RNA–Protein interactions for RNA: ENST00000366897.5

PRKN-205, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,877 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-205ENST00000366897 B4GALT4O60513 344 aa13.92□□□□□ -0.18
PRKN-205ENST00000366897 FAM200BP0CF97 657 aa13.92□□□□□ -0.18
PRKN-205ENST00000366897 GOT1P17174 413 aa13.92□□□□□ -0.18
PRKN-205ENST00000366897 MAGEA6P43360 314 aa13.92□□□□□ -0.18
PRKN-205ENST00000366897 PDK2Q15119 407 aa13.92□□□□□ -0.18
PRKN-205ENST00000366897 CYTH1Q15438 398 aa13.92□□□□□ -0.18
PRKN-205ENST00000366897 BOLA3Q53S33 107 aa13.92□□□□□ -0.18
PRKN-205ENST00000366897 TIFABQ6ZNK6 161 aa13.92□□□□□ -0.18
PRKN-205ENST00000366897 DCLK2Q8N568 766 aa13.92□□□□□ -0.18
PRKN-205ENST00000366897 CCDC185Q8N715 623 aa13.92□□□□□ -0.18
PRKN-205ENST00000366897 COLGALT1Q8NBJ5 622 aa13.92□□□□□ -0.18
PRKN-205ENST00000366897 NDRG1Q92597 394 aaKnown RBP13.92□□□□□ -0.18
PRKN-205ENST00000366897 RCN3Q96D15 328 aa13.92□□□□□ -0.18
PRKN-205ENST00000366897 DTNBP1Q96EV8 351 aa13.92□□□□□ -0.18
PRKN-205ENST00000366897 LRGUKQ96M69 825 aa13.92□□□□□ -0.18
PRKN-205ENST00000366897 TEX13BQ9BXU2 312 aa13.92□□□□□ -0.18
PRKN-205ENST00000366897 R3HDMLQ9H3Y0 253 aa13.92□□□□□ -0.18
PRKN-205ENST00000366897 DTLQ9NZJ0 730 aa13.92□□□□□ -0.18
PRKN-205ENST00000366897 RPS6KL1Q9Y6S9 549 aa13.92□□□□□ -0.18
PRKN-205ENST00000366897 PAPSS1O43252 624 aaPredicted RBP13.91□□□□□ -0.18
PRKN-205ENST00000366897 PSMB4P28070 264 aa13.91□□□□□ -0.18
PRKN-205ENST00000366897 RPL5P46777 297 aaKnown RBP13.91□□□□□ -0.18
PRKN-205ENST00000366897 NRF1Q16656 503 aa13.91□□□□□ -0.18
PRKN-205ENST00000366897 FKBP1CQ5VVH2 108 aa13.91□□□□□ -0.18
PRKN-205ENST00000366897 TTC30AQ86WT1 665 aa13.91□□□□□ -0.18
PRKN-205ENST00000366897 BHLHE22Q8NFJ8 381 aaPredicted RBP13.91□□□□□ -0.18
PRKN-205ENST00000366897 ABTB1Q969K4 478 aaPredicted RBP13.91□□□□□ -0.18
PRKN-205ENST00000366897 CATSPER2Q96P56 530 aa13.91□□□□□ -0.18
PRKN-205ENST00000366897 KCNK16Q96T55 309 aa13.91□□□□□ -0.18
PRKN-205ENST00000366897 CXCL16Q9H2A7 254 aa13.91□□□□□ -0.18
PRKN-205ENST00000366897 GBA2Q9HCG7 927 aaPredicted RBP13.91□□□□□ -0.18
PRKN-205ENST00000366897 PSMD13Q9UNM6 376 aa13.91□□□□□ -0.18
PRKN-205ENST00000366897 JUNP05412 331 aaKnown RBP13.91□□□□□ -0.18
PRKN-205ENST00000366897 STAG3L1P0CL83 205 aa13.91□□□□□ -0.18
PRKN-205ENST00000366897 ARSAP15289 507 aa13.91□□□□□ -0.18
PRKN-205ENST00000366897 DPP6P42658 865 aa13.91□□□□□ -0.18
PRKN-205ENST00000366897 HSDL1Q3SXM5 330 aa13.91□□□□□ -0.18
PRKN-205ENST00000366897 NXNQ6DKJ4 435 aa13.91□□□□□ -0.18
PRKN-205ENST00000366897 OLFML1Q6UWY5 402 aa13.91□□□□□ -0.18
PRKN-205ENST00000366897 DSELQ8IZU8 1212 aa13.91□□□□□ -0.18
PRKN-205ENST00000366897 DNAJC5GQ8N7S2 189 aa13.91□□□□□ -0.18
PRKN-205ENST00000366897 C7orf31Q8N865 590 aa13.91□□□□□ -0.18
PRKN-205ENST00000366897 TDRD5Q8NAT2 981 aaKnown RBP13.91□□□□□ -0.18
PRKN-205ENST00000366897 GRIN3AQ8TCU5 1115 aa13.91□□□□□ -0.18
PRKN-205ENST00000366897 CDKL2Q92772 493 aa13.91□□□□□ -0.18
PRKN-205ENST00000366897 FCRL3Q96P31 734 aaPredicted RBP13.91□□□□□ -0.18
PRKN-205ENST00000366897 PKP2Q99959 881 aa13.91□□□□□ -0.18
PRKN-205ENST00000366897 APOL2Q9BQE5 337 aa13.91□□□□□ -0.18
PRKN-205ENST00000366897 MRPL1Q9BYD6 325 aaKnown RBP13.91□□□□□ -0.18
PRKN-205ENST00000366897 NUF2Q9BZD4 464 aa13.91□□□□□ -0.18
PRKN-205ENST00000366897 SEMA6AQ9H2E6 1030 aa13.91□□□□□ -0.18
PRKN-205ENST00000366897 TCF7L2Q9NQB0 619 aa13.91□□□□□ -0.18
PRKN-205ENST00000366897 DCDC2Q9UHG0 476 aa13.91□□□□□ -0.18
PRKN-205ENST00000366897 GNEQ9Y223 722 aaKnown RBP13.91□□□□□ -0.18
PRKN-205ENST00000366897 COL11A1P12107 1806 aaPredicted RBP13.91□□□□□ -0.18
PRKN-205ENST00000366897 H3BSA7 217 aa13.9□□□□□ -0.18
PRKN-205ENST00000366897 CASQ2O14958 399 aaPredicted RBP13.9□□□□□ -0.18
PRKN-205ENST00000366897 MAGEB3O15480 346 aa13.9□□□□□ -0.18
PRKN-205ENST00000366897 PFDN1O60925 122 aa13.9□□□□□ -0.18
PRKN-205ENST00000366897 GCATO75600 419 aa13.9□□□□□ -0.18
PRKN-205ENST00000366897 VDRP11473 427 aa13.9□□□□□ -0.18
PRKN-205ENST00000366897 FGFR3P22607 806 aa13.9□□□□□ -0.18
PRKN-205ENST00000366897 PIK3R1P27986 724 aa13.9□□□□□ -0.18
PRKN-205ENST00000366897 GLRBP48167 497 aa13.9□□□□□ -0.18
PRKN-205ENST00000366897 GRM1Q13255 1194 aa13.9□□□□□ -0.18
PRKN-205ENST00000366897 ITGA7Q13683 1181 aa13.9□□□□□ -0.18
PRKN-205ENST00000366897 CEACAM7Q14002 265 aa13.9□□□□□ -0.18
PRKN-205ENST00000366897 FAM131BQ86XD5 332 aa13.9□□□□□ -0.18
PRKN-205ENST00000366897 CCNYQ8ND76 341 aa13.9□□□□□ -0.18
PRKN-205ENST00000366897 ZC3H15Q8WU90 426 aaKnown RBP13.9□□□□□ -0.18
PRKN-205ENST00000366897 SNRNP27Q8WVK2 155 aaKnown RBP13.9□□□□□ -0.18
PRKN-205ENST00000366897 KCTD15Q96SI1 283 aaPredicted RBP13.9□□□□□ -0.18
PRKN-205ENST00000366897 CDH19Q9H159 772 aa13.9□□□□□ -0.18
PRKN-205ENST00000366897 PTPRFP10586 1907 aa13.9□□□□□ -0.18
PRKN-205ENST00000366897 PSME4Q14997 1843 aa13.9□□□□□ -0.18
PRKN-205ENST00000366897 KCNK1O00180 336 aa13.9□□□□□ -0.18
PRKN-205ENST00000366897 CSPG5O95196 566 aa13.9□□□□□ -0.18
PRKN-205ENST00000366897 TPSB2P20231 275 aa13.9□□□□□ -0.18
PRKN-205ENST00000366897 RGS2P41220 211 aa13.9□□□□□ -0.18
PRKN-205ENST00000366897 HARS2P49590 506 aaKnown RBP13.9□□□□□ -0.18
PRKN-205ENST00000366897 GALK1P51570 392 aa13.9□□□□□ -0.18
PRKN-205ENST00000366897 SURF1Q15526 300 aa13.9□□□□□ -0.18
PRKN-205ENST00000366897 TPSAB1Q15661 275 aa13.9□□□□□ -0.18
PRKN-205ENST00000366897 EPGNQ6UW88 154 aa13.9□□□□□ -0.18
PRKN-205ENST00000366897 B3GNT6Q6ZMB0 384 aa13.9□□□□□ -0.18
PRKN-205ENST00000366897 HTR3CQ8WXA8 447 aa13.9□□□□□ -0.18
PRKN-205ENST00000366897 ZNF512Q96ME7 567 aaPredicted RBP13.9□□□□□ -0.18
PRKN-205ENST00000366897 CSPG4P5Q96PW8 444 aa13.9□□□□□ -0.18
PRKN-205ENST00000366897 BTBD9Q96Q07 612 aa13.9□□□□□ -0.18
PRKN-205ENST00000366897 WRNIP1Q96S55 665 aa13.9□□□□□ -0.18
PRKN-205ENST00000366897 PTPRHQ9HD43 1115 aa13.9□□□□□ -0.18
PRKN-205ENST00000366897 HESX1Q9UBX0 185 aa13.9□□□□□ -0.18
PRKN-205ENST00000366897 AP4E1Q9UPM8 1137 aa13.9□□□□□ -0.18
PRKN-205ENST00000366897 TK2O00142 265 aa13.89□□□□□ -0.19
PRKN-205ENST00000366897 RNF103O00237 685 aa13.89□□□□□ -0.19
PRKN-205ENST00000366897 MFSD11O43934 449 aa13.89□□□□□ -0.19
PRKN-205ENST00000366897 ATP5BP06576 529 aaKnown RBP13.89□□□□□ -0.19
PRKN-205ENST00000366897 PTPN1P18031 435 aaKnown RBP13.89□□□□□ -0.19
PRKN-205ENST00000366897 GRK2P25098 689 aa13.89□□□□□ -0.19
PRKN-205ENST00000366897 ZNF280AP59817 542 aaPredicted RBP13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms