RNA–Protein interactions for RNA: ENST00000345009.8

SNCA-202, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 1,096 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-202ENST00000345009 RPS9P46781 194 aaKnown RBP12.2□□□□□ -0.46
SNCA-202ENST00000345009 HADHBP55084 474 aaKnown RBP12.2□□□□□ -0.46
SNCA-202ENST00000345009 DMC1Q14565 340 aa12.2□□□□□ -0.46
SNCA-202ENST00000345009 EIF4HQ15056 248 aaKnown RBP12.2□□□□□ -0.46
SNCA-202ENST00000345009 GAB4Q2WGN9 574 aa12.2□□□□□ -0.46
SNCA-202ENST00000345009 C5orf22Q49AR2 442 aa12.2□□□□□ -0.46
SNCA-202ENST00000345009 C6orf118Q5T5N4 469 aa12.2□□□□□ -0.46
SNCA-202ENST00000345009 SDE2Q6IQ49 451 aa12.2□□□□□ -0.46
SNCA-202ENST00000345009 RWDD4Q6NW29 188 aaKnown RBP12.2□□□□□ -0.46
SNCA-202ENST00000345009 TRMT11Q7Z4G4 463 aaKnown RBP12.2□□□□□ -0.46
SNCA-202ENST00000345009 ANKS1BQ7Z6G8 1248 aa12.2□□□□□ -0.46
SNCA-202ENST00000345009 MAP7D3Q8IWC1 876 aa12.2□□□□□ -0.46
SNCA-202ENST00000345009 CFAP52Q8N1V2 620 aa12.2□□□□□ -0.46
SNCA-202ENST00000345009 CCDC185Q8N715 623 aa12.2□□□□□ -0.46
SNCA-202ENST00000345009 WFIKKN2Q8TEU8 576 aa12.2□□□□□ -0.46
SNCA-202ENST00000345009 TEKT4Q8WW24 435 aa12.2□□□□□ -0.46
SNCA-202ENST00000345009 CLDN23Q96B33 292 aa12.2□□□□□ -0.46
SNCA-202ENST00000345009 TBC1D31Q96DN5 1066 aa12.2□□□□□ -0.46
SNCA-202ENST00000345009 ZYG11BQ9C0D3 744 aa12.2□□□□□ -0.46
SNCA-202ENST00000345009 CATSPERBQ9H7T0 1116 aa12.2□□□□□ -0.46
SNCA-202ENST00000345009 OSGEPQ9NPF4 335 aa12.2□□□□□ -0.46
SNCA-202ENST00000345009 KIF26AQ9ULI4 1882 aaPredicted RBP12.19□□□□□ -0.46
SNCA-202ENST00000345009 IGLV3-10A0A075B6K4 115 aa12.19□□□□□ -0.46
SNCA-202ENST00000345009 DRGXA6NNA5 263 aa12.19□□□□□ -0.46
SNCA-202ENST00000345009 TMEM110-MUSTN1A8MSY1 372 aa12.19□□□□□ -0.46
SNCA-202ENST00000345009 BTNL10A8MVZ5 291 aa12.19□□□□□ -0.46
SNCA-202ENST00000345009 NPC1O15118 1278 aa12.19□□□□□ -0.46
SNCA-202ENST00000345009 FGF10O15520 208 aaPredicted RBP12.19□□□□□ -0.46
SNCA-202ENST00000345009 PJA2O43164 708 aa12.19□□□□□ -0.46
SNCA-202ENST00000345009 DAPK3O43293 454 aa12.19□□□□□ -0.46
SNCA-202ENST00000345009 KRT86O43790 486 aa12.19□□□□□ -0.46
SNCA-202ENST00000345009 CREB3O43889 395 aa12.19□□□□□ -0.46
SNCA-202ENST00000345009 ATP5BP06576 529 aaKnown RBP12.19□□□□□ -0.46
SNCA-202ENST00000345009 CCDC175P0C221 793 aa12.19□□□□□ -0.46
SNCA-202ENST00000345009 CISD3P0C7P0 127 aa12.19□□□□□ -0.46
SNCA-202ENST00000345009 CHRNB1P11230 501 aa12.19□□□□□ -0.46
SNCA-202ENST00000345009 TARSP26639 723 aaKnown RBP12.19□□□□□ -0.46
SNCA-202ENST00000345009 EPHB2P29323 1055 aa12.19□□□□□ -0.46
SNCA-202ENST00000345009 OR1E1P30953 314 aa12.19□□□□□ -0.46
SNCA-202ENST00000345009 ETFBP38117 255 aa12.19□□□□□ -0.46
SNCA-202ENST00000345009 ARL4AP40617 200 aa12.19□□□□□ -0.46
SNCA-202ENST00000345009 MRPS21P82921 87 aaKnown RBP12.19□□□□□ -0.46
SNCA-202ENST00000345009 KDSRQ06136 332 aa12.19□□□□□ -0.46
SNCA-202ENST00000345009 ZNF252P-AS1Q0IIN9 211 aa12.19□□□□□ -0.46
SNCA-202ENST00000345009 CCINQ13939 588 aa12.19□□□□□ -0.46
SNCA-202ENST00000345009 HSF5Q4G112 596 aaPredicted RBP12.19□□□□□ -0.46
SNCA-202ENST00000345009 ZFYVE27Q5T4F4 411 aa12.19□□□□□ -0.46
SNCA-202ENST00000345009 FSTL4Q6MZW2 842 aa12.19□□□□□ -0.46
SNCA-202ENST00000345009 SETD3Q86TU7 594 aaPredicted RBP12.19□□□□□ -0.46
SNCA-202ENST00000345009 C12orf40Q86WS4 652 aa12.19□□□□□ -0.46
SNCA-202ENST00000345009 AHI1Q8N157 1196 aa12.19□□□□□ -0.46
SNCA-202ENST00000345009 CCAR2Q8N163 923 aaKnown RBP12.19□□□□□ -0.46
SNCA-202ENST00000345009 TERB1Q8NA31 727 aa12.19□□□□□ -0.46
SNCA-202ENST00000345009 IGSF8Q969P0 613 aa12.19□□□□□ -0.46
SNCA-202ENST00000345009 BTBD6Q96KE9 485 aa12.19□□□□□ -0.46
SNCA-202ENST00000345009 PRICKLE1Q96MT3 831 aaPredicted RBP12.19□□□□□ -0.46
SNCA-202ENST00000345009 DHX35Q9H5Z1 703 aaKnown RBP12.19□□□□□ -0.46
SNCA-202ENST00000345009 ZWILCHQ9H900 591 aa12.19□□□□□ -0.46
SNCA-202ENST00000345009 ANLNQ9NQW6 1124 aa12.19□□□□□ -0.46
SNCA-202ENST00000345009 GGA2Q9UJY4 613 aa12.19□□□□□ -0.46
SNCA-202ENST00000345009 PLA2G4CQ9UP65 541 aa12.19□□□□□ -0.46
SNCA-202ENST00000345009 AP4E1Q9UPM8 1137 aa12.19□□□□□ -0.46
SNCA-202ENST00000345009 FAM86C2PA6NEL3 165 aa12.18□□□□□ -0.46
SNCA-202ENST00000345009 GPR37O15354 613 aa12.18□□□□□ -0.46
SNCA-202ENST00000345009 ZBTB24O43167 697 aaPredicted RBP12.18□□□□□ -0.46
SNCA-202ENST00000345009 SPOPO43791 374 aa12.18□□□□□ -0.46
SNCA-202ENST00000345009 LRIG2O94898 1065 aa12.18□□□□□ -0.46
SNCA-202ENST00000345009 PDGFBP01127 241 aaPredicted RBP12.18□□□□□ -0.46
SNCA-202ENST00000345009 EGFP01133 1207 aa12.18□□□□□ -0.46
SNCA-202ENST00000345009 PABPC1P11940 636 aaKnown RBP12.18□□□□□ -0.46
SNCA-202ENST00000345009 RHOQP17081 205 aa12.18□□□□□ -0.46
SNCA-202ENST00000345009 POLR2EP19388 210 aaKnown RBP12.18□□□□□ -0.46
SNCA-202ENST00000345009 MAPKAPK2P49137 400 aa12.18□□□□□ -0.46
SNCA-202ENST00000345009 TPI1P60174 286 aa12.18□□□□□ -0.46
SNCA-202ENST00000345009 SULT2A1Q06520 285 aa12.18□□□□□ -0.46
SNCA-202ENST00000345009 CCDC173Q0VFZ6 552 aa12.18□□□□□ -0.46
SNCA-202ENST00000345009 KRT81Q14533 505 aa12.18□□□□□ -0.46
SNCA-202ENST00000345009 RAB6CQ53S08 254 aa12.18□□□□□ -0.46
SNCA-202ENST00000345009 PPP6R3Q5H9R7 873 aaPredicted RBP12.18□□□□□ -0.46
SNCA-202ENST00000345009 LRRC38Q5VT99 294 aa12.18□□□□□ -0.46
SNCA-202ENST00000345009 RNF43Q68DV7 783 aa12.18□□□□□ -0.46
SNCA-202ENST00000345009 ZNF783Q6ZMS7 281 aa12.18□□□□□ -0.46
SNCA-202ENST00000345009 C14orf80Q86SX3 495 aa12.18□□□□□ -0.46
SNCA-202ENST00000345009 DAAM2Q86T65 1068 aa12.18□□□□□ -0.46
SNCA-202ENST00000345009 CCDC105Q8IYK2 499 aa12.18□□□□□ -0.46
SNCA-202ENST00000345009 SYCE1Q8N0S2 351 aa12.18□□□□□ -0.46
SNCA-202ENST00000345009 RNF10Q8N5U6 811 aaKnown RBP12.18□□□□□ -0.46
SNCA-202ENST00000345009 ARFGAP1Q8N6T3 406 aa12.18□□□□□ -0.46
SNCA-202ENST00000345009 KCTD6Q8NC69 237 aa12.18□□□□□ -0.46
SNCA-202ENST00000345009 ACRBPQ8NEB7 543 aa12.18□□□□□ -0.46
SNCA-202ENST00000345009 UBE2Q2Q8WVN8 375 aa12.18□□□□□ -0.46
SNCA-202ENST00000345009 ACDQ96AP0 544 aa12.18□□□□□ -0.46
SNCA-202ENST00000345009 PDLIM2Q96JY6 352 aa12.18□□□□□ -0.46
SNCA-202ENST00000345009 CIPCQ9C0C6 399 aa12.18□□□□□ -0.46
SNCA-202ENST00000345009 RAB6CQ9H0N0 254 aa12.18□□□□□ -0.46
SNCA-202ENST00000345009 FBRSL1Q9HCM7 1045 aaKnown RBP12.18□□□□□ -0.46
SNCA-202ENST00000345009 TMPRSS4Q9NRS4 437 aa12.18□□□□□ -0.46
SNCA-202ENST00000345009 ABCB8Q9NUT2 735 aa12.18□□□□□ -0.46
SNCA-202ENST00000345009 ELOVL2Q9NXB9 296 aa12.18□□□□□ -0.46
SNCA-202ENST00000345009 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms