RNA–Protein interactions for RNA: ENST00000357980.8

TPM1-205, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-205ENST00000357980 CORO1AP31146 461 aaKnown RBP17.53■□□□□ 0.4
TPM1-205ENST00000357980 SLC6A4P31645 630 aa17.53■□□□□ 0.4
TPM1-205ENST00000357980 SLC11A2P49281 568 aa17.53■□□□□ 0.4
TPM1-205ENST00000357980 ZXDBP98169 803 aa17.53■□□□□ 0.4
TPM1-205ENST00000357980 DHX9Q08211 1270 aaKnown RBP17.53■□□□□ 0.4
TPM1-205ENST00000357980 AP1B1Q10567 949 aa17.53■□□□□ 0.4
TPM1-205ENST00000357980 C5orf22Q49AR2 442 aa17.53■□□□□ 0.4
TPM1-205ENST00000357980 ALFQ53S48 1182 aa17.53■□□□□ 0.4
TPM1-205ENST00000357980 FAM182AQ5T1J6 154 aa17.53■□□□□ 0.4
TPM1-205ENST00000357980 PPP2R2DQ66LE6 453 aa17.53■□□□□ 0.4
TPM1-205ENST00000357980 ADGRD2Q7Z7M1 963 aa17.53■□□□□ 0.4
TPM1-205ENST00000357980 ARL14EPQ8N8R7 260 aaPredicted RBP17.53■□□□□ 0.4
TPM1-205ENST00000357980 CCNYQ8ND76 341 aa17.53■□□□□ 0.4
TPM1-205ENST00000357980 CCDC110Q8TBZ0 833 aa17.53■□□□□ 0.4
TPM1-205ENST00000357980 ADAMTS19Q8TE59 1207 aa17.53■□□□□ 0.4
TPM1-205ENST00000357980 CPT1BQ92523 772 aa17.53■□□□□ 0.4
TPM1-205ENST00000357980 TMEM248Q9NWD8 314 aa17.53■□□□□ 0.4
TPM1-205ENST00000357980 HCFC2Q9Y5Z7 792 aa17.53■□□□□ 0.4
TPM1-205ENST00000357980 MYO18AQ92614 2054 aaKnown RBP17.52■□□□□ 0.4
TPM1-205ENST00000357980 A0A1W2PRU2 124 aa17.52■□□□□ 0.4
TPM1-205ENST00000357980 NDC80O14777 642 aa17.52■□□□□ 0.4
TPM1-205ENST00000357980 ZNF189O75820 626 aaPredicted RBP17.52■□□□□ 0.4
TPM1-205ENST00000357980 CNTN5O94779 1100 aa17.52■□□□□ 0.4
TPM1-205ENST00000357980 HNRNPA1P09651 372 aaKnown RBP eCLIP17.52■□□□□ 0.4
TPM1-205ENST00000357980 HDCP19113 662 aa17.52■□□□□ 0.4
TPM1-205ENST00000357980 ACTN2P35609 894 aa17.52■□□□□ 0.4
TPM1-205ENST00000357980 CCR2P41597 374 aa17.52■□□□□ 0.4
TPM1-205ENST00000357980 WASHC5Q12768 1159 aa17.52■□□□□ 0.4
TPM1-205ENST00000357980 PCGF5Q86SE9 256 aa17.52■□□□□ 0.4
TPM1-205ENST00000357980 DENND1CQ8IV53 801 aa17.52■□□□□ 0.4
TPM1-205ENST00000357980 PRCCQ92733 491 aaPredicted RBP17.52■□□□□ 0.4
TPM1-205ENST00000357980 LMAN2LQ9H0V9 348 aa17.52■□□□□ 0.4
TPM1-205ENST00000357980 NOL6Q9H6R4 1146 aaKnown RBP17.52■□□□□ 0.4
TPM1-205ENST00000357980 SMPD4Q9NXE4 827 aa17.52■□□□□ 0.4
TPM1-205ENST00000357980 A0A0A0MRY4 1105 aa17.51■□□□□ 0.39
TPM1-205ENST00000357980 EPOPA6NHQ4 379 aa17.51■□□□□ 0.39
TPM1-205ENST00000357980 RNF103O00237 685 aa17.51■□□□□ 0.39
TPM1-205ENST00000357980 GREM1O60565 184 aa17.51■□□□□ 0.39
TPM1-205ENST00000357980 MYL4P12829 197 aa17.51■□□□□ 0.39
TPM1-205ENST00000357980 CHKAP35790 457 aa17.51■□□□□ 0.39
TPM1-205ENST00000357980 SLC7A9P82251 487 aa17.51■□□□□ 0.39
TPM1-205ENST00000357980 ZNF33AQ06730 810 aa17.51■□□□□ 0.39
TPM1-205ENST00000357980 UAP1Q16222 522 aaPredicted RBP17.51■□□□□ 0.39
TPM1-205ENST00000357980 ANKRD22Q5VYY1 191 aa17.51■□□□□ 0.39
TPM1-205ENST00000357980 C4orf22Q6V702 233 aa17.51■□□□□ 0.39
TPM1-205ENST00000357980 MTERF4Q7Z6M4 381 aaKnown RBP17.51■□□□□ 0.39
TPM1-205ENST00000357980 TFAP2DQ7Z6R9 452 aa17.51■□□□□ 0.39
TPM1-205ENST00000357980 HOOK3Q86VS8 718 aa17.51■□□□□ 0.39
TPM1-205ENST00000357980 PPIL6Q8IXY8 311 aa17.51■□□□□ 0.39
TPM1-205ENST00000357980 UMODL1-AS1Q8N2C9 162 aa17.51■□□□□ 0.39
TPM1-205ENST00000357980 ZCCHC9Q8N567 271 aaKnown RBP17.51■□□□□ 0.39
TPM1-205ENST00000357980 MAB21L3Q8N8X9 362 aa17.51■□□□□ 0.39
TPM1-205ENST00000357980 NAT8LQ8N9F0 302 aa17.51■□□□□ 0.39
TPM1-205ENST00000357980 GDPD5Q8WTR4 605 aa17.51■□□□□ 0.39
TPM1-205ENST00000357980 ARNTL2Q8WYA1 636 aa17.51■□□□□ 0.39
TPM1-205ENST00000357980 SPATA13Q96N96 652 aa17.51■□□□□ 0.39
TPM1-205ENST00000357980 RPRD1AQ96P16 312 aaPredicted RBP17.51■□□□□ 0.39
TPM1-205ENST00000357980 GCNAQ96QF7 691 aa17.51■□□□□ 0.39
TPM1-205ENST00000357980 ATXN3LQ9H3M9 355 aa17.51■□□□□ 0.39
TPM1-205ENST00000357980 DNMT3BQ9UBC3 853 aaKnown RBP17.51■□□□□ 0.39
TPM1-205ENST00000357980 STOML2Q9UJZ1 356 aa17.51■□□□□ 0.39
TPM1-205ENST00000357980 AGO1Q9UL18 857 aaKnown RBP17.51■□□□□ 0.39
TPM1-205ENST00000357980 F5H5T6 163 aa17.51■□□□□ 0.39
TPM1-205ENST00000357980 POU2F2P09086 479 aa17.51■□□□□ 0.39
TPM1-205ENST00000357980 IRF1P10914 325 aa17.51■□□□□ 0.39
TPM1-205ENST00000357980 GJA1P17302 382 aa17.51■□□□□ 0.39
TPM1-205ENST00000357980 PFKLP17858 780 aa17.51■□□□□ 0.39
TPM1-205ENST00000357980 SMAD3P84022 425 aaKnown RBP17.51■□□□□ 0.39
TPM1-205ENST00000357980 STXBP5Q5T5C0 1151 aa17.51■□□□□ 0.39
TPM1-205ENST00000357980 RFWD3Q6PCD5 774 aa17.51■□□□□ 0.39
TPM1-205ENST00000357980 LGI2Q8N0V4 545 aa17.51■□□□□ 0.39
TPM1-205ENST00000357980 SHKBP1Q8TBC3 707 aa17.51■□□□□ 0.39
TPM1-205ENST00000357980 TSGA13Q96PP4 275 aa17.51■□□□□ 0.39
TPM1-205ENST00000357980 FOXP3Q9BZS1 431 aa17.51■□□□□ 0.39
TPM1-205ENST00000357980 SLC39A8Q9C0K1 460 aa17.51■□□□□ 0.39
TPM1-205ENST00000357980 TSPYL1Q9H0U9 437 aa17.51■□□□□ 0.39
TPM1-205ENST00000357980 ZDHHC7Q9NXF8 308 aa17.51■□□□□ 0.39
TPM1-205ENST00000357980 DONSONQ9NYP3 566 aa17.51■□□□□ 0.39
TPM1-205ENST00000357980 CPQQ9Y646 472 aa17.51■□□□□ 0.39
TPM1-205ENST00000357980 KCNK1O00180 336 aa17.5■□□□□ 0.39
TPM1-205ENST00000357980 OPHN1O60890 802 aa17.5■□□□□ 0.39
TPM1-205ENST00000357980 MOSPD3O75425 235 aa17.5■□□□□ 0.39
TPM1-205ENST00000357980 FGF19O95750 216 aa17.5■□□□□ 0.39
TPM1-205ENST00000357980 LATS1O95835 1130 aa17.5■□□□□ 0.39
TPM1-205ENST00000357980 PTPN2P17706 415 aa17.5■□□□□ 0.39
TPM1-205ENST00000357980 BMP8BP34820 402 aa17.5■□□□□ 0.39
TPM1-205ENST00000357980 HSD17B3P37058 310 aa17.5■□□□□ 0.39
TPM1-205ENST00000357980 MAGEA6P43360 314 aa17.5■□□□□ 0.39
TPM1-205ENST00000357980 BASP1P80723 227 aaKnown RBP17.5■□□□□ 0.39
TPM1-205ENST00000357980 KCNJ11Q14654 390 aa17.5■□□□□ 0.39
TPM1-205ENST00000357980 ANKRD20A2Q5SQ80 823 aa17.5■□□□□ 0.39
TPM1-205ENST00000357980 ADGRF1Q5T601 910 aa17.5■□□□□ 0.39
TPM1-205ENST00000357980 ANKRD20A1Q5TYW2 823 aa17.5■□□□□ 0.39
TPM1-205ENST00000357980 ANKRD20A3Q5VUR7 823 aa17.5■□□□□ 0.39
TPM1-205ENST00000357980 Q6ZNB5 142 aa17.5■□□□□ 0.39
TPM1-205ENST00000357980 RBM23Q86U06 439 aaKnown RBP17.5■□□□□ 0.39
TPM1-205ENST00000357980 CIR1Q86X95 450 aaPredicted RBP17.5■□□□□ 0.39
TPM1-205ENST00000357980 TAB3Q8N5C8 712 aaPredicted RBP17.5■□□□□ 0.39
TPM1-205ENST00000357980 ZSCAN18Q8TBC5 510 aaPredicted RBP17.5■□□□□ 0.39
TPM1-205ENST00000357980 DEPDC1BQ8WUY9 529 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms