RNA–Protein interactions for RNA: ENST00000361198.9

LDB1-201, Transcript of LIM domain binding 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDB1, Length 2,285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-201ENST00000361198 PID1Q7Z2X4 250 aa23.2■■□□□ 1.3
LDB1-201ENST00000361198 TAC4Q86UU9 113 aa23.2■■□□□ 1.3
LDB1-201ENST00000361198 UNC5BQ8IZJ1 945 aa23.2■■□□□ 1.3
LDB1-201ENST00000361198 TUBB6Q9BUF5 446 aa23.2■■□□□ 1.3
LDB1-201ENST00000361198 MOCS1Q9NZB8 636 aa23.2■■□□□ 1.3
LDB1-201ENST00000361198 OR12D3Q9UGF7 316 aa23.2■■□□□ 1.3
LDB1-201ENST00000361198 PTPRDP23468 1912 aa23.2■■□□□ 1.3
LDB1-201ENST00000361198 TPBGLP0DKB5 382 aa23.19■■□□□ 1.3
LDB1-201ENST00000361198 CDHR3Q6ZTQ4 885 aa23.19■■□□□ 1.3
LDB1-201ENST00000361198 PDZD4Q76G19 769 aaPredicted RBP23.19■■□□□ 1.3
LDB1-201ENST00000361198 ARNTL2Q8WYA1 636 aa23.19■■□□□ 1.3
LDB1-201ENST00000361198 SUSD3Q96L08 255 aa23.19■■□□□ 1.3
LDB1-201ENST00000361198 IGSF9Q9P2J2 1179 aa23.19■■□□□ 1.3
LDB1-201ENST00000361198 TTC3P53804 2025 aa23.19■■□□□ 1.3
LDB1-201ENST00000361198 SDR42E2A6NKP2 422 aa23.19■■□□□ 1.3
LDB1-201ENST00000361198 KLF11O14901 512 aa23.19■■□□□ 1.3
LDB1-201ENST00000361198 B4GALT3O60512 393 aa23.19■■□□□ 1.3
LDB1-201ENST00000361198 DLDP09622 509 aaKnown RBP23.19■■□□□ 1.3
LDB1-201ENST00000361198 SKIP12755 728 aa23.19■■□□□ 1.3
LDB1-201ENST00000361198 MGAT1P26572 445 aa23.19■■□□□ 1.3
LDB1-201ENST00000361198 ACLYP53396 1101 aa23.19■■□□□ 1.3
LDB1-201ENST00000361198 LGSNQ5TDP6 509 aa23.19■■□□□ 1.3
LDB1-201ENST00000361198 DCLRE1AQ6PJP8 1040 aa23.19■■□□□ 1.3
LDB1-201ENST00000361198 UROC1Q96N76 676 aa23.19■■□□□ 1.3
LDB1-201ENST00000361198 HEY2Q9UBP5 337 aa23.19■■□□□ 1.3
LDB1-201ENST00000361198 MTO1Q9Y2Z2 717 aaKnown RBP23.19■■□□□ 1.3
LDB1-201ENST00000361198 HMX2A2RU54 273 aa23.18■■□□□ 1.3
LDB1-201ENST00000361198 RFPL1O75677 317 aa23.18■■□□□ 1.3
LDB1-201ENST00000361198 PTPN3P26045 913 aa23.18■■□□□ 1.3
LDB1-201ENST00000361198 STEAP4Q687X5 459 aa23.18■■□□□ 1.3
LDB1-201ENST00000361198 RTN4RL1Q86UN2 441 aaPredicted RBP23.18■■□□□ 1.3
LDB1-201ENST00000361198 THEM5Q8N1Q8 247 aa23.18■■□□□ 1.3
LDB1-201ENST00000361198 SMC1BQ8NDV3 1235 aa23.18■■□□□ 1.3
LDB1-201ENST00000361198 DEPDC1BQ8WUY9 529 aa23.18■■□□□ 1.3
LDB1-201ENST00000361198 SKA1Q96BD8 255 aa23.18■■□□□ 1.3
LDB1-201ENST00000361198 SRPK1Q96SB4 655 aaKnown RBP23.18■■□□□ 1.3
LDB1-201ENST00000361198 NLRC5Q86WI3 1866 aa23.18■■□□□ 1.3
LDB1-201ENST00000361198 THSD7BQ9C0I4 1608 aa23.18■■□□□ 1.3
LDB1-201ENST00000361198 A0A0G2JND7 137 aa23.17■■□□□ 1.3
LDB1-201ENST00000361198 COPEO14579 308 aa23.17■■□□□ 1.3
LDB1-201ENST00000361198 LRIG2O94898 1065 aa23.17■■□□□ 1.3
LDB1-201ENST00000361198 ARFIP2P53365 341 aa23.17■■□□□ 1.3
LDB1-201ENST00000361198 SP3Q02447 781 aa23.17■■□□□ 1.3
LDB1-201ENST00000361198 IFRD2Q12894 506 aaPredicted RBP23.17■■□□□ 1.3
LDB1-201ENST00000361198 RNF180Q86T96 592 aa23.17■■□□□ 1.3
LDB1-201ENST00000361198 DQX1Q8TE96 717 aaKnown RBP23.17■■□□□ 1.3
LDB1-201ENST00000361198 PTCD3Q96EY7 689 aaKnown RBP23.17■■□□□ 1.3
LDB1-201ENST00000361198 MIPEPQ99797 713 aa23.17■■□□□ 1.3
LDB1-201ENST00000361198 DENND2DQ9H6A0 471 aaPredicted RBP23.17■■□□□ 1.3
LDB1-201ENST00000361198 KLHL8Q9P2G9 620 aaPredicted RBP23.17■■□□□ 1.3
LDB1-201ENST00000361198 LRRC42Q9Y546 428 aa23.17■■□□□ 1.3
LDB1-201ENST00000361198 COL4A4P53420 1690 aaPredicted RBP23.17■■□□□ 1.3
LDB1-201ENST00000361198 SHROOM3Q8TF72 1996 aa23.17■■□□□ 1.3
LDB1-201ENST00000361198 CCDC22O60826 627 aa23.17■■□□□ 1.3
LDB1-201ENST00000361198 KRT38O76015 456 aa23.17■■□□□ 1.3
LDB1-201ENST00000361198 PPIDQ08752 370 aaKnown RBP23.17■■□□□ 1.3
LDB1-201ENST00000361198 OLIG2Q13516 323 aa23.17■■□□□ 1.3
LDB1-201ENST00000361198 CYS1Q717R9 158 aa23.17■■□□□ 1.3
LDB1-201ENST00000361198 ZNF280BQ86YH2 543 aa23.17■■□□□ 1.3
LDB1-201ENST00000361198 SCML4Q8N228 414 aa23.17■■□□□ 1.3
LDB1-201ENST00000361198 TTC17Q96AE7 1141 aa23.17■■□□□ 1.3
LDB1-201ENST00000361198 EPAS1Q99814 870 aa23.17■■□□□ 1.3
LDB1-201ENST00000361198 GORASP1Q9BQQ3 440 aa23.17■■□□□ 1.3
LDB1-201ENST00000361198 RAD54BQ9Y620 910 aa23.17■■□□□ 1.3
LDB1-201ENST00000361198 NCAM2O15394 837 aa23.16■■□□□ 1.3
LDB1-201ENST00000361198 ALDH1A2O94788 518 aa23.16■■□□□ 1.3
LDB1-201ENST00000361198 HAUS5O94927 633 aa23.16■■□□□ 1.3
LDB1-201ENST00000361198 CKBP12277 381 aa23.16■■□□□ 1.3
LDB1-201ENST00000361198 SERPINB4P48594 390 aa23.16■■□□□ 1.3
LDB1-201ENST00000361198 TSPY1Q01534 308 aa23.16■■□□□ 1.3
LDB1-201ENST00000361198 NAA25Q14CX7 972 aa23.16■■□□□ 1.3
LDB1-201ENST00000361198 MAPRE1Q15691 268 aaKnown RBP23.16■■□□□ 1.3
LDB1-201ENST00000361198 MROH9Q5TGP6 573 aa23.16■■□□□ 1.3
LDB1-201ENST00000361198 RNF34Q969K3 372 aa23.16■■□□□ 1.3
LDB1-201ENST00000361198 NUDCD1Q96RS6 583 aa23.16■■□□□ 1.3
LDB1-201ENST00000361198 APBB2Q92870 758 aa23.16■■□□□ 1.3
LDB1-201ENST00000361198 AGAP3Q96P47 875 aa23.16■■□□□ 1.3
LDB1-201ENST00000361198 TRPV6Q9H1D0 765 aa23.16■■□□□ 1.3
LDB1-201ENST00000361198 RGS18Q9NS28 235 aa23.16■■□□□ 1.3
LDB1-201ENST00000361198 SYBUQ9NX95 663 aa23.16■■□□□ 1.3
LDB1-201ENST00000361198 SLC17A6Q9P2U8 582 aa23.16■■□□□ 1.3
LDB1-201ENST00000361198 SQORQ9Y6N5 450 aa23.16■■□□□ 1.3
LDB1-201ENST00000361198 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP23.15■■□□□ 1.3
LDB1-201ENST00000361198 AOC2O75106 756 aa23.15■■□□□ 1.3
LDB1-201ENST00000361198 DDHD2O94830 711 aa23.15■■□□□ 1.3
LDB1-201ENST00000361198 BGNP21810 368 aa23.15■■□□□ 1.3
LDB1-201ENST00000361198 YWHAHQ04917 246 aaPredicted RBP23.15■■□□□ 1.3
LDB1-201ENST00000361198 MBTPS1Q14703 1052 aa23.15■■□□□ 1.3
LDB1-201ENST00000361198 CFAP61Q8NHU2 1237 aa23.15■■□□□ 1.3
LDB1-201ENST00000361198 HHIPL1Q96JK4 782 aa23.15■■□□□ 1.3
LDB1-201ENST00000361198 BTBD10Q9BSF8 475 aa23.15■■□□□ 1.3
LDB1-201ENST00000361198 ARL8BQ9NVJ2 186 aa23.15■■□□□ 1.3
LDB1-201ENST00000361198 DONSONQ9NYP3 566 aa23.15■■□□□ 1.3
LDB1-201ENST00000361198 INPPL1O15357 1258 aa23.15■■□□□ 1.3
LDB1-201ENST00000361198 KIF1CO43896 1103 aaKnown RBP23.15■■□□□ 1.3
LDB1-201ENST00000361198 CABYRO75952 493 aa23.15■■□□□ 1.3
LDB1-201ENST00000361198 OR4Q2P0C623 313 aa23.15■■□□□ 1.3
LDB1-201ENST00000361198 TYMPP19971 482 aa23.15■■□□□ 1.3
LDB1-201ENST00000361198 PAX3P23760 479 aa23.15■■□□□ 1.3
LDB1-201ENST00000361198 PGFP49763 221 aa23.15■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms