RNA–Protein interactions for RNA: ENST00000361373.8

LDB3-202, Transcript of LIM domain binding 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LDB3, Length 5,297 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-202ENST00000361373 CCNE2O96020 404 aa13.74□□□□□ -0.21
LDB3-202ENST00000361373 CYP3A5P20815 502 aa13.74□□□□□ -0.21
LDB3-202ENST00000361373 KCNMA1Q12791 1236 aa13.74□□□□□ -0.21
LDB3-202ENST00000361373 MSLNQ13421 630 aaPredicted RBP13.74□□□□□ -0.21
LDB3-202ENST00000361373 FBXL19Q6PCT2 694 aa13.74□□□□□ -0.21
LDB3-202ENST00000361373 KRCC1Q9NPI7 259 aaPredicted RBP13.74□□□□□ -0.21
LDB3-202ENST00000361373 NID2Q14112 1375 aa13.74□□□□□ -0.21
LDB3-202ENST00000361373 WDR27A2RRH5 827 aa13.74□□□□□ -0.21
LDB3-202ENST00000361373 PDZK1P1A8MUH7 402 aa13.74□□□□□ -0.21
LDB3-202ENST00000361373 PPP1R11O60927 126 aaPredicted RBP13.74□□□□□ -0.21
LDB3-202ENST00000361373 KATNA1O75449 491 aa13.74□□□□□ -0.21
LDB3-202ENST00000361373 SKIV2L2P42285 1042 aaKnown RBP13.74□□□□□ -0.21
LDB3-202ENST00000361373 PEX5P50542 639 aa13.74□□□□□ -0.21
LDB3-202ENST00000361373 MRPS5P82675 430 aaKnown RBP13.74□□□□□ -0.21
LDB3-202ENST00000361373 BTKQ06187 659 aa13.74□□□□□ -0.21
LDB3-202ENST00000361373 ARSHQ5FYA8 562 aa13.74□□□□□ -0.21
LDB3-202ENST00000361373 TRMT11Q7Z4G4 463 aaKnown RBP13.74□□□□□ -0.21
LDB3-202ENST00000361373 MYCBPAPQ8TBZ2 947 aa13.74□□□□□ -0.21
LDB3-202ENST00000361373 BAP1Q92560 729 aa13.74□□□□□ -0.21
LDB3-202ENST00000361373 APOPT1Q96IL0 206 aa13.74□□□□□ -0.21
LDB3-202ENST00000361373 DEFB118Q96PH6 123 aa13.74□□□□□ -0.21
LDB3-202ENST00000361373 TTPALQ9BTX7 342 aa13.74□□□□□ -0.21
LDB3-202ENST00000361373 CYP4F12Q9HCS2 524 aa13.74□□□□□ -0.21
LDB3-202ENST00000361373 NCF1BA6NI72 391 aaPredicted RBP13.74□□□□□ -0.21
LDB3-202ENST00000361373 NCF1CA8MVU1 366 aaPredicted RBP13.74□□□□□ -0.21
LDB3-202ENST00000361373 GNRH1P01148 92 aa13.74□□□□□ -0.21
LDB3-202ENST00000361373 NCF1P14598 390 aaPredicted RBP13.74□□□□□ -0.21
LDB3-202ENST00000361373 PBLDP30039 288 aaPredicted RBP13.74□□□□□ -0.21
LDB3-202ENST00000361373 C9orf57Q5W0N0 161 aa13.74□□□□□ -0.21
LDB3-202ENST00000361373 KYAT3Q6YP21 454 aaKnown RBP13.74□□□□□ -0.21
LDB3-202ENST00000361373 SRLQ86TD4 932 aa13.74□□□□□ -0.21
LDB3-202ENST00000361373 RIN3Q8TB24 985 aa13.74□□□□□ -0.21
LDB3-202ENST00000361373 PGM2Q96G03 612 aa13.74□□□□□ -0.21
LDB3-202ENST00000361373 FAXDC2Q96IV6 333 aa13.74□□□□□ -0.21
LDB3-202ENST00000361373 DHX33Q9H6R0 707 aaKnown RBP13.74□□□□□ -0.21
LDB3-202ENST00000361373 ETNK2Q9NVF9 386 aa13.74□□□□□ -0.21
LDB3-202ENST00000361373 SCN3BQ9NY72 215 aa13.74□□□□□ -0.21
LDB3-202ENST00000361373 TNPO3Q9Y5L0 923 aaKnown RBP13.74□□□□□ -0.21
LDB3-202ENST00000361373 MAFBQ9Y5Q3 323 aaPredicted RBP13.74□□□□□ -0.21
LDB3-202ENST00000361373 CLUHO75153 1309 aa13.74□□□□□ -0.21
LDB3-202ENST00000361373 A0A096LPK6 155 aa13.74□□□□□ -0.21
LDB3-202ENST00000361373 KPNA5O15131 536 aa13.74□□□□□ -0.21
LDB3-202ENST00000361373 B4GALT5O43286 388 aa13.74□□□□□ -0.21
LDB3-202ENST00000361373 ACOX1Q15067 660 aa13.74□□□□□ -0.21
LDB3-202ENST00000361373 NEPROQ6NW34 567 aa13.74□□□□□ -0.21
LDB3-202ENST00000361373 C11orf96Q7Z7L8 435 aa13.74□□□□□ -0.21
LDB3-202ENST00000361373 FAM35AQ86V20 835 aa13.74□□□□□ -0.21
LDB3-202ENST00000361373 OR56A4Q8NGH8 313 aa13.74□□□□□ -0.21
LDB3-202ENST00000361373 SNRNP25Q9BV90 132 aaKnown RBP13.74□□□□□ -0.21
LDB3-202ENST00000361373 ARHGAP28Q9P2N2 729 aa13.74□□□□□ -0.21
LDB3-202ENST00000361373 PCYOX1Q9UHG3 505 aa13.74□□□□□ -0.21
LDB3-202ENST00000361373 A0A087X1B8 175 aa13.73□□□□□ -0.21
LDB3-202ENST00000361373 KRT87PA6NCN2 255 aa13.73□□□□□ -0.21
LDB3-202ENST00000361373 TBC1D3BA6NDS4 549 aa13.73□□□□□ -0.21
LDB3-202ENST00000361373 SEPT4O43236 478 aa13.73□□□□□ -0.21
LDB3-202ENST00000361373 TPH1P17752 444 aa13.73□□□□□ -0.21
LDB3-202ENST00000361373 CREG2Q8IUH2 290 aa13.73□□□□□ -0.21
LDB3-202ENST00000361373 STARD8Q92502 1023 aa13.73□□□□□ -0.21
LDB3-202ENST00000361373 CCDC3Q9BQI4 270 aa13.73□□□□□ -0.21
LDB3-202ENST00000361373 NLNQ9BYT8 704 aa13.73□□□□□ -0.21
LDB3-202ENST00000361373 ADNPQ9H2P0 1102 aa13.73□□□□□ -0.21
LDB3-202ENST00000361373 RIPK3Q9Y572 518 aa13.73□□□□□ -0.21
LDB3-202ENST00000361373 ATRNL1Q5VV63 1379 aa13.73□□□□□ -0.21
LDB3-202ENST00000361373 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.73□□□□□ -0.21
LDB3-202ENST00000361373 GNG14A0A1W2PPG7 69 aa13.73□□□□□ -0.21
LDB3-202ENST00000361373 MOXD2PA6NHM9 499 aa13.73□□□□□ -0.21
LDB3-202ENST00000361373 C1QTNF3-AMACRE9PGA6 284 aa13.73□□□□□ -0.21
LDB3-202ENST00000361373 PDE2AO00408 941 aaPredicted RBP13.73□□□□□ -0.21
LDB3-202ENST00000361373 CALB2P22676 271 aa13.73□□□□□ -0.21
LDB3-202ENST00000361373 LAYNQ6UX15 382 aa13.73□□□□□ -0.21
LDB3-202ENST00000361373 CNDP1Q96KN2 507 aa13.73□□□□□ -0.21
LDB3-202ENST00000361373 PPP1R10Q96QC0 940 aaKnown RBP13.73□□□□□ -0.21
LDB3-202ENST00000361373 NRDE2Q9H7Z3 1164 aa13.73□□□□□ -0.21
LDB3-202ENST00000361373 GDF3Q9NR23 364 aa13.73□□□□□ -0.21
LDB3-202ENST00000361373 THAP1Q9NVV9 213 aa13.73□□□□□ -0.21
LDB3-202ENST00000361373 NINJ2Q9NZG7 142 aa13.73□□□□□ -0.21
LDB3-202ENST00000361373 MTA2O94776 668 aa13.73□□□□□ -0.21
LDB3-202ENST00000361373 PDHA1P08559 390 aa13.73□□□□□ -0.21
LDB3-202ENST00000361373 POU5F1Q01860 360 aaKnown RBP13.73□□□□□ -0.21
LDB3-202ENST00000361373 CHRNB3Q05901 458 aa13.73□□□□□ -0.21
LDB3-202ENST00000361373 OVGP1Q12889 678 aa13.73□□□□□ -0.21
LDB3-202ENST00000361373 SETMARQ53H47 684 aaPredicted RBP13.73□□□□□ -0.21
LDB3-202ENST00000361373 DTX3LQ8TDB6 740 aa13.73□□□□□ -0.21
LDB3-202ENST00000361373 MAML3Q96JK9 1138 aa13.73□□□□□ -0.21
LDB3-202ENST00000361373 OSBPL1AQ9BXW6 950 aa13.73□□□□□ -0.21
LDB3-202ENST00000361373 ATP13A3Q9H7F0 1226 aa13.73□□□□□ -0.21
LDB3-202ENST00000361373 IL1RL2Q9HB29 575 aa13.73□□□□□ -0.21
LDB3-202ENST00000361373 UBDO15205 165 aa13.73□□□□□ -0.21
LDB3-202ENST00000361373 CATP04040 527 aaKnown RBP13.73□□□□□ -0.21
LDB3-202ENST00000361373 SLURP2P0DP57 97 aa13.73□□□□□ -0.21
LDB3-202ENST00000361373 DGKAP23743 735 aa13.73□□□□□ -0.21
LDB3-202ENST00000361373 DRG2P55039 364 aaKnown RBP13.73□□□□□ -0.21
LDB3-202ENST00000361373 AQP5P55064 265 aa13.73□□□□□ -0.21
LDB3-202ENST00000361373 ZBTB17Q13105 803 aa13.73□□□□□ -0.21
LDB3-202ENST00000361373 C15orf59Q2T9L4 293 aaPredicted RBP13.73□□□□□ -0.21
LDB3-202ENST00000361373 ATP6AP1LQ52LC2 224 aa13.73□□□□□ -0.21
LDB3-202ENST00000361373 AP1ARQ63HQ0 302 aa13.73□□□□□ -0.21
LDB3-202ENST00000361373 MTSS1LQ765P7 747 aa13.73□□□□□ -0.21
LDB3-202ENST00000361373 STRADAQ7RTN6 431 aa13.73□□□□□ -0.21
LDB3-202ENST00000361373 P3H2Q8IVL5 708 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms