RNA–Protein interactions for RNA: ENST00000344550.4

CEACAM3-201, Transcript of carcinoembryonic antigen related cell adhesion molecule 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CEACAM3, Length 1,022 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3-201ENST00000344550 NNMTP40261 264 aa20.68■□□□□ 0.9
CEACAM3-201ENST00000344550 NOMO3P69849 1222 aa20.68■□□□□ 0.9
CEACAM3-201ENST00000344550 ECT2LQ008S8 904 aa20.68■□□□□ 0.9
CEACAM3-201ENST00000344550 AUHQ13825 339 aaKnown RBP20.68■□□□□ 0.9
CEACAM3-201ENST00000344550 TTC31Q49AM3 519 aaPredicted RBP20.68■□□□□ 0.9
CEACAM3-201ENST00000344550 FSCBQ5H9T9 825 aa20.68■□□□□ 0.9
CEACAM3-201ENST00000344550 FBXL22Q6P050 247 aa20.68■□□□□ 0.9
CEACAM3-201ENST00000344550 USP30Q70CQ3 517 aa20.68■□□□□ 0.9
CEACAM3-201ENST00000344550 ARMCX6Q7L4S7 300 aa20.68■□□□□ 0.9
CEACAM3-201ENST00000344550 CCAR2Q8N163 923 aaKnown RBP20.68■□□□□ 0.9
CEACAM3-201ENST00000344550 MYO19Q96H55 970 aa20.68■□□□□ 0.9
CEACAM3-201ENST00000344550 ZDHHC5Q9C0B5 715 aa20.68■□□□□ 0.9
CEACAM3-201ENST00000344550 RSPH9Q9H1X1 276 aaPredicted RBP20.68■□□□□ 0.9
CEACAM3-201ENST00000344550 ARHGEF38Q9NXL2 777 aa20.68■□□□□ 0.9
CEACAM3-201ENST00000344550 LAMA1P25391 3075 aa20.67■□□□□ 0.9
CEACAM3-201ENST00000344550 MUC22E2RYF6 1773 aaPredicted RBP20.67■□□□□ 0.9
CEACAM3-201ENST00000344550 C4orf47A7E2U8 309 aa20.67■□□□□ 0.9
CEACAM3-201ENST00000344550 METTL12A8MUP2 240 aa20.67■□□□□ 0.9
CEACAM3-201ENST00000344550 UPK3BL1B0FP48 263 aa20.67■□□□□ 0.9
CEACAM3-201ENST00000344550 PATE3B3GLJ2 98 aa20.67■□□□□ 0.9
CEACAM3-201ENST00000344550 UPK3BL2E5RIL1 263 aa20.67■□□□□ 0.9
CEACAM3-201ENST00000344550 CYP1A1P04798 512 aaPredicted RBP20.67■□□□□ 0.9
CEACAM3-201ENST00000344550 HLA-EP13747 358 aa20.67■□□□□ 0.9
CEACAM3-201ENST00000344550 CSRP1P21291 193 aaKnown RBP20.67■□□□□ 0.9
CEACAM3-201ENST00000344550 NME3Q13232 169 aa20.67■□□□□ 0.9
CEACAM3-201ENST00000344550 NCAPHQ15003 741 aa20.67■□□□□ 0.9
CEACAM3-201ENST00000344550 SYCP1Q15431 976 aa20.67■□□□□ 0.9
CEACAM3-201ENST00000344550 FAM102AQ5T9C2 384 aaPredicted RBP20.67■□□□□ 0.9
CEACAM3-201ENST00000344550 RNF219Q5W0B1 726 aaPredicted RBP20.67■□□□□ 0.9
CEACAM3-201ENST00000344550 ZNF776Q68DI1 518 aaPredicted RBP20.67■□□□□ 0.9
CEACAM3-201ENST00000344550 NEK11Q8NG66 645 aa20.67■□□□□ 0.9
CEACAM3-201ENST00000344550 MRGPRX3Q96LB0 322 aa20.67■□□□□ 0.9
CEACAM3-201ENST00000344550 RPRD1AQ96P16 312 aaPredicted RBP20.67■□□□□ 0.9
CEACAM3-201ENST00000344550 TMEM59LQ9UK28 342 aa20.67■□□□□ 0.9
CEACAM3-201ENST00000344550 ERVW-1Q9UQF0 538 aa20.67■□□□□ 0.9
CEACAM3-201ENST00000344550 CEP192Q8TEP8 1941 aa20.66■□□□□ 0.9
CEACAM3-201ENST00000344550 EDDM13A0A1B0GTR0 161 aa20.66■□□□□ 0.9
CEACAM3-201ENST00000344550 PAGE1O75459 146 aa20.66■□□□□ 0.9
CEACAM3-201ENST00000344550 GFPT2O94808 682 aa20.66■□□□□ 0.9
CEACAM3-201ENST00000344550 DNTTP04053 509 aa20.66■□□□□ 0.9
CEACAM3-201ENST00000344550 MMEP08473 750 aa20.66■□□□□ 0.9
CEACAM3-201ENST00000344550 CCDC172P0C7W6 258 aa20.66■□□□□ 0.9
CEACAM3-201ENST00000344550 ENGP17813 658 aa20.66■□□□□ 0.9
CEACAM3-201ENST00000344550 MMP8P22894 467 aa20.66■□□□□ 0.9
CEACAM3-201ENST00000344550 RPS14P62263 151 aaKnown RBP20.66■□□□□ 0.9
CEACAM3-201ENST00000344550 UBXN1Q04323 297 aa20.66■□□□□ 0.9
CEACAM3-201ENST00000344550 TYRO3Q06418 890 aa20.66■□□□□ 0.9
CEACAM3-201ENST00000344550 TAF3Q5VWG9 929 aa20.66■□□□□ 0.9
CEACAM3-201ENST00000344550 BNIPLQ7Z465 357 aa20.66■□□□□ 0.9
CEACAM3-201ENST00000344550 HAPLN3Q96S86 360 aa20.66■□□□□ 0.9
CEACAM3-201ENST00000344550 GPR174Q9BXC1 333 aa20.66■□□□□ 0.9
CEACAM3-201ENST00000344550 RETREG1Q9H6L5 497 aa20.66■□□□□ 0.9
CEACAM3-201ENST00000344550 SGK2Q9HBY8 427 aa20.66■□□□□ 0.9
CEACAM3-201ENST00000344550 PIGVQ9NUD9 493 aa20.66■□□□□ 0.9
CEACAM3-201ENST00000344550 TPX2Q9ULW0 747 aaKnown RBP20.66■□□□□ 0.9
CEACAM3-201ENST00000344550 TBC1D30Q9Y2I9 924 aa20.66■□□□□ 0.9
CEACAM3-201ENST00000344550 HS3ST4Q9Y661 456 aa20.66■□□□□ 0.9
CEACAM3-201ENST00000344550 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP20.65■□□□□ 0.9
CEACAM3-201ENST00000344550 SMTNL1A8MU46 457 aa20.65■□□□□ 0.9
CEACAM3-201ENST00000344550 ARHGAP33O14559 1287 aa20.65■□□□□ 0.9
CEACAM3-201ENST00000344550 CFIP05156 583 aa20.65■□□□□ 0.9
CEACAM3-201ENST00000344550 ATXN3P54252 364 aaPredicted RBP20.65■□□□□ 0.9
CEACAM3-201ENST00000344550 CDH4P55283 916 aa20.65■□□□□ 0.9
CEACAM3-201ENST00000344550 DEUP1Q05D60 604 aa20.65■□□□□ 0.9
CEACAM3-201ENST00000344550 ZNF177Q13360 481 aaPredicted RBP20.65■□□□□ 0.9
CEACAM3-201ENST00000344550 LRRC31Q6UY01 552 aa20.65■□□□□ 0.9
CEACAM3-201ENST00000344550 RGL4Q8IZJ4 473 aa20.65■□□□□ 0.9
CEACAM3-201ENST00000344550 BTBD1Q9H0C5 482 aa20.65■□□□□ 0.9
CEACAM3-201ENST00000344550 OSGEPQ9NPF4 335 aa20.65■□□□□ 0.9
CEACAM3-201ENST00000344550 MYO6Q9UM54 1294 aa20.65■□□□□ 0.9
CEACAM3-201ENST00000344550 NCKAP1Q9Y2A7 1128 aa20.65■□□□□ 0.9
CEACAM3-201ENST00000344550 CACNA1EQ15878 2313 aa20.65■□□□□ 0.9
CEACAM3-201ENST00000344550 SYNJ2BP-COX16A0A087WUM0 186 aa20.64■□□□□ 0.89
CEACAM3-201ENST00000344550 A0A1B0GTW7 788 aa20.64■□□□□ 0.89
CEACAM3-201ENST00000344550 MEI4A8MW99 385 aa20.64■□□□□ 0.89
CEACAM3-201ENST00000344550 ENDOD1O94919 500 aa20.64■□□□□ 0.89
CEACAM3-201ENST00000344550 CEACAM1P13688 526 aa20.64■□□□□ 0.89
CEACAM3-201ENST00000344550 SULT1E1P49888 294 aa20.64■□□□□ 0.89
CEACAM3-201ENST00000344550 GSCP56915 257 aaPredicted RBP20.64■□□□□ 0.89
CEACAM3-201ENST00000344550 RNASE9P60153 205 aaKnown RBP20.64■□□□□ 0.89
CEACAM3-201ENST00000344550 FMO1Q01740 532 aa20.64■□□□□ 0.89
CEACAM3-201ENST00000344550 SLC14A1Q13336 389 aa20.64■□□□□ 0.89
CEACAM3-201ENST00000344550 C9orf64Q5T6V5 341 aa20.64■□□□□ 0.89
CEACAM3-201ENST00000344550 OTUD1Q5VV17 481 aaPredicted RBP20.64■□□□□ 0.89
CEACAM3-201ENST00000344550 NAA35Q5VZE5 725 aa20.64■□□□□ 0.89
CEACAM3-201ENST00000344550 CXorf57Q6NSI4 855 aaKnown RBP20.64■□□□□ 0.89
CEACAM3-201ENST00000344550 APTXQ7Z2E3 356 aaKnown RBP20.64■□□□□ 0.89
CEACAM3-201ENST00000344550 CPA5Q8WXQ8 436 aa20.64■□□□□ 0.89
CEACAM3-201ENST00000344550 PCMTD1Q96MG8 357 aaPredicted RBP20.64■□□□□ 0.89
CEACAM3-201ENST00000344550 TKTL2Q9H0I9 626 aa20.64■□□□□ 0.89
CEACAM3-201ENST00000344550 HSD3B7Q9H2F3 369 aa20.64■□□□□ 0.89
CEACAM3-201ENST00000344550 NLRC4Q9NPP4 1024 aa20.64■□□□□ 0.89
CEACAM3-201ENST00000344550 CD93Q9NPY3 652 aa20.64■□□□□ 0.89
CEACAM3-201ENST00000344550 COX16Q9P0S2 106 aa20.64■□□□□ 0.89
CEACAM3-201ENST00000344550 VANGL2Q9ULK5 521 aa20.64■□□□□ 0.89
CEACAM3-201ENST00000344550 DRGXA6NNA5 263 aa20.63■□□□□ 0.89
CEACAM3-201ENST00000344550 KCNK5O95279 499 aa20.63■□□□□ 0.89
CEACAM3-201ENST00000344550 RDXP35241 583 aaKnown RBP20.63■□□□□ 0.89
CEACAM3-201ENST00000344550 ELAVL3Q14576 367 aaKnown RBP20.63■□□□□ 0.89
CEACAM3-201ENST00000344550 PPP1R2P3Q6NXS1 205 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms