RNA–Protein interactions for RNA: ENST00000360299.9

RAB5B-201, Transcript of RAB5B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5B, Length 5,340 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-201ENST00000360299 RBM22Q9NW64 420 aaKnown RBP eCLIP7.2□□□□□ -1.26
RAB5B-201ENST00000360299 AKAP7Q9P0M2 348 aaPredicted RBP7.2□□□□□ -1.26
RAB5B-201ENST00000360299 SCOCQ9UIL1 159 aa7.2□□□□□ -1.26
RAB5B-201ENST00000360299 SLC39A10Q9ULF5 831 aa7.2□□□□□ -1.26
RAB5B-201ENST00000360299 EPHB6O15197 1021 aa7.2□□□□□ -1.26
RAB5B-201ENST00000360299 CNMDO75829 334 aa7.2□□□□□ -1.26
RAB5B-201ENST00000360299 LCA5LO95447 670 aa7.2□□□□□ -1.26
RAB5B-201ENST00000360299 USP17L7P0C7H9 530 aa7.2□□□□□ -1.26
RAB5B-201ENST00000360299 DNAJC3Q13217 504 aa7.2□□□□□ -1.26
RAB5B-201ENST00000360299 TAF11Q15544 211 aa7.2□□□□□ -1.26
RAB5B-201ENST00000360299 SYTL3Q4VX76 610 aa7.2□□□□□ -1.26
RAB5B-201ENST00000360299 MROH9Q5TGP6 573 aa7.2□□□□□ -1.26
RAB5B-201ENST00000360299 DENND1BQ6P3S1 775 aa7.2□□□□□ -1.26
RAB5B-201ENST00000360299 CATSPER1Q8NEC5 780 aa7.2□□□□□ -1.26
RAB5B-201ENST00000360299 OR5B17Q8NGF7 314 aa7.2□□□□□ -1.26
RAB5B-201ENST00000360299 PIK3R5Q8WYR1 880 aa7.2□□□□□ -1.26
RAB5B-201ENST00000360299 EDEM1Q92611 657 aa7.2□□□□□ -1.26
RAB5B-201ENST00000360299 PGM2Q96G03 612 aa7.2□□□□□ -1.26
RAB5B-201ENST00000360299 EIF2AQ9BY44 585 aaKnown RBP7.2□□□□□ -1.26
RAB5B-201ENST00000360299 ILKAPQ9H0C8 392 aaPredicted RBP7.2□□□□□ -1.26
RAB5B-201ENST00000360299 CYLDQ9NQC7 956 aa7.2□□□□□ -1.26
RAB5B-201ENST00000360299 CRLS1Q9UJA2 301 aa7.2□□□□□ -1.26
RAB5B-201ENST00000360299 SNED1Q8TER0 1413 aa7.19□□□□□ -1.26
RAB5B-201ENST00000360299 VPS26AO75436 327 aa7.19□□□□□ -1.26
RAB5B-201ENST00000360299 RHOBTB1O94844 696 aa7.19□□□□□ -1.26
RAB5B-201ENST00000360299 F2P00734 622 aa7.19□□□□□ -1.26
RAB5B-201ENST00000360299 ATP5BP06576 529 aaKnown RBP7.19□□□□□ -1.26
RAB5B-201ENST00000360299 CFHP08603 1231 aa7.19□□□□□ -1.26
RAB5B-201ENST00000360299 RBBP7Q16576 425 aa7.19□□□□□ -1.26
RAB5B-201ENST00000360299 HECTD3Q5T447 861 aa7.19□□□□□ -1.26
RAB5B-201ENST00000360299 EEF1DP3Q658K8 133 aa7.19□□□□□ -1.26
RAB5B-201ENST00000360299 C16orf59Q7L2K0 433 aa7.19□□□□□ -1.26
RAB5B-201ENST00000360299 FAM9CQ8IZT9 166 aa7.19□□□□□ -1.26
RAB5B-201ENST00000360299 HDDC3Q8N4P3 179 aa7.19□□□□□ -1.26
RAB5B-201ENST00000360299 FNIP1Q8TF40 1166 aa7.19□□□□□ -1.26
RAB5B-201ENST00000360299 LENG9Q96B70 501 aa7.19□□□□□ -1.26
RAB5B-201ENST00000360299 SPDL1Q96EA4 605 aa7.19□□□□□ -1.26
RAB5B-201ENST00000360299 ZNF670Q9BS34 389 aa7.19□□□□□ -1.26
RAB5B-201ENST00000360299 GTPBP2Q9BX10 602 aaKnown RBP7.19□□□□□ -1.26
RAB5B-201ENST00000360299 ULBP1Q9BZM6 244 aa7.19□□□□□ -1.26
RAB5B-201ENST00000360299 SRCAPQ6ZRS2 3230 aa7.19□□□□□ -1.26
RAB5B-201ENST00000360299 OR6C75A6NL08 312 aa7.19□□□□□ -1.26
RAB5B-201ENST00000360299 FSCN2O14926 492 aa7.19□□□□□ -1.26
RAB5B-201ENST00000360299 STMN1P16949 149 aa7.19□□□□□ -1.26
RAB5B-201ENST00000360299 PLA2G4AP47712 749 aa7.19□□□□□ -1.26
RAB5B-201ENST00000360299 MPP3Q13368 585 aa7.19□□□□□ -1.26
RAB5B-201ENST00000360299 TCEA2Q15560 299 aa7.19□□□□□ -1.26
RAB5B-201ENST00000360299 PARP6Q2NL67 630 aa7.19□□□□□ -1.26
RAB5B-201ENST00000360299 KBTBD12Q3ZCT8 623 aa7.19□□□□□ -1.26
RAB5B-201ENST00000360299 PTCRAQ6ISU1 281 aaPredicted RBP7.19□□□□□ -1.26
RAB5B-201ENST00000360299 BBS12Q6ZW61 710 aa7.19□□□□□ -1.26
RAB5B-201ENST00000360299 Q7L0L9 218 aa7.19□□□□□ -1.26
RAB5B-201ENST00000360299 TMC3Q7Z5M5 1100 aa7.19□□□□□ -1.26
RAB5B-201ENST00000360299 ZCCHC9Q8N567 271 aaKnown RBP7.19□□□□□ -1.26
RAB5B-201ENST00000360299 ATAD1Q8NBU5 361 aa7.19□□□□□ -1.26
RAB5B-201ENST00000360299 CDC26Q8NHZ8 85 aa7.19□□□□□ -1.26
RAB5B-201ENST00000360299 MIPOL1Q8TD10 442 aa7.19□□□□□ -1.26
RAB5B-201ENST00000360299 RSPH1Q8WYR4 309 aa7.19□□□□□ -1.26
RAB5B-201ENST00000360299 TMA16Q96EY4 203 aaKnown RBP7.19□□□□□ -1.26
RAB5B-201ENST00000360299 PAFAH2Q99487 392 aa7.19□□□□□ -1.26
RAB5B-201ENST00000360299 BBS2Q9BXC9 721 aa7.19□□□□□ -1.26
RAB5B-201ENST00000360299 TRMT6Q9UJA5 497 aaKnown RBP7.19□□□□□ -1.26
RAB5B-201ENST00000360299 MRPL42Q9Y6G3 142 aaKnown RBP7.19□□□□□ -1.26
RAB5B-201ENST00000360299 TNRC6CQ9HCJ0 1690 aaKnown RBP7.19□□□□□ -1.26
RAB5B-201ENST00000360299 CCT8L1PA6NM43 557 aa7.19□□□□□ -1.26
RAB5B-201ENST00000360299 RIPK2O43353 540 aa7.19□□□□□ -1.26
RAB5B-201ENST00000360299 ESRRBO95718 433 aa7.19□□□□□ -1.26
RAB5B-201ENST00000360299 ITGALP20701 1170 aa7.19□□□□□ -1.26
RAB5B-201ENST00000360299 MAPK9P45984 424 aa7.19□□□□□ -1.26
RAB5B-201ENST00000360299 ITIH4Q14624 930 aa7.19□□□□□ -1.26
RAB5B-201ENST00000360299 LPIN1Q14693 890 aa7.19□□□□□ -1.26
RAB5B-201ENST00000360299 ZRANB3Q5FWF4 1079 aa7.19□□□□□ -1.26
RAB5B-201ENST00000360299 SPANXN3Q5MJ09 141 aa7.19□□□□□ -1.26
RAB5B-201ENST00000360299 SYCP2LQ5T4T6 812 aa7.19□□□□□ -1.26
RAB5B-201ENST00000360299 THEMIS2Q5TEJ8 643 aa7.19□□□□□ -1.26
RAB5B-201ENST00000360299 SCARA3Q6AZY7 606 aa7.19□□□□□ -1.26
RAB5B-201ENST00000360299 DSG4Q86SJ6 1040 aa7.19□□□□□ -1.26
RAB5B-201ENST00000360299 AENQ8WTP8 325 aaKnown RBP7.19□□□□□ -1.26
RAB5B-201ENST00000360299 NRBF2Q96F24 287 aa7.19□□□□□ -1.26
RAB5B-201ENST00000360299 TRMT61BQ9BVS5 477 aaKnown RBP7.19□□□□□ -1.26
RAB5B-201ENST00000360299 MRPL1Q9BYD6 325 aaKnown RBP7.19□□□□□ -1.26
RAB5B-201ENST00000360299 PDLIM7Q9NR12 457 aa7.19□□□□□ -1.26
RAB5B-201ENST00000360299 PKD2L2Q9NZM6 624 aa7.19□□□□□ -1.26
RAB5B-201ENST00000360299 VANGL2Q9ULK5 521 aa7.19□□□□□ -1.26
RAB5B-201ENST00000360299 SYCE1LA8MT33 242 aa7.19□□□□□ -1.26
RAB5B-201ENST00000360299 O00370 1275 aa7.19□□□□□ -1.26
RAB5B-201ENST00000360299 PITPNM1O00562 1244 aa7.19□□□□□ -1.26
RAB5B-201ENST00000360299 ENPP3O14638 875 aa7.19□□□□□ -1.26
RAB5B-201ENST00000360299 NRP1O14786 923 aa7.19□□□□□ -1.26
RAB5B-201ENST00000360299 XPO1O14980 1071 aaKnown RBP7.19□□□□□ -1.26
RAB5B-201ENST00000360299 ANGPT2O15123 496 aa7.19□□□□□ -1.26
RAB5B-201ENST00000360299 CHADO15335 359 aa7.19□□□□□ -1.26
RAB5B-201ENST00000360299 TBC1D4O60343 1298 aa7.19□□□□□ -1.26
RAB5B-201ENST00000360299 C4BPAP04003 597 aaKnown RBP7.19□□□□□ -1.26
RAB5B-201ENST00000360299 CHRM3P20309 590 aa7.19□□□□□ -1.26
RAB5B-201ENST00000360299 GP5P40197 560 aa7.19□□□□□ -1.26
RAB5B-201ENST00000360299 TUBP50607 506 aa7.19□□□□□ -1.26
RAB5B-201ENST00000360299 GRAMD1BQ3KR37 738 aa7.19□□□□□ -1.26
RAB5B-201ENST00000360299 FAXCQ5TGI0 409 aa7.19□□□□□ -1.26
RAB5B-201ENST00000360299 RASIP1Q5U651 963 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms