RNA–Protein interactions for RNA: ENST00000348513.10

SMARCE1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCE1, Length 5,840 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-202ENST00000348513 ENTPD5O75356 428 aa11.31□□□□□ -0.6
SMARCE1-202ENST00000348513 PCNAP12004 261 aa11.31□□□□□ -0.6
SMARCE1-202ENST00000348513 NCF1P14598 390 aaPredicted RBP11.31□□□□□ -0.6
SMARCE1-202ENST00000348513 TRIM23P36406 574 aa11.31□□□□□ -0.6
SMARCE1-202ENST00000348513 RASA2Q15283 850 aa11.31□□□□□ -0.6
SMARCE1-202ENST00000348513 UGP2Q16851 508 aa11.31□□□□□ -0.6
SMARCE1-202ENST00000348513 TBC1D19Q8N5T2 526 aa11.31□□□□□ -0.6
SMARCE1-202ENST00000348513 GMCL1P1Q8NEA9 526 aa11.31□□□□□ -0.6
SMARCE1-202ENST00000348513 OR8H1Q8NGG4 311 aa11.31□□□□□ -0.6
SMARCE1-202ENST00000348513 TPCN2Q8NHX9 752 aa11.31□□□□□ -0.6
SMARCE1-202ENST00000348513 ANKS1AQ92625 1134 aa11.31□□□□□ -0.6
SMARCE1-202ENST00000348513 HTRA1Q92743 480 aa11.31□□□□□ -0.6
SMARCE1-202ENST00000348513 ERLEC1Q96DZ1 483 aa11.31□□□□□ -0.6
SMARCE1-202ENST00000348513 SEMA6BQ9H3T3 888 aa11.31□□□□□ -0.6
SMARCE1-202ENST00000348513 FANCFQ9NPI8 374 aa11.31□□□□□ -0.6
SMARCE1-202ENST00000348513 ILVBLA1L0T0 632 aa11.31□□□□□ -0.6
SMARCE1-202ENST00000348513 MAP3K13O43283 966 aa11.31□□□□□ -0.6
SMARCE1-202ENST00000348513 TMCC2O75069 709 aa11.31□□□□□ -0.6
SMARCE1-202ENST00000348513 RALBP11234 206 aa11.31□□□□□ -0.6
SMARCE1-202ENST00000348513 AKAP5P24588 427 aa11.31□□□□□ -0.6
SMARCE1-202ENST00000348513 SPRP35270 261 aaPredicted RBP11.31□□□□□ -0.6
SMARCE1-202ENST00000348513 RHBDL3P58872 404 aa11.31□□□□□ -0.6
SMARCE1-202ENST00000348513 TGFB2P61812 414 aa11.31□□□□□ -0.6
SMARCE1-202ENST00000348513 PABPC1LQ4VXU2 614 aaKnown RBP11.31□□□□□ -0.6
SMARCE1-202ENST00000348513 CCDC36Q8IYA8 594 aa11.31□□□□□ -0.6
SMARCE1-202ENST00000348513 STARD7Q9NQZ5 370 aa11.31□□□□□ -0.6
SMARCE1-202ENST00000348513 SNTG2Q9NY99 539 aa11.31□□□□□ -0.6
SMARCE1-202ENST00000348513 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.31□□□□□ -0.6
SMARCE1-202ENST00000348513 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.31□□□□□ -0.6
SMARCE1-202ENST00000348513 KRT87PA6NCN2 255 aa11.31□□□□□ -0.6
SMARCE1-202ENST00000348513 KLHL18O94889 574 aa11.31□□□□□ -0.6
SMARCE1-202ENST00000348513 ARIH2O95376 493 aa11.31□□□□□ -0.6
SMARCE1-202ENST00000348513 IFI30P13284 250 aa11.31□□□□□ -0.6
SMARCE1-202ENST00000348513 PBLDP30039 288 aaPredicted RBP11.31□□□□□ -0.6
SMARCE1-202ENST00000348513 SLC11A2P49281 568 aa11.31□□□□□ -0.6
SMARCE1-202ENST00000348513 MYL6P60660 151 aa11.31□□□□□ -0.6
SMARCE1-202ENST00000348513 LAMTOR4Q0VGL1 99 aa11.31□□□□□ -0.6
SMARCE1-202ENST00000348513 COX10Q12887 443 aa11.31□□□□□ -0.6
SMARCE1-202ENST00000348513 TTC39BQ5VTQ0 682 aaPredicted RBP11.31□□□□□ -0.6
SMARCE1-202ENST00000348513 ANO7Q6IWH7 933 aa11.31□□□□□ -0.6
SMARCE1-202ENST00000348513 MZT2BQ6NZ67 158 aa11.31□□□□□ -0.6
SMARCE1-202ENST00000348513 ZCCHC8Q6NZY4 707 aaKnown RBP11.31□□□□□ -0.6
SMARCE1-202ENST00000348513 SLC2A7Q6PXP3 512 aa11.31□□□□□ -0.6
SMARCE1-202ENST00000348513 BNIPLQ7Z465 357 aa11.31□□□□□ -0.6
SMARCE1-202ENST00000348513 SLC47A2Q86VL8 602 aa11.31□□□□□ -0.6
SMARCE1-202ENST00000348513 TRAPPC12Q8WVT3 735 aa11.31□□□□□ -0.6
SMARCE1-202ENST00000348513 DNAJB3Q8WWF6 145 aa11.31□□□□□ -0.6
SMARCE1-202ENST00000348513 KRT35Q92764 455 aa11.31□□□□□ -0.6
SMARCE1-202ENST00000348513 SRPK1Q96SB4 655 aaKnown RBP11.31□□□□□ -0.6
SMARCE1-202ENST00000348513 SPATC1LQ9H0A9 340 aa11.31□□□□□ -0.6
SMARCE1-202ENST00000348513 PABPC3Q9H361 631 aaKnown RBP11.31□□□□□ -0.6
SMARCE1-202ENST00000348513 EXOSC4Q9NPD3 245 aaKnown RBP11.31□□□□□ -0.6
SMARCE1-202ENST00000348513 ADAM30Q9UKF2 790 aa11.31□□□□□ -0.6
SMARCE1-202ENST00000348513 CBY1Q9Y3M2 126 aa11.31□□□□□ -0.6
SMARCE1-202ENST00000348513 A0A087X0T9 212 aa11.3□□□□□ -0.6
SMARCE1-202ENST00000348513 H3BNX3 289 aa11.3□□□□□ -0.6
SMARCE1-202ENST00000348513 CYP2C8P10632 490 aa11.3□□□□□ -0.6
SMARCE1-202ENST00000348513 EPB42P16452 691 aa11.3□□□□□ -0.6
SMARCE1-202ENST00000348513 SOAT1P35610 550 aa11.3□□□□□ -0.6
SMARCE1-202ENST00000348513 SLC29A2Q14542 456 aa11.3□□□□□ -0.6
SMARCE1-202ENST00000348513 PGM5Q15124 567 aa11.3□□□□□ -0.6
SMARCE1-202ENST00000348513 C4orf22Q6V702 233 aa11.3□□□□□ -0.6
SMARCE1-202ENST00000348513 DPF3Q92784 378 aa11.3□□□□□ -0.6
SMARCE1-202ENST00000348513 AAASQ9NRG9 546 aa11.3□□□□□ -0.6
SMARCE1-202ENST00000348513 SQORQ9Y6N5 450 aa11.3□□□□□ -0.6
SMARCE1-202ENST00000348513 CKMP06732 381 aa11.3□□□□□ -0.6
SMARCE1-202ENST00000348513 PTPN7P35236 360 aa11.3□□□□□ -0.6
SMARCE1-202ENST00000348513 AASDHQ4L235 1098 aaPredicted RBP11.3□□□□□ -0.6
SMARCE1-202ENST00000348513 GPR107Q5VW38 600 aa11.3□□□□□ -0.6
SMARCE1-202ENST00000348513 BNC2Q6ZN30 1099 aaPredicted RBP11.3□□□□□ -0.6
SMARCE1-202ENST00000348513 ZBTB49Q6ZSB9 765 aa11.3□□□□□ -0.6
SMARCE1-202ENST00000348513 FRMD7Q6ZUT3 714 aa11.3□□□□□ -0.6
SMARCE1-202ENST00000348513 SDR16C5Q8N3Y7 309 aa11.3□□□□□ -0.6
SMARCE1-202ENST00000348513 GMCL1Q96IK5 515 aa11.3□□□□□ -0.6
SMARCE1-202ENST00000348513 ZFYVE1Q9HBF4 777 aa11.3□□□□□ -0.6
SMARCE1-202ENST00000348513 VANGL2Q9ULK5 521 aa11.3□□□□□ -0.6
SMARCE1-202ENST00000348513 F5H5T6 163 aa11.3□□□□□ -0.6
SMARCE1-202ENST00000348513 SSX5O60225 188 aa11.3□□□□□ -0.6
SMARCE1-202ENST00000348513 PQBP1O60828 265 aaKnown RBP11.3□□□□□ -0.6
SMARCE1-202ENST00000348513 GPD2P43304 727 aa11.3□□□□□ -0.6
SMARCE1-202ENST00000348513 SERPINB9P50453 376 aa11.3□□□□□ -0.6
SMARCE1-202ENST00000348513 ERVK-24P63145 666 aa11.3□□□□□ -0.6
SMARCE1-202ENST00000348513 TBC1D25Q3MII6 688 aa11.3□□□□□ -0.6
SMARCE1-202ENST00000348513 PPIL6Q8IXY8 311 aa11.3□□□□□ -0.6
SMARCE1-202ENST00000348513 FAM172AQ8WUF8 416 aa11.3□□□□□ -0.6
SMARCE1-202ENST00000348513 SLC20A1Q8WUM9 679 aa11.3□□□□□ -0.6
SMARCE1-202ENST00000348513 PROX1Q92786 737 aa11.3□□□□□ -0.6
SMARCE1-202ENST00000348513 APOL2Q9BQE5 337 aa11.3□□□□□ -0.6
SMARCE1-202ENST00000348513 KCTD10Q9H3F6 313 aa11.3□□□□□ -0.6
SMARCE1-202ENST00000348513 C17orf75Q9HAS0 396 aa11.3□□□□□ -0.6
SMARCE1-202ENST00000348513 PNPLA3Q9NST1 481 aa11.3□□□□□ -0.6
SMARCE1-202ENST00000348513 TMEM161AQ9NX61 479 aa11.3□□□□□ -0.6
SMARCE1-202ENST00000348513 NUP50Q9UKX7 468 aa11.3□□□□□ -0.6
SMARCE1-202ENST00000348513 PDPK1O15530 556 aa11.3□□□□□ -0.6
SMARCE1-202ENST00000348513 PRLRP16471 622 aa11.3□□□□□ -0.6
SMARCE1-202ENST00000348513 SHMT1P34896 483 aa11.3□□□□□ -0.6
SMARCE1-202ENST00000348513 FXNQ16595 210 aa11.3□□□□□ -0.6
SMARCE1-202ENST00000348513 GALNT18Q6P9A2 607 aa11.3□□□□□ -0.6
SMARCE1-202ENST00000348513 ERI1Q8IV48 349 aaKnown RBP11.3□□□□□ -0.6
SMARCE1-202ENST00000348513 EMC1Q8N766 993 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms