RNA–Protein interactions for RNA: ENST00000366942.3

USH2A-202, Transcript of usherin, humanhuman

TSL 1 (best) BASIC

Gene USH2A, Length 6,320 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-202ENST00000366942 ANKS4BQ8N8V4 417 aa4.19□□□□□ -1.74
USH2A-202ENST00000366942 CATSPER2Q96P56 530 aa4.19□□□□□ -1.74
USH2A-202ENST00000366942 NTPCRQ9BSD7 190 aaKnown RBP4.19□□□□□ -1.74
USH2A-202ENST00000366942 ZCWPW1Q9H0M4 648 aa4.19□□□□□ -1.74
USH2A-202ENST00000366942 ZDHHC7Q9NXF8 308 aa4.19□□□□□ -1.74
USH2A-202ENST00000366942 ITGA11Q9UKX5 1188 aa4.19□□□□□ -1.74
USH2A-202ENST00000366942 SNCAIPQ9Y6H5 919 aa4.19□□□□□ -1.74
USH2A-202ENST00000366942 TMEM8BA6NDV4 472 aa4.19□□□□□ -1.74
USH2A-202ENST00000366942 SLC16A4O15374 487 aa4.19□□□□□ -1.74
USH2A-202ENST00000366942 PRICKLE3O43900 615 aaPredicted RBP4.19□□□□□ -1.74
USH2A-202ENST00000366942 TOM1L1O75674 476 aa4.19□□□□□ -1.74
USH2A-202ENST00000366942 CA3P07451 260 aa4.19□□□□□ -1.74
USH2A-202ENST00000366942 PLS3P13797 630 aa4.19□□□□□ -1.74
USH2A-202ENST00000366942 OCRLQ01968 901 aa4.19□□□□□ -1.74
USH2A-202ENST00000366942 CBX2Q14781 532 aaPredicted RBP4.19□□□□□ -1.74
USH2A-202ENST00000366942 EIF4HQ15056 248 aaKnown RBP4.19□□□□□ -1.74
USH2A-202ENST00000366942 RPS6KA1Q15418 735 aa4.19□□□□□ -1.74
USH2A-202ENST00000366942 FHL5Q5TD97 284 aa4.19□□□□□ -1.74
USH2A-202ENST00000366942 FUT10Q6P4F1 479 aa4.19□□□□□ -1.74
USH2A-202ENST00000366942 PLXDC1Q8IUK5 500 aa4.19□□□□□ -1.74
USH2A-202ENST00000366942 DENND6AQ8IWF6 608 aa4.19□□□□□ -1.74
USH2A-202ENST00000366942 ZBED8Q8IZ13 594 aa4.19□□□□□ -1.74
USH2A-202ENST00000366942 IL17REQ8NFR9 667 aa4.19□□□□□ -1.74
USH2A-202ENST00000366942 WDR36Q8NI36 951 aaKnown RBP4.19□□□□□ -1.74
USH2A-202ENST00000366942 ANKRD7Q92527 254 aa4.19□□□□□ -1.74
USH2A-202ENST00000366942 PHF12Q96QT6 1004 aa4.19□□□□□ -1.74
USH2A-202ENST00000366942 WWP1Q9H0M0 922 aa4.19□□□□□ -1.74
USH2A-202ENST00000366942 TMX1Q9H3N1 280 aa4.19□□□□□ -1.74
USH2A-202ENST00000366942 IFNKQ9P0W0 207 aa4.19□□□□□ -1.74
USH2A-202ENST00000366942 CFAP97Q9P2B7 532 aa4.19□□□□□ -1.74
USH2A-202ENST00000366942 ADAM28Q9UKQ2 775 aa4.19□□□□□ -1.74
USH2A-202ENST00000366942 EIF2AK4Q9P2K8 1649 aaKnown RBP4.19□□□□□ -1.74
USH2A-202ENST00000366942 CCDC195A0A1B0GUA6 201 aa4.18□□□□□ -1.74
USH2A-202ENST00000366942 EIF2S1P05198 315 aaKnown RBP4.18□□□□□ -1.74
USH2A-202ENST00000366942 ALDH4A1P30038 563 aa4.18□□□□□ -1.74
USH2A-202ENST00000366942 SHMT1P34896 483 aa4.18□□□□□ -1.74
USH2A-202ENST00000366942 UBASH3AP57075 661 aa4.18□□□□□ -1.74
USH2A-202ENST00000366942 EIF3IQ13347 325 aaKnown RBP4.18□□□□□ -1.74
USH2A-202ENST00000366942 SARM1Q6SZW1 724 aa4.18□□□□□ -1.74
USH2A-202ENST00000366942 TBC1D1Q86TI0 1168 aaPredicted RBP4.18□□□□□ -1.74
USH2A-202ENST00000366942 TEX9Q8N6V9 391 aa4.18□□□□□ -1.74
USH2A-202ENST00000366942 CCDC54Q8NEL0 328 aa4.18□□□□□ -1.74
USH2A-202ENST00000366942 C18orf8Q96DM3 657 aa4.18□□□□□ -1.74
USH2A-202ENST00000366942 MRPL38Q96DV4 380 aaKnown RBP4.18□□□□□ -1.74
USH2A-202ENST00000366942 ZNF514Q96K75 400 aaPredicted RBP4.18□□□□□ -1.74
USH2A-202ENST00000366942 DPH5Q9H2P9 285 aa4.18□□□□□ -1.74
USH2A-202ENST00000366942 PTGES2Q9H7Z7 377 aa4.18□□□□□ -1.74
USH2A-202ENST00000366942 RAB9BQ9NP90 201 aa4.18□□□□□ -1.74
USH2A-202ENST00000366942 KCNK9Q9NPC2 374 aa4.18□□□□□ -1.74
USH2A-202ENST00000366942 DDIT4Q9NX09 232 aa4.18□□□□□ -1.74
USH2A-202ENST00000366942 MTRRQ9UBK8 725 aa4.18□□□□□ -1.74
USH2A-202ENST00000366942 RNF14Q9UBS8 474 aa4.18□□□□□ -1.74
USH2A-202ENST00000366942 SLC12A4Q9UP95 1085 aa4.18□□□□□ -1.74
USH2A-202ENST00000366942 MTMR6Q9Y217 621 aa4.18□□□□□ -1.74
USH2A-202ENST00000366942 RP1L1Q8IWN7 2480 aaPredicted RBP4.18□□□□□ -1.74
USH2A-202ENST00000366942 CLASP2O75122 1294 aaKnown RBP4.18□□□□□ -1.74
USH2A-202ENST00000366942 FGF18O76093 207 aa4.18□□□□□ -1.74
USH2A-202ENST00000366942 ELFN1P0C7U0 828 aa4.18□□□□□ -1.74
USH2A-202ENST00000366942 TFPIP10646 304 aa4.18□□□□□ -1.74
USH2A-202ENST00000366942 TNFSF4P23510 183 aa4.18□□□□□ -1.74
USH2A-202ENST00000366942 CTSOP43234 321 aaPredicted RBP4.18□□□□□ -1.74
USH2A-202ENST00000366942 ZNF131P52739 623 aa4.18□□□□□ -1.74
USH2A-202ENST00000366942 DHX9Q08211 1270 aaKnown RBP4.18□□□□□ -1.74
USH2A-202ENST00000366942 BLMHQ13867 455 aa4.18□□□□□ -1.74
USH2A-202ENST00000366942 SLC39A12Q504Y0 691 aa4.18□□□□□ -1.74
USH2A-202ENST00000366942 FAM26DQ5JW98 314 aa4.18□□□□□ -1.74
USH2A-202ENST00000366942 HECTD2Q5U5R9 776 aa4.18□□□□□ -1.74
USH2A-202ENST00000366942 PID1Q7Z2X4 250 aa4.18□□□□□ -1.74
USH2A-202ENST00000366942 PAGE2Q7Z2X7 111 aa4.18□□□□□ -1.74
USH2A-202ENST00000366942 RALGPS2Q86X27 583 aaPredicted RBP4.18□□□□□ -1.74
USH2A-202ENST00000366942 LRRC71Q8N4P6 559 aa4.18□□□□□ -1.74
USH2A-202ENST00000366942 FAM46DQ8NEK8 389 aa4.18□□□□□ -1.74
USH2A-202ENST00000366942 STARD8Q92502 1023 aa4.18□□□□□ -1.74
USH2A-202ENST00000366942 AKT1S1Q96B36 256 aa4.18□□□□□ -1.74
USH2A-202ENST00000366942 RAB39BQ96DA2 213 aa4.18□□□□□ -1.74
USH2A-202ENST00000366942 PLA2G12BQ9BX93 195 aa4.18□□□□□ -1.74
USH2A-202ENST00000366942 ALDH8A1Q9H2A2 487 aaPredicted RBP4.18□□□□□ -1.74
USH2A-202ENST00000366942 HIPK2Q9H2X6 1198 aa4.18□□□□□ -1.74
USH2A-202ENST00000366942 TBC1D17Q9HA65 648 aa4.18□□□□□ -1.74
USH2A-202ENST00000366942 ANLNQ9NQW6 1124 aa4.18□□□□□ -1.74
USH2A-202ENST00000366942 KLK14Q9P0G3 267 aa4.18□□□□□ -1.74
USH2A-202ENST00000366942 CPSF2Q9P2I0 782 aaKnown RBP4.18□□□□□ -1.74
USH2A-202ENST00000366942 TRMT6Q9UJA5 497 aaKnown RBP4.18□□□□□ -1.74
USH2A-202ENST00000366942 RPS6KA6Q9UK32 745 aa4.18□□□□□ -1.74
USH2A-202ENST00000366942 HCN2Q9UL51 889 aa4.18□□□□□ -1.74
USH2A-202ENST00000366942 FAF1Q9UNN5 650 aaPredicted RBP4.18□□□□□ -1.74
USH2A-202ENST00000366942 ST3GAL5Q9UNP4 418 aa4.18□□□□□ -1.74
USH2A-202ENST00000366942 CIB4A0PJX0 185 aa4.18□□□□□ -1.74
USH2A-202ENST00000366942 CCDC162PA2VCL2 907 aa4.18□□□□□ -1.74
USH2A-202ENST00000366942 FAM171A2A8MVW0 826 aa4.18□□□□□ -1.74
USH2A-202ENST00000366942 CHURC1-FNTBB4DL54 471 aa4.18□□□□□ -1.74
USH2A-202ENST00000366942 B4GAT1O43505 415 aa4.18□□□□□ -1.74
USH2A-202ENST00000366942 KLRK1P26718 216 aa4.18□□□□□ -1.74
USH2A-202ENST00000366942 S100A7P31151 101 aa4.18□□□□□ -1.74
USH2A-202ENST00000366942 ADCY8P40145 1251 aa4.18□□□□□ -1.74
USH2A-202ENST00000366942 CCR4P51679 360 aa4.18□□□□□ -1.74
USH2A-202ENST00000366942 ACTR3P61158 418 aa4.18□□□□□ -1.74
USH2A-202ENST00000366942 EEF1A1P68104 462 aaKnown RBP4.18□□□□□ -1.74
USH2A-202ENST00000366942 KCNC4Q03721 635 aa4.18□□□□□ -1.74
USH2A-202ENST00000366942 EEF1A2Q05639 463 aaKnown RBP4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms