RNA–Protein interactions for RNA: ENST00000354241.5

TRIM4-202, Transcript of tripartite motif containing 4, humanhuman

TSL 1 (best) BASIC

Gene TRIM4, Length 1,942 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-202ENST00000354241 STC2O76061 302 aa21.09■□□□□ 0.97
TRIM4-202ENST00000354241 SLC11A2P49281 568 aa21.09■□□□□ 0.97
TRIM4-202ENST00000354241 GPM6BQ13491 265 aa21.09■□□□□ 0.97
TRIM4-202ENST00000354241 TXNDC8Q6A555 127 aa21.09■□□□□ 0.97
TRIM4-202ENST00000354241 TFAP2DQ7Z6R9 452 aa21.09■□□□□ 0.97
TRIM4-202ENST00000354241 TMC8Q8IU68 726 aa21.09■□□□□ 0.97
TRIM4-202ENST00000354241 DENND1CQ8IV53 801 aa21.09■□□□□ 0.97
TRIM4-202ENST00000354241 KRT222Q8N1A0 295 aa21.09■□□□□ 0.97
TRIM4-202ENST00000354241 CYP2S1Q96SQ9 504 aa21.09■□□□□ 0.97
TRIM4-202ENST00000354241 RBM15Q96T37 977 aaKnown RBP eCLIP21.09■□□□□ 0.974e-6■□□□□ 8.6
TRIM4-202ENST00000354241 KLF16Q9BXK1 252 aaPredicted RBP21.09■□□□□ 0.97
TRIM4-202ENST00000354241 PABPC3Q9H361 631 aaKnown RBP21.09■□□□□ 0.97
TRIM4-202ENST00000354241 CDC42EP4Q9H3Q1 356 aaKnown RBP21.09■□□□□ 0.97
TRIM4-202ENST00000354241 SMPD4Q9NXE4 827 aa21.09■□□□□ 0.97
TRIM4-202ENST00000354241 IGLV3-10A0A075B6K4 115 aa21.08■□□□□ 0.97
TRIM4-202ENST00000354241 WASH4PA8MWX3 477 aa21.08■□□□□ 0.97
TRIM4-202ENST00000354241 KCNK1O00180 336 aa21.08■□□□□ 0.97
TRIM4-202ENST00000354241 ZNF189O75820 626 aaPredicted RBP21.08■□□□□ 0.97
TRIM4-202ENST00000354241 CNTN5O94779 1100 aa21.08■□□□□ 0.97
TRIM4-202ENST00000354241 TMEM63AO94886 807 aa21.08■□□□□ 0.97
TRIM4-202ENST00000354241 RHOQP17081 205 aa21.08■□□□□ 0.97
TRIM4-202ENST00000354241 CORO1AP31146 461 aaKnown RBP21.08■□□□□ 0.97
TRIM4-202ENST00000354241 PBX2P40425 430 aa21.08■□□□□ 0.97
TRIM4-202ENST00000354241 GAD2Q05329 585 aa21.08■□□□□ 0.97
TRIM4-202ENST00000354241 ALFQ53S48 1182 aa21.08■□□□□ 0.97
TRIM4-202ENST00000354241 HSP90B2PQ58FF3 399 aa21.08■□□□□ 0.97
TRIM4-202ENST00000354241 CEP128Q6ZU80 1094 aa21.08■□□□□ 0.97
TRIM4-202ENST00000354241 GAREM2Q75VX8 874 aa21.08■□□□□ 0.97
TRIM4-202ENST00000354241 NLRP14Q86W24 1093 aa21.08■□□□□ 0.97
TRIM4-202ENST00000354241 ARHGAP12Q8IWW6 846 aa21.08■□□□□ 0.97
TRIM4-202ENST00000354241 ARL14EPQ8N8R7 260 aaPredicted RBP21.08■□□□□ 0.97
TRIM4-202ENST00000354241 MRPS31Q92665 395 aaKnown RBP21.08■□□□□ 0.97
TRIM4-202ENST00000354241 CORO1BQ9BR76 489 aa21.08■□□□□ 0.97
TRIM4-202ENST00000354241 LRRC3Q9BY71 257 aa21.08■□□□□ 0.97
TRIM4-202ENST00000354241 SLC39A8Q9C0K1 460 aa21.08■□□□□ 0.97
TRIM4-202ENST00000354241 CERS4Q9HA82 394 aa21.08■□□□□ 0.97
TRIM4-202ENST00000354241 ETNK1Q9HBU6 452 aa21.08■□□□□ 0.97
TRIM4-202ENST00000354241 MAN1C1Q9NR34 630 aa21.08■□□□□ 0.97
TRIM4-202ENST00000354241 NYNRINQ9P2P1 1898 aaKnown RBP21.08■□□□□ 0.96
TRIM4-202ENST00000354241 CLUHO75153 1309 aa21.08■□□□□ 0.96
TRIM4-202ENST00000354241 F5H5T6 163 aa21.08■□□□□ 0.96
TRIM4-202ENST00000354241 METTL18O95568 372 aa21.08■□□□□ 0.96
TRIM4-202ENST00000354241 MYL4P12829 197 aa21.08■□□□□ 0.96
TRIM4-202ENST00000354241 ERVK-21P61565 698 aa21.08■□□□□ 0.96
TRIM4-202ENST00000354241 WASHC5Q12768 1159 aa21.08■□□□□ 0.96
TRIM4-202ENST00000354241 KCNJ11Q14654 390 aa21.08■□□□□ 0.96
TRIM4-202ENST00000354241 UBAP2Q5T6F2 1119 aaKnown RBP21.08■□□□□ 0.96
TRIM4-202ENST00000354241 COL13A1Q5TAT6 717 aaPredicted RBP21.08■□□□□ 0.96
TRIM4-202ENST00000354241 DENND2CQ68D51 928 aa21.08■□□□□ 0.96
TRIM4-202ENST00000354241 TRMT10CQ7L0Y3 403 aaKnown RBP21.08■□□□□ 0.96
TRIM4-202ENST00000354241 CCDC13Q8IYE1 715 aa21.08■□□□□ 0.96
TRIM4-202ENST00000354241 LGI2Q8N0V4 545 aa21.08■□□□□ 0.96
TRIM4-202ENST00000354241 ATPAF2Q8N5M1 289 aa21.08■□□□□ 0.96
TRIM4-202ENST00000354241 OR2W6PQ8NHA6 318 aa21.08■□□□□ 0.96
TRIM4-202ENST00000354241 GCNAQ96QF7 691 aa21.08■□□□□ 0.96
TRIM4-202ENST00000354241 SLC22A12Q96S37 553 aa21.08■□□□□ 0.96
TRIM4-202ENST00000354241 EPB41L4BQ9H329 900 aa21.08■□□□□ 0.96
TRIM4-202ENST00000354241 SAYSD1Q9NPB0 183 aa21.08■□□□□ 0.96
TRIM4-202ENST00000354241 TMEM248Q9NWD8 314 aa21.08■□□□□ 0.96
TRIM4-202ENST00000354241 MYO18AQ92614 2054 aaKnown RBP21.07■□□□□ 0.96
TRIM4-202ENST00000354241 DRGXA6NNA5 263 aa21.07■□□□□ 0.96
TRIM4-202ENST00000354241 F5H423 210 aaPredicted RBP21.07■□□□□ 0.96
TRIM4-202ENST00000354241 SMAPO00193 183 aa21.07■□□□□ 0.96
TRIM4-202ENST00000354241 CHADO15335 359 aa21.07■□□□□ 0.96
TRIM4-202ENST00000354241 CLASP2O75122 1294 aaKnown RBP21.07■□□□□ 0.96
TRIM4-202ENST00000354241 SLC6A4P31645 630 aa21.07■□□□□ 0.96
TRIM4-202ENST00000354241 CIR1Q86X95 450 aaPredicted RBP21.07■□□□□ 0.96
TRIM4-202ENST00000354241 ZNF567Q8N184 647 aa21.07■□□□□ 0.96
TRIM4-202ENST00000354241 MYEOVQ96EZ4 313 aa21.07■□□□□ 0.96
TRIM4-202ENST00000354241 ATXN3LQ9H3M9 355 aa21.07■□□□□ 0.96
TRIM4-202ENST00000354241 ASAH2Q9NR71 780 aa21.07■□□□□ 0.96
TRIM4-202ENST00000354241 KLHL8Q9P2G9 620 aaPredicted RBP21.07■□□□□ 0.96
TRIM4-202ENST00000354241 H3BQF6 201 aa21.06■□□□□ 0.96
TRIM4-202ENST00000354241 RIPK2O43353 540 aa21.06■□□□□ 0.96
TRIM4-202ENST00000354241 OPHN1O60890 802 aa21.06■□□□□ 0.96
TRIM4-202ENST00000354241 RFPL2O75678 378 aa21.06■□□□□ 0.96
TRIM4-202ENST00000354241 EPCAMP16422 314 aa21.06■□□□□ 0.96
TRIM4-202ENST00000354241 HDCP19113 662 aa21.06■□□□□ 0.96
TRIM4-202ENST00000354241 PTPN3P26045 913 aa21.06■□□□□ 0.96
TRIM4-202ENST00000354241 HIF1AQ16665 826 aa21.06■□□□□ 0.96
TRIM4-202ENST00000354241 FAM133BQ5BKY9 247 aaKnown RBP21.06■□□□□ 0.96
TRIM4-202ENST00000354241 RFWD3Q6PCD5 774 aa21.06■□□□□ 0.96
TRIM4-202ENST00000354241 ARHGAP36Q6ZRI8 547 aa21.06■□□□□ 0.96
TRIM4-202ENST00000354241 CENPUQ71F23 418 aa21.06■□□□□ 0.96
TRIM4-202ENST00000354241 WBP2Q969T9 261 aa21.06■□□□□ 0.96
TRIM4-202ENST00000354241 MYO7AQ13402 2215 aa21.06■□□□□ 0.96
TRIM4-202ENST00000354241 A0A1W2PRU2 124 aa21.06■□□□□ 0.96
TRIM4-202ENST00000354241 H3BNC9 293 aa21.06■□□□□ 0.96
TRIM4-202ENST00000354241 MTSS1O43312 755 aa21.06■□□□□ 0.96
TRIM4-202ENST00000354241 KLKB1P03952 638 aa21.06■□□□□ 0.96
TRIM4-202ENST00000354241 APRTP07741 180 aa21.06■□□□□ 0.96
TRIM4-202ENST00000354241 GJA1P17302 382 aa21.06■□□□□ 0.96
TRIM4-202ENST00000354241 CDC25CP30307 473 aa21.06■□□□□ 0.96
TRIM4-202ENST00000354241 ARL4CP56559 192 aa21.06■□□□□ 0.96
TRIM4-202ENST00000354241 SMAD3P84022 425 aaKnown RBP21.06■□□□□ 0.96
TRIM4-202ENST00000354241 SLC29A2Q14542 456 aa21.06■□□□□ 0.96
TRIM4-202ENST00000354241 LRIG3Q6UXM1 1119 aa21.06■□□□□ 0.96
TRIM4-202ENST00000354241 PID1Q7Z2X4 250 aa21.06■□□□□ 0.96
TRIM4-202ENST00000354241 MAB21L3Q8N8X9 362 aa21.06■□□□□ 0.96
TRIM4-202ENST00000354241 UHMK1Q8TAS1 419 aaKnown RBP21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms