RNA–Protein interactions for RNA: ENST00000347617.10

HMGA1-202, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,773 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-202ENST00000347617 CAPN8A6NHC0 703 aa16.26■□□□□ 0.19
HMGA1-202ENST00000347617 CXorf49A8MYA2 514 aaPredicted RBP16.26■□□□□ 0.19
HMGA1-202ENST00000347617 H7C0C1 242 aa16.26■□□□□ 0.19
HMGA1-202ENST00000347617 CYB561D2O14569 222 aa16.26■□□□□ 0.19
HMGA1-202ENST00000347617 DUSP11O75319 330 aaKnown RBP16.26■□□□□ 0.19
HMGA1-202ENST00000347617 H2AFYO75367 372 aaKnown RBP16.26■□□□□ 0.19
HMGA1-202ENST00000347617 TRMUO75648 421 aaKnown RBP16.26■□□□□ 0.19
HMGA1-202ENST00000347617 PDE5AO76074 875 aa16.26■□□□□ 0.19
HMGA1-202ENST00000347617 GJB1P08034 283 aa16.26■□□□□ 0.19
HMGA1-202ENST00000347617 SRGAP2BP0DMP2 458 aa16.26■□□□□ 0.19
HMGA1-202ENST00000347617 THRAP10827 490 aa16.26■□□□□ 0.19
HMGA1-202ENST00000347617 AKR1A1P14550 325 aa16.26■□□□□ 0.19
HMGA1-202ENST00000347617 IL1R2P27930 398 aa16.26■□□□□ 0.19
HMGA1-202ENST00000347617 MAGEA3P43357 314 aa16.26■□□□□ 0.19
HMGA1-202ENST00000347617 ATP5OP48047 213 aa16.26■□□□□ 0.19
HMGA1-202ENST00000347617 ACADVLP49748 655 aa16.26■□□□□ 0.19
HMGA1-202ENST00000347617 NOGQ13253 232 aa16.26■□□□□ 0.19
HMGA1-202ENST00000347617 CCL14Q16627 93 aa16.26■□□□□ 0.19
HMGA1-202ENST00000347617 DHRS4L2Q6PKH6 230 aa16.26■□□□□ 0.19
HMGA1-202ENST00000347617 ZBTB33Q86T24 672 aa16.26■□□□□ 0.19
HMGA1-202ENST00000347617 ZFP28Q8NHY6 868 aa16.26■□□□□ 0.19
HMGA1-202ENST00000347617 SREK1Q8WXA9 508 aaKnown RBP16.26■□□□□ 0.19
HMGA1-202ENST00000347617 EBNA1BP2Q99848 306 aaKnown RBP16.26■□□□□ 0.19
HMGA1-202ENST00000347617 C20orf27Q9GZN8 174 aa16.26■□□□□ 0.19
HMGA1-202ENST00000347617 SENP6Q9GZR1 1112 aaPredicted RBP16.26■□□□□ 0.19
HMGA1-202ENST00000347617 CDT1Q9H211 546 aa16.26■□□□□ 0.19
HMGA1-202ENST00000347617 ASB7Q9H672 318 aa16.26■□□□□ 0.19
HMGA1-202ENST00000347617 ZNHIT2Q9UHR6 403 aa16.26■□□□□ 0.19
HMGA1-202ENST00000347617 PLIN3O60664 434 aa16.26■□□□□ 0.19
HMGA1-202ENST00000347617 IQCF3P0C7M6 154 aa16.26■□□□□ 0.19
HMGA1-202ENST00000347617 CSH1P0DML2 217 aa16.26■□□□□ 0.19
HMGA1-202ENST00000347617 CSH2P0DML3 217 aa16.26■□□□□ 0.19
HMGA1-202ENST00000347617 SMIM10L2AP0DMW4 78 aa16.26■□□□□ 0.19
HMGA1-202ENST00000347617 SMIM10L2BP0DMW5 78 aa16.26■□□□□ 0.19
HMGA1-202ENST00000347617 MX2P20592 715 aa16.26■□□□□ 0.19
HMGA1-202ENST00000347617 TRPC3Q13507 836 aa16.26■□□□□ 0.19
HMGA1-202ENST00000347617 MFSD10Q14728 455 aa16.26■□□□□ 0.19
HMGA1-202ENST00000347617 PDK2Q15119 407 aa16.26■□□□□ 0.19
HMGA1-202ENST00000347617 MYLK3Q32MK0 819 aa16.26■□□□□ 0.19
HMGA1-202ENST00000347617 UNC5AQ6ZN44 842 aa16.26■□□□□ 0.19
HMGA1-202ENST00000347617 CAND1Q86VP6 1230 aaKnown RBP16.26■□□□□ 0.19
HMGA1-202ENST00000347617 ADGRF2Q8IZF7 708 aa16.26■□□□□ 0.19
HMGA1-202ENST00000347617 WDTC1Q8N5D0 677 aa16.26■□□□□ 0.19
HMGA1-202ENST00000347617 METTL25Q8N6Q8 603 aa16.26■□□□□ 0.19
HMGA1-202ENST00000347617 ARFGAP1Q8N6T3 406 aa16.26■□□□□ 0.19
HMGA1-202ENST00000347617 DEPDC1BQ8WUY9 529 aa16.26■□□□□ 0.19
HMGA1-202ENST00000347617 RSPH1Q8WYR4 309 aa16.26■□□□□ 0.19
HMGA1-202ENST00000347617 CDKL2Q92772 493 aa16.26■□□□□ 0.19
HMGA1-202ENST00000347617 ZNF778Q96MU6 729 aa16.26■□□□□ 0.19
HMGA1-202ENST00000347617 C10orf88Q9H8K7 445 aa16.26■□□□□ 0.19
HMGA1-202ENST00000347617 HACD3Q9P035 362 aa16.26■□□□□ 0.19
HMGA1-202ENST00000347617 STK10O94804 968 aaKnown RBP16.25■□□□□ 0.19
HMGA1-202ENST00000347617 FBXO21O94952 628 aa16.25■□□□□ 0.19
HMGA1-202ENST00000347617 IDO1P14902 403 aa16.25■□□□□ 0.19
HMGA1-202ENST00000347617 SSTR3P32745 418 aaPredicted RBP16.25■□□□□ 0.19
HMGA1-202ENST00000347617 TNFSF9P41273 254 aa16.25■□□□□ 0.19
HMGA1-202ENST00000347617 NUMBP49757 651 aa16.25■□□□□ 0.19
HMGA1-202ENST00000347617 PSEN2P49810 448 aa16.25■□□□□ 0.19
HMGA1-202ENST00000347617 SCNN1BP51168 640 aa16.25■□□□□ 0.19
HMGA1-202ENST00000347617 ABCE1P61221 599 aaKnown RBP16.25■□□□□ 0.19
HMGA1-202ENST00000347617 SPIDRQ14159 915 aa16.25■□□□□ 0.19
HMGA1-202ENST00000347617 SMTNL2Q2TAL5 461 aa16.25■□□□□ 0.19
HMGA1-202ENST00000347617 MFSD14CQ5VZR4 134 aa16.25■□□□□ 0.19
HMGA1-202ENST00000347617 STEAP4Q687X5 459 aa16.25■□□□□ 0.19
HMGA1-202ENST00000347617 NT5DC4Q86YG4 428 aa16.25■□□□□ 0.19
HMGA1-202ENST00000347617 HPS6Q86YV9 775 aa16.25■□□□□ 0.19
HMGA1-202ENST00000347617 POU5F2Q8N7G0 328 aa16.25■□□□□ 0.19
HMGA1-202ENST00000347617 OR5B17Q8NGF7 314 aa16.25■□□□□ 0.19
HMGA1-202ENST00000347617 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.25■□□□□ 0.19
HMGA1-202ENST00000347617 TFB1MQ8WVM0 346 aaKnown RBP16.25■□□□□ 0.19
HMGA1-202ENST00000347617 NLRP7Q8WX94 980 aa16.25■□□□□ 0.19
HMGA1-202ENST00000347617 CCDC124Q96CT7 223 aaKnown RBP16.25■□□□□ 0.19
HMGA1-202ENST00000347617 ADAMTS10Q9H324 1103 aa16.25■□□□□ 0.19
HMGA1-202ENST00000347617 ZNF395Q9H8N7 513 aaPredicted RBP16.25■□□□□ 0.19
HMGA1-202ENST00000347617 RPF1Q9H9Y2 349 aaKnown RBP16.25■□□□□ 0.19
HMGA1-202ENST00000347617 SMYD2Q9NRG4 433 aa16.25■□□□□ 0.19
HMGA1-202ENST00000347617 CISHQ9NSE2 258 aa16.25■□□□□ 0.19
HMGA1-202ENST00000347617 SETD4Q9NVD3 440 aa16.25■□□□□ 0.19
HMGA1-202ENST00000347617 SH3GLB1Q9Y371 365 aa16.25■□□□□ 0.19
HMGA1-202ENST00000347617 PCDHGA4Q9Y5G9 962 aa16.25■□□□□ 0.19
HMGA1-202ENST00000347617 ZNF487B1APH4 448 aa16.24■□□□□ 0.19
HMGA1-202ENST00000347617 TMEM114B3SHH9 223 aa16.24■□□□□ 0.19
HMGA1-202ENST00000347617 GPR25O00155 361 aa16.24■□□□□ 0.19
HMGA1-202ENST00000347617 B4GALT5O43286 388 aa16.24■□□□□ 0.19
HMGA1-202ENST00000347617 VTNP04004 478 aa16.24■□□□□ 0.19
HMGA1-202ENST00000347617 MIPP30301 263 aa16.24■□□□□ 0.19
HMGA1-202ENST00000347617 HOXC8P31273 242 aa16.24■□□□□ 0.19
HMGA1-202ENST00000347617 CDK9P50750 372 aaKnown RBP16.24■□□□□ 0.19
HMGA1-202ENST00000347617 EMP3P54852 163 aa16.24■□□□□ 0.19
HMGA1-202ENST00000347617 PSMC1P62191 440 aaKnown RBP16.24■□□□□ 0.19
HMGA1-202ENST00000347617 PPIDQ08752 370 aaKnown RBP16.24■□□□□ 0.19
HMGA1-202ENST00000347617 KLF10Q13118 480 aa16.24■□□□□ 0.19
HMGA1-202ENST00000347617 BMPR2Q13873 1038 aa16.24■□□□□ 0.19
HMGA1-202ENST00000347617 HERC3Q15034 1050 aa16.24■□□□□ 0.19
HMGA1-202ENST00000347617 TMEM132AQ24JP5 1023 aa16.24■□□□□ 0.19
HMGA1-202ENST00000347617 CCDC153Q494R4 210 aa16.24■□□□□ 0.19
HMGA1-202ENST00000347617 EEF1DP3Q658K8 133 aa16.24■□□□□ 0.19
HMGA1-202ENST00000347617 CDKL3Q8IVW4 592 aaPredicted RBP16.24■□□□□ 0.19
HMGA1-202ENST00000347617 TAB3Q8N5C8 712 aaPredicted RBP16.24■□□□□ 0.19
HMGA1-202ENST00000347617 CNDP1Q96KN2 507 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms