RNA–Protein interactions for RNA: ENST00000357008.6

CHD4-201, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHD4, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-201ENST00000357008 ASB7Q9H672 318 aa15.13■□□□□ 0.01
CHD4-201ENST00000357008 PIH1D1Q9NWS0 290 aaKnown RBP15.13■□□□□ 0.01
CHD4-201ENST00000357008 PABPC1P11940 636 aaKnown RBP15.12■□□□□ 0.01
CHD4-201ENST00000357008 GRK3P35626 688 aa15.12■□□□□ 0.01
CHD4-201ENST00000357008 RPL5P46777 297 aaKnown RBP15.12■□□□□ 0.01
CHD4-201ENST00000357008 PDK3Q15120 406 aa15.12■□□□□ 0.01
CHD4-201ENST00000357008 TIMM50Q3ZCQ8 353 aa15.12■□□□□ 0.01
CHD4-201ENST00000357008 ARHGAP15Q53QZ3 475 aa15.12■□□□□ 0.01
CHD4-201ENST00000357008 EPHX4Q8IUS5 362 aa15.12■□□□□ 0.01
CHD4-201ENST00000357008 TSPAN14Q8NG11 270 aa15.12■□□□□ 0.01
CHD4-201ENST00000357008 TSPOAP1O95153 1857 aa15.12■□□□□ 0.01
CHD4-201ENST00000357008 A0A087WZ62 844 aa15.12■□□□□ 0.01
CHD4-201ENST00000357008 SEC22BO75396 215 aa15.12■□□□□ 0.01
CHD4-201ENST00000357008 ZSCAN5DPP0CG00 497 aa15.12■□□□□ 0.01
CHD4-201ENST00000357008 TPP2P29144 1249 aaPredicted RBP15.12■□□□□ 0.01
CHD4-201ENST00000357008 ROR2Q01974 943 aaKnown RBP15.12■□□□□ 0.01
CHD4-201ENST00000357008 C16orf46Q6P387 395 aa15.12■□□□□ 0.01
CHD4-201ENST00000357008 CARNMT1Q8N4J0 409 aa15.12■□□□□ 0.01
CHD4-201ENST00000357008 EPS8L1Q8TE68 723 aa15.12■□□□□ 0.01
CHD4-201ENST00000357008 FDXACB1Q9BRP7 624 aaPredicted RBP15.12■□□□□ 0.01
CHD4-201ENST00000357008 ETNK2Q9NVF9 386 aa15.12■□□□□ 0.01
CHD4-201ENST00000357008 SH3BP4Q9P0V3 963 aa15.12■□□□□ 0.01
CHD4-201ENST00000357008 ASTN2O75129 1339 aaPredicted RBP15.12■□□□□ 0.01
CHD4-201ENST00000357008 E9PCH4 1651 aa15.12■□□□□ 0.01
CHD4-201ENST00000357008 VIL1P09327 827 aaKnown RBP15.12■□□□□ 0.01
CHD4-201ENST00000357008 CETPP11597 493 aa15.12■□□□□ 0.01
CHD4-201ENST00000357008 ATP6V1C1P21283 382 aa15.12■□□□□ 0.01
CHD4-201ENST00000357008 SOX10P56693 466 aa15.12■□□□□ 0.01
CHD4-201ENST00000357008 SLC6A3Q01959 620 aa15.12■□□□□ 0.01
CHD4-201ENST00000357008 TAB1Q15750 504 aa15.12■□□□□ 0.01
CHD4-201ENST00000357008 NIPA1Q7RTP0 329 aa15.12■□□□□ 0.01
CHD4-201ENST00000357008 DHDDSQ86SQ9 333 aa15.12■□□□□ 0.01
CHD4-201ENST00000357008 BRSK2Q8IWQ3 736 aa15.12■□□□□ 0.01
CHD4-201ENST00000357008 ANKRD13AQ8IZ07 590 aa15.12■□□□□ 0.01
CHD4-201ENST00000357008 ART4Q93070 314 aa15.12■□□□□ 0.01
CHD4-201ENST00000357008 TBL1YQ9BQ87 522 aa15.12■□□□□ 0.01
CHD4-201ENST00000357008 LRRC19Q9H756 370 aa15.12■□□□□ 0.01
CHD4-201ENST00000357008 TPP1O14773 563 aa15.12■□□□□ 0.01
CHD4-201ENST00000357008 GMPSP49915 693 aaPredicted RBP15.12■□□□□ 0.01
CHD4-201ENST00000357008 SLC25A3Q00325 362 aa15.12■□□□□ 0.01
CHD4-201ENST00000357008 PARP6Q2NL67 630 aa15.12■□□□□ 0.01
CHD4-201ENST00000357008 LRRC38Q5VT99 294 aa15.12■□□□□ 0.01
CHD4-201ENST00000357008 ZNF544Q6NX49 715 aa15.12■□□□□ 0.01
CHD4-201ENST00000357008 METTL7BQ6UX53 244 aa15.12■□□□□ 0.01
CHD4-201ENST00000357008 ZNF605Q86T29 641 aa15.12■□□□□ 0.01
CHD4-201ENST00000357008 ADHFE1Q8IWW8 467 aa15.12■□□□□ 0.01
CHD4-201ENST00000357008 CAPN10Q9HC96 672 aa15.12■□□□□ 0.01
CHD4-201ENST00000357008 POLE3Q9NRF9 147 aa15.12■□□□□ 0.01
CHD4-201ENST00000357008 AHSPQ9NZD4 102 aa15.12■□□□□ 0.01
CHD4-201ENST00000357008 FAM86B1E9PN63 330 aa15.12■□□□□ 0.01
CHD4-201ENST00000357008 KCNK1O00180 336 aa15.12■□□□□ 0.01
CHD4-201ENST00000357008 SNPHO15079 494 aa15.12■□□□□ 0.01
CHD4-201ENST00000357008 FAM86B2P0C5J1 330 aa15.12■□□□□ 0.01
CHD4-201ENST00000357008 MYBL2P10244 700 aa15.12■□□□□ 0.01
CHD4-201ENST00000357008 DARSP14868 501 aaKnown RBP15.12■□□□□ 0.01
CHD4-201ENST00000357008 BACE1P56817 501 aa15.12■□□□□ 0.01
CHD4-201ENST00000357008 ITGADQ13349 1161 aa15.12■□□□□ 0.01
CHD4-201ENST00000357008 TAF5Q15542 800 aa15.12■□□□□ 0.01
CHD4-201ENST00000357008 NEK10Q6ZWH5 1172 aa15.12■□□□□ 0.01
CHD4-201ENST00000357008 MILR1Q7Z6M3 343 aa15.12■□□□□ 0.01
CHD4-201ENST00000357008 F8VP50 259 aa15.11■□□□□ 0.01
CHD4-201ENST00000357008 ENTPD5O75356 428 aa15.11■□□□□ 0.01
CHD4-201ENST00000357008 MBL2P11226 248 aaPredicted RBP15.11■□□□□ 0.01
CHD4-201ENST00000357008 DMPKQ09013 629 aa15.11■□□□□ 0.01
CHD4-201ENST00000357008 NFE2Q16621 373 aaPredicted RBP15.11■□□□□ 0.01
CHD4-201ENST00000357008 ZNF57Q68EA5 555 aaPredicted RBP15.11■□□□□ 0.01
CHD4-201ENST00000357008 PCDH20Q8N6Y1 951 aaKnown RBP15.11■□□□□ 0.01
CHD4-201ENST00000357008 TRPC4Q9UBN4 977 aa15.11■□□□□ 0.01
CHD4-201ENST00000357008 SLC25A13Q9UJS0 675 aa15.11■□□□□ 0.01
CHD4-201ENST00000357008 USP32Q8NFA0 1604 aa15.11■□□□□ 0.01
CHD4-201ENST00000357008 CAMSAP1Q5T5Y3 1602 aa15.11■□□□□ 0.01
CHD4-201ENST00000357008 HMGCRP04035 888 aa15.11■□□□□ 0.01
CHD4-201ENST00000357008 CYP1A2P05177 515 aa15.11■□□□□ 0.01
CHD4-201ENST00000357008 CCDC130P13994 396 aa15.11■□□□□ 0.01
CHD4-201ENST00000357008 ZNF7P17097 686 aaPredicted RBP15.11■□□□□ 0.01
CHD4-201ENST00000357008 ZNF135P52742 658 aaPredicted RBP15.11■□□□□ 0.01
CHD4-201ENST00000357008 ADIGQ0VDE8 80 aa15.11■□□□□ 0.01
CHD4-201ENST00000357008 BFSP2Q13515 415 aa15.11■□□□□ 0.01
CHD4-201ENST00000357008 TMEM132BQ14DG7 1078 aa15.11■□□□□ 0.01
CHD4-201ENST00000357008 RGS21Q2M5E4 152 aa15.11■□□□□ 0.01
CHD4-201ENST00000357008 TTC23Q5W5X9 447 aa15.11■□□□□ 0.01
CHD4-201ENST00000357008 ARCQ7LC44 396 aa15.11■□□□□ 0.01
CHD4-201ENST00000357008 MAP4K3Q8IVH8 894 aa15.11■□□□□ 0.01
CHD4-201ENST00000357008 CDK20Q8IZL9 346 aa15.11■□□□□ 0.01
CHD4-201ENST00000357008 PRMT6Q96LA8 375 aaPredicted RBP15.11■□□□□ 0.01
CHD4-201ENST00000357008 CDHR5Q9HBB8 845 aa15.11■□□□□ 0.01
CHD4-201ENST00000357008 NCANO14594 1321 aa15.11■□□□□ 0.01
CHD4-201ENST00000357008 A0A0U1RQJ8 604 aa15.11■□□□□ 0.01
CHD4-201ENST00000357008 KRT36O76013 467 aa15.11■□□□□ 0.01
CHD4-201ENST00000357008 LRG1P02750 347 aa15.11■□□□□ 0.01
CHD4-201ENST00000357008 CLTBP09497 229 aa15.11■□□□□ 0.01
CHD4-201ENST00000357008 ANPEPP15144 967 aa15.11■□□□□ 0.01
CHD4-201ENST00000357008 RFX3P48380 749 aa15.11■□□□□ 0.01
CHD4-201ENST00000357008 ALDH7A1P49419 539 aaKnown RBP15.11■□□□□ 0.01
CHD4-201ENST00000357008 GRIK3Q13003 919 aa15.11■□□□□ 0.01
CHD4-201ENST00000357008 SWT1Q5T5J6 900 aaKnown RBP15.11■□□□□ 0.01
CHD4-201ENST00000357008 DUPD1Q68J44 220 aa15.11■□□□□ 0.01
CHD4-201ENST00000357008 C11orf88Q6PI97 169 aa15.11■□□□□ 0.01
CHD4-201ENST00000357008 SYTL1Q8IYJ3 562 aa15.11■□□□□ 0.01
CHD4-201ENST00000357008 DGCR6LQ9BY27 220 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms