RNA–Protein interactions for RNA: ENST00000351948.8

SMC6-201, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,173 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-201ENST00000351948 TRIM32Q13049 653 aa14□□□□□ -0.17
SMC6-201ENST00000351948 VARS2Q5ST30 1063 aaKnown RBP14□□□□□ -0.17
SMC6-201ENST00000351948 SEMA3CQ99985 751 aa14□□□□□ -0.17
SMC6-201ENST00000351948 FAM167BQ9BTA0 163 aa14□□□□□ -0.17
SMC6-201ENST00000351948 TLE6Q9H808 572 aa14□□□□□ -0.17
SMC6-201ENST00000351948 TMBIM4Q9HC24 238 aa14□□□□□ -0.17
SMC6-201ENST00000351948 TRHDEQ9UKU6 1024 aa14□□□□□ -0.17
SMC6-201ENST00000351948 CDYLQ9Y232 598 aa14□□□□□ -0.17
SMC6-201ENST00000351948 DRG1Q9Y295 367 aaKnown RBP14□□□□□ -0.17
SMC6-201ENST00000351948 USH1CQ9Y6N9 552 aa14□□□□□ -0.17
SMC6-201ENST00000351948 TCHHQ07283 1943 aa14□□□□□ -0.17
SMC6-201ENST00000351948 AVILO75366 819 aa14□□□□□ -0.17
SMC6-201ENST00000351948 SPDYE7PQ495Y7 208 aa14□□□□□ -0.17
SMC6-201ENST00000351948 MON1AQ86VX9 555 aa14□□□□□ -0.17
SMC6-201ENST00000351948 DTX3LQ8TDB6 740 aa14□□□□□ -0.17
SMC6-201ENST00000351948 ING5Q8WYH8 240 aa14□□□□□ -0.17
SMC6-201ENST00000351948 CCL5P13501 91 aa14□□□□□ -0.17
SMC6-201ENST00000351948 EPB42P16452 691 aa14□□□□□ -0.17
SMC6-201ENST00000351948 PURAQ00577 322 aaKnown RBP14□□□□□ -0.17
SMC6-201ENST00000351948 PTK2BQ14289 1009 aa14□□□□□ -0.17
SMC6-201ENST00000351948 PKN2Q16513 984 aaKnown RBP14□□□□□ -0.17
SMC6-201ENST00000351948 GALNTL6Q49A17 601 aa14□□□□□ -0.17
SMC6-201ENST00000351948 TIGD5Q53EQ6 642 aa14□□□□□ -0.17
SMC6-201ENST00000351948 INTS6LQ5JSJ4 861 aaKnown RBP14□□□□□ -0.17
SMC6-201ENST00000351948 NPAS4Q8IUM7 802 aa14□□□□□ -0.17
SMC6-201ENST00000351948 TMEM139Q8IV31 216 aa14□□□□□ -0.17
SMC6-201ENST00000351948 CSGALNACT1Q8TDX6 532 aa14□□□□□ -0.17
SMC6-201ENST00000351948 C2orf49Q9BVC5 232 aaPredicted RBP14□□□□□ -0.17
SMC6-201ENST00000351948 CAPN10Q9HC96 672 aa14□□□□□ -0.17
SMC6-201ENST00000351948 FBXL21Q9UKT6 434 aa14□□□□□ -0.17
SMC6-201ENST00000351948 FAM50BQ9Y247 325 aa14□□□□□ -0.17
SMC6-201ENST00000351948 SNX10Q9Y5X0 201 aa14□□□□□ -0.17
SMC6-201ENST00000351948 V9GYQ6 96 aa14□□□□□ -0.17
SMC6-201ENST00000351948 A0A0A0MRY4 1105 aa14□□□□□ -0.17
SMC6-201ENST00000351948 PHGDHO43175 533 aaKnown RBP14□□□□□ -0.17
SMC6-201ENST00000351948 HCRTO43612 131 aa14□□□□□ -0.17
SMC6-201ENST00000351948 ATP4AP20648 1035 aa14□□□□□ -0.17
SMC6-201ENST00000351948 ABL2P42684 1182 aa14□□□□□ -0.17
SMC6-201ENST00000351948 APLP1P51693 650 aa14□□□□□ -0.17
SMC6-201ENST00000351948 TUBGCP3Q96CW5 907 aa14□□□□□ -0.17
SMC6-201ENST00000351948 HES6Q96HZ4 224 aa14□□□□□ -0.17
SMC6-201ENST00000351948 SPATA13Q96N96 652 aa14□□□□□ -0.17
SMC6-201ENST00000351948 UNC93B1Q9H1C4 597 aa14□□□□□ -0.17
SMC6-201ENST00000351948 TCRBV7S2A1N4TA0A589 114 aa13.99□□□□□ -0.17
SMC6-201ENST00000351948 LRRC74AQ0VAA2 488 aa13.99□□□□□ -0.17
SMC6-201ENST00000351948 FAAP100Q0VG06 881 aa13.99□□□□□ -0.17
SMC6-201ENST00000351948 EML3Q32P44 896 aa13.99□□□□□ -0.17
SMC6-201ENST00000351948 ARMC12Q5T9G4 340 aa13.99□□□□□ -0.17
SMC6-201ENST00000351948 FOXR2Q6PJQ5 311 aa13.99□□□□□ -0.17
SMC6-201ENST00000351948 TRMT11Q7Z4G4 463 aaKnown RBP13.99□□□□□ -0.17
SMC6-201ENST00000351948 MYO1HQ8N1T3 1032 aa13.99□□□□□ -0.17
SMC6-201ENST00000351948 CLEC4CQ8WTT0 213 aa13.99□□□□□ -0.17
SMC6-201ENST00000351948 ZNF296Q8WUU4 475 aaPredicted RBP13.99□□□□□ -0.17
SMC6-201ENST00000351948 PAWRQ96IZ0 340 aaKnown RBP13.99□□□□□ -0.17
SMC6-201ENST00000351948 FAM129AQ9BZQ8 928 aa13.99□□□□□ -0.17
SMC6-201ENST00000351948 PHTF1Q9UMS5 762 aa13.99□□□□□ -0.17
SMC6-201ENST00000351948 R3HDM2Q9Y2K5 976 aaKnown RBP13.99□□□□□ -0.17
SMC6-201ENST00000351948 SPEF2Q9C093 1822 aa13.99□□□□□ -0.17
SMC6-201ENST00000351948 RNF103-CHMP3A0A140T963 221 aa13.99□□□□□ -0.17
SMC6-201ENST00000351948 CD151P48509 253 aa13.99□□□□□ -0.17
SMC6-201ENST00000351948 ATXN1P54253 815 aaKnown RBP13.99□□□□□ -0.17
SMC6-201ENST00000351948 ACTN3Q08043 901 aaPredicted RBP13.99□□□□□ -0.17
SMC6-201ENST00000351948 UGT3A1Q6NUS8 523 aa13.99□□□□□ -0.17
SMC6-201ENST00000351948 MARK2Q7KZI7 788 aaKnown RBP13.99□□□□□ -0.17
SMC6-201ENST00000351948 PYROXD2Q8N2H3 581 aa13.99□□□□□ -0.17
SMC6-201ENST00000351948 SPPL2BQ8TCT7 592 aa13.99□□□□□ -0.17
SMC6-201ENST00000351948 TRIB2Q92519 343 aa13.99□□□□□ -0.17
SMC6-201ENST00000351948 SUSD6Q92537 303 aa13.99□□□□□ -0.17
SMC6-201ENST00000351948 ANLNQ9NQW6 1124 aa13.99□□□□□ -0.17
SMC6-201ENST00000351948 MYH13Q9UKX3 1938 aa13.99□□□□□ -0.17
SMC6-201ENST00000351948 NUP98P52948 1817 aa13.99□□□□□ -0.17
SMC6-201ENST00000351948 PDZK1P1A8MUH7 402 aa13.99□□□□□ -0.17
SMC6-201ENST00000351948 RGS20O76081 388 aa13.99□□□□□ -0.17
SMC6-201ENST00000351948 PRPF39Q86UA1 669 aaKnown RBP13.99□□□□□ -0.17
SMC6-201ENST00000351948 ARNTL2Q8WYA1 636 aa13.99□□□□□ -0.17
SMC6-201ENST00000351948 PCDH18Q9HCL0 1135 aa13.99□□□□□ -0.17
SMC6-201ENST00000351948 RGS18Q9NS28 235 aa13.99□□□□□ -0.17
SMC6-201ENST00000351948 CFAP97Q9P2B7 532 aa13.99□□□□□ -0.17
SMC6-201ENST00000351948 ANGPTL2Q9UKU9 493 aa13.99□□□□□ -0.17
SMC6-201ENST00000351948 DAB1O75553 588 aa13.99□□□□□ -0.17
SMC6-201ENST00000351948 MYBL2P10244 700 aa13.99□□□□□ -0.17
SMC6-201ENST00000351948 LAG3P18627 525 aa13.99□□□□□ -0.17
SMC6-201ENST00000351948 FMO4P31512 558 aa13.99□□□□□ -0.17
SMC6-201ENST00000351948 SLC25A52Q3SY17 297 aa13.99□□□□□ -0.17
SMC6-201ENST00000351948 KBTBD12Q3ZCT8 623 aa13.99□□□□□ -0.17
SMC6-201ENST00000351948 FBXL19Q6PCT2 694 aa13.99□□□□□ -0.17
SMC6-201ENST00000351948 OTOAQ7RTW8 1153 aa13.99□□□□□ -0.17
SMC6-201ENST00000351948 SCAMP5Q8TAC9 235 aa13.99□□□□□ -0.17
SMC6-201ENST00000351948 THTPAQ9BU02 230 aa13.99□□□□□ -0.17
SMC6-201ENST00000351948 ARVCFO00192 962 aa13.98□□□□□ -0.17
SMC6-201ENST00000351948 ATP5HO75947 161 aa13.98□□□□□ -0.17
SMC6-201ENST00000351948 CD48P09326 243 aa13.98□□□□□ -0.17
SMC6-201ENST00000351948 LRRC36Q1X8D7 754 aa13.98□□□□□ -0.17
SMC6-201ENST00000351948 GPR158Q5T848 1215 aa13.98□□□□□ -0.17
SMC6-201ENST00000351948 SERPINA13PQ6UXR4 307 aa13.98□□□□□ -0.17
SMC6-201ENST00000351948 MYOCQ99972 504 aa13.98□□□□□ -0.17
SMC6-201ENST00000351948 SPATA16Q9BXB7 569 aa13.98□□□□□ -0.17
SMC6-201ENST00000351948 ILKAPQ9H0C8 392 aaPredicted RBP13.98□□□□□ -0.17
SMC6-201ENST00000351948 ERVK-5Q9HDB9 667 aa13.98□□□□□ -0.17
SMC6-201ENST00000351948 SPASTQ9UBP0 616 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms