686 RPL10P27635 214 aaKnown RBP18.32■□□□□ 0.52
CHTOP-201ENST00000368686 MAP4P27816 1152 aaKnown RBP18.32■□□□□ 0.52
CHTOP-201ENST00000368686 TM4SF1P30408 202 aa18.32■□□□□ 0.52
CHTOP-201ENST00000368686 SLC7A1P30825 629 aa18.32■□□□□ 0.52
CHTOP-201ENST00000368686 TRIM25Q14258 630 aaKnown RBP18.32■□□□□ 0.52
CHTOP-201ENST00000368686 SLC39A4Q6P5W5 647 aa18.32■□□□□ 0.52
CHTOP-201ENST00000368686 CYS1Q717R9 158 aa18.32■□□□□ 0.52
CHTOP-201ENST00000368686 HERC6Q8IVU3 1022 aa18.32■□□□□ 0.52
CHTOP-201ENST00000368686 PACRGLQ8N7B6 248 aa18.32■□□□□ 0.52
CHTOP-201ENST00000368686 MFSD2AQ8NA29 543 aa18.32■□□□□ 0.52
CHTOP-201ENST00000368686 TMEM35BQ8NCS4 154 aa18.32■□□□□ 0.52
CHTOP-201ENST00000368686 HPS1Q92902 700 aa18.32■□□□□ 0.52
CHTOP-201ENST00000368686 ALPK1Q96QP1 1244 aa18.32■□□□□ 0.52
CHTOP-201ENST00000368686 POLR1BQ9H9Y6 1135 aa18.32■□□□□ 0.52
CHTOP-201ENST00000368686 RBMX2Q9Y388 322 aaKnown RBP18.32■□□□□ 0.52
CHTOP-201ENST00000368686 C1orf232A0A0U1RR37 186 aa18.31■□□□□ 0.52
CHTOP-201ENST00000368686 C9IYK1 514 aa18.31■□□□□ 0.52
CHTOP-201ENST00000368686 CLPXO76031 633 aa18.31■□□□□ 0.52
CHTOP-201ENST00000368686 IL1R1P14778 569 aa18.31■□□□□ 0.52
CHTOP-201ENST00000368686 ZNF182P17025 639 aaPredicted RBP18.31■□□□□ 0.52
CHTOP-201ENST00000368686 TCN1P20061 433 aaPredicted RBP18.31■□□□□ 0.52
CHTOP-201ENST00000368686 TMBIM6P55061 237 aa18.31■□□□□ 0.52
CHTOP-201ENST00000368686 NME5P56597 212 aa18.31■□□□□ 0.52
CHTOP-201ENST00000368686 CLDN10P78369 228 aa18.31■□□□□ 0.52
CHTOP-201ENST00000368686 AGAP7PQ5VUJ5 663 aa18.31■□□□□ 0.52
CHTOP-201ENST00000368686 CADM3Q8N126 398 aa18.31■□□□□ 0.52
CHTOP-201ENST00000368686 CNTD1Q8N815 330 aa18.31■□□□□ 0.52
CHTOP-201ENST00000368686 TDRD5Q8NAT2 981 aaKnown RBP18.31■□□□□ 0.52
CHTOP-201ENST00000368686 FAM84AQ96KN4 292 aa18.31■□□□□ 0.52
CHTOP-201ENST00000368686 ACO2Q99798 780 aaKnown RBP18.31■□□□□ 0.52
CHTOP-201ENST00000368686 VRTNQ9H8Y1 702 aa18.31■□□□□ 0.52
CHTOP-201ENST00000368686 RSAD1Q9HA92 442 aa18.31■□□□□ 0.52
CHTOP-201ENST00000368686 SPDYE2BA6NHP3 402 aa18.3■□□□□ 0.52
CHTOP-201ENST00000368686 H7C0C1 242 aa18.3■□□□□ 0.52
CHTOP-201ENST00000368686 APRTP07741 180 aa18.3■□□□□ 0.52
CHTOP-201ENST00000368686 SPDYE6P0CI01 402 aa18.3■□□□□ 0.52
CHTOP-201ENST00000368686 MAGEA3P43357 314 aa18.3■□□□□ 0.52
CHTOP-201ENST00000368686 ATP5OP48047 213 aa18.3■□□□□ 0.52
CHTOP-201ENST00000368686 PSMD8P48556 350 aa18.3■□□□□ 0.52
CHTOP-201ENST00000368686 SPDYE2Q495Y8 402 aa18.3■□□□□ 0.52
CHTOP-201ENST00000368686 IRAK1BP1Q5VVH5 260 aa18.3■□□□□ 0.52
CHTOP-201ENST00000368686 SLC9A4Q6AI14 798 aa18.3■□□□□ 0.52
CHTOP-201ENST00000368686 FAM117BQ6P1L5 589 aa18.3■□□□□ 0.52
CHTOP-201ENST00000368686 FAM213AQ9BRX8 229 aa18.3■□□□□ 0.52
CHTOP-201ENST00000368686 ZNF518BQ9C0D4 1074 aa18.3■□□□□ 0.52
CHTOP-201ENST00000368686 KLHL25Q9H0H3 589 aa18.3■□□□□ 0.52
CHTOP-201ENST00000368686 SDCBP2Q9H190 292 aa18.3■□□□□ 0.52
CHTOP-201ENST00000368686 MOCS1Q9NZB8 636 aa18.3■□□□□ 0.52
CHTOP-201ENST00000368686 NUB1Q9Y5A7 615 aa18.3■□□□□ 0.52
CHTOP-201ENST00000368686 TANC1Q9C0D5 1861 aa18.3■□□□□ 0.52
CHTOP-201ENST00000368686 CFBP00751 764 aa18.3■□□□□ 0.52
CHTOP-201ENST00000368686 C4BPAP04003 597 aaKnown RBP18.3■□□□□ 0.52
CHTOP-201ENST00000368686 NAT1P18440 290 aa18.3■□□□□ 0.52
CHTOP-201ENST00000368686 GARTP22102 1010 aa18.3■□□□□ 0.52
CHTOP-201ENST00000368686 TDRD10Q5VZ19 366 aaKnown RBP18.3■□□□□ 0.52
CHTOP-201ENST00000368686 ZC3H7AQ8IWR0 971 aaKnown RBP18.3■□□□□ 0.52
CHTOP-201ENST00000368686 ARFGAP1Q8N6T3 406 aa18.3■□□□□ 0.52
CHTOP-201ENST00000368686 CMASQ8NFW8 434 aaPredicted RBP18.3■□□□□ 0.52
CHTOP-201ENST00000368686 RTP4Q96DX8 246 aa18.3■□□□□ 0.52
CHTOP-201ENST00000368686 SIGLEC10Q96LC7 697 aa18.3■□□□□ 0.52
CHTOP-201ENST00000368686 GPR101Q96P66 508 aaPredicted RBP18.3■□□□□ 0.52
CHTOP-201ENST00000368686 ZNF347Q96SE7 839 aa18.3■□□□□ 0.52
CHTOP-201ENST00000368686 NAA50Q9GZZ1 169 aaKnown RBP18.3■□□□□ 0.52
CHTOP-201ENST00000368686 ZNF385DQ9H6B1 395 aa18.3■□□□□ 0.52
CHTOP-201ENST00000368686 APOBEC3GQ9HC16 384 aaKnown RBP18.3■□□□□ 0.52
CHTOP-201ENST00000368686 XPNPEP3Q9NQH7 507 aa18.3■□□□□ 0.52
CHTOP-201ENST00000368686 C20orf96Q9NUD7 363 aaPredicted RBP18.3■□□□□ 0.52
CHTOP-201ENST00000368686 BTG4Q9NY30 223 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms