RNA–Protein interactions for RNA: ENST00000344113.8

SYNE2-202, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE2, Length 21,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-202ENST00000344113 EFHC1Q5JVL4 640 aa3.84□□□□□ -1.8
SYNE2-202ENST00000344113 BROXQ5VW32 411 aa3.84□□□□□ -1.8
SYNE2-202ENST00000344113 ELMOD2Q8IZ81 293 aa3.84□□□□□ -1.8
SYNE2-202ENST00000344113 OR8H2Q8N162 312 aa3.84□□□□□ -1.8
SYNE2-202ENST00000344113 C18orf8Q96DM3 657 aa3.84□□□□□ -1.8
SYNE2-202ENST00000344113 ZNF641Q96N77 438 aaPredicted RBP3.84□□□□□ -1.8
SYNE2-202ENST00000344113 MARK1Q9P0L2 795 aa3.84□□□□□ -1.8
SYNE2-202ENST00000344113 TIE1P35590 1138 aa3.84□□□□□ -1.8
SYNE2-202ENST00000344113 RAB5CP51148 216 aa3.84□□□□□ -1.8
SYNE2-202ENST00000344113 ESCO2Q56NI9 601 aa3.84□□□□□ -1.8
SYNE2-202ENST00000344113 OR7A2PQ8NGA2 310 aa3.84□□□□□ -1.8
SYNE2-202ENST00000344113 SLC9A6Q92581 669 aa3.84□□□□□ -1.8
SYNE2-202ENST00000344113 NXNL1Q96CM4 212 aa3.84□□□□□ -1.8
SYNE2-202ENST00000344113 NMD3Q96D46 503 aaKnown RBP3.84□□□□□ -1.8
SYNE2-202ENST00000344113 WDR24Q96S15 920 aa3.84□□□□□ -1.8
SYNE2-202ENST00000344113 PI4K2AQ9BTU6 479 aa3.84□□□□□ -1.8
SYNE2-202ENST00000344113 CCDC8Q9H0W5 538 aaPredicted RBP3.84□□□□□ -1.8
SYNE2-202ENST00000344113 FARSAQ9Y285 508 aaKnown RBP3.84□□□□□ -1.8
SYNE2-202ENST00000344113 TESMINQ9Y4I5 508 aa3.84□□□□□ -1.8
SYNE2-202ENST00000344113 CNTFP26441 200 aa3.84□□□□□ -1.8
SYNE2-202ENST00000344113 SUPT20HL1Q3ZLR7 823 aa3.84□□□□□ -1.8
SYNE2-202ENST00000344113 MFSD6Q6ZSS7 791 aa3.84□□□□□ -1.8
SYNE2-202ENST00000344113 SRFBP1Q8NEF9 429 aaKnown RBP3.84□□□□□ -1.8
SYNE2-202ENST00000344113 SETD7Q8WTS6 366 aaKnown RBP3.84□□□□□ -1.8
SYNE2-202ENST00000344113 ASB12Q8WXK4 309 aa3.84□□□□□ -1.8
SYNE2-202ENST00000344113 CDKN2AIPNLQ96HQ2 116 aa3.84□□□□□ -1.8
SYNE2-202ENST00000344113 BTF3L4Q96K17 158 aa3.84□□□□□ -1.8
SYNE2-202ENST00000344113 BIN3Q9NQY0 253 aa3.84□□□□□ -1.8
SYNE2-202ENST00000344113 B3GNT2Q9NY97 397 aa3.84□□□□□ -1.8
SYNE2-202ENST00000344113 GSTK1Q9Y2Q3 226 aa3.84□□□□□ -1.8
SYNE2-202ENST00000344113 UTYO14607 1347 aa3.84□□□□□ -1.8
SYNE2-202ENST00000344113 FUOMA2VDF0 154 aa3.84□□□□□ -1.8
SYNE2-202ENST00000344113 GNPDA1P46926 289 aa3.84□□□□□ -1.8
SYNE2-202ENST00000344113 DUSP7Q16829 419 aa3.84□□□□□ -1.8
SYNE2-202ENST00000344113 FUT11Q495W5 492 aa3.84□□□□□ -1.8
SYNE2-202ENST00000344113 CERCAMQ5T4B2 595 aa3.84□□□□□ -1.8
SYNE2-202ENST00000344113 ALG1Q9BT22 464 aa3.84□□□□□ -1.8
SYNE2-202ENST00000344113 EXO5Q9H790 373 aa3.84□□□□□ -1.8
SYNE2-202ENST00000344113 C6orf50Q9HD87 102 aa3.84□□□□□ -1.8
SYNE2-202ENST00000344113 REXO2Q9Y3B8 237 aaKnown RBP3.84□□□□□ -1.8
SYNE2-202ENST00000344113 COPEO14579 308 aa3.83□□□□□ -1.8
SYNE2-202ENST00000344113 UQCRC1P31930 480 aa3.83□□□□□ -1.8
SYNE2-202ENST00000344113 TARDBPQ13148 414 aaKnown RBP eCLIP3.83□□□□□ -1.8
SYNE2-202ENST00000344113 RAPSNQ13702 412 aa3.83□□□□□ -1.8
SYNE2-202ENST00000344113 C1orf189Q5VU69 101 aa3.83□□□□□ -1.8
SYNE2-202ENST00000344113 AK8Q96MA6 479 aa3.83□□□□□ -1.8
SYNE2-202ENST00000344113 ERGIC2Q96RQ1 377 aa3.83□□□□□ -1.8
SYNE2-202ENST00000344113 TCF25Q9BQ70 676 aa3.83□□□□□ -1.8
SYNE2-202ENST00000344113 SYT15Q9BQS2 421 aa3.83□□□□□ -1.8
SYNE2-202ENST00000344113 RASSF1Q9NS23 344 aa3.83□□□□□ -1.8
SYNE2-202ENST00000344113 WASH4PA8MWX3 477 aa3.83□□□□□ -1.8
SYNE2-202ENST00000344113 PRSS44E7EML9 344 aa3.83□□□□□ -1.8
SYNE2-202ENST00000344113 AIREO43918 545 aa3.83□□□□□ -1.8
SYNE2-202ENST00000344113 VPS4BO75351 444 aa3.83□□□□□ -1.8
SYNE2-202ENST00000344113 OR7A10O76100 309 aa3.83□□□□□ -1.8
SYNE2-202ENST00000344113 UBL4AP11441 157 aa3.83□□□□□ -1.8
SYNE2-202ENST00000344113 RBM34P42696 430 aaKnown RBP3.83□□□□□ -1.8
SYNE2-202ENST00000344113 ZNF45Q02386 682 aa3.83□□□□□ -1.8
SYNE2-202ENST00000344113 BST2Q10589 180 aaKnown RBP3.83□□□□□ -1.8
SYNE2-202ENST00000344113 MAB21L1Q13394 359 aa3.83□□□□□ -1.8
SYNE2-202ENST00000344113 DGCR6Q14129 220 aa3.83□□□□□ -1.8
SYNE2-202ENST00000344113 CA9Q16790 459 aa3.83□□□□□ -1.8
SYNE2-202ENST00000344113 GPR158Q5T848 1215 aa3.83□□□□□ -1.8
SYNE2-202ENST00000344113 KBTBD2Q8IY47 623 aa3.83□□□□□ -1.8
SYNE2-202ENST00000344113 FANK1Q8TC84 345 aa3.83□□□□□ -1.8
SYNE2-202ENST00000344113 TNFRSF25Q93038 417 aa3.83□□□□□ -1.8
SYNE2-202ENST00000344113 VPS33AQ96AX1 596 aa3.83□□□□□ -1.8
SYNE2-202ENST00000344113 TCEAL4Q96EI5 215 aa3.83□□□□□ -1.8
SYNE2-202ENST00000344113 ELMO2Q96JJ3 720 aa3.83□□□□□ -1.8
SYNE2-202ENST00000344113 TMEM79Q9BSE2 394 aa3.83□□□□□ -1.8
SYNE2-202ENST00000344113 SLC22A4Q9H015 551 aa3.83□□□□□ -1.8
SYNE2-202ENST00000344113 WNT8AQ9H1J5 351 aa3.83□□□□□ -1.8
SYNE2-202ENST00000344113 RGS18Q9NS28 235 aa3.83□□□□□ -1.8
SYNE2-202ENST00000344113 KCNK4Q9NYG8 393 aa3.83□□□□□ -1.8
SYNE2-202ENST00000344113 VPS28Q9UK41 221 aa3.83□□□□□ -1.8
SYNE2-202ENST00000344113 TMEM210A6NLX4 147 aa3.83□□□□□ -1.8
SYNE2-202ENST00000344113 SULT1C4O75897 302 aa3.83□□□□□ -1.8
SYNE2-202ENST00000344113 GSTT2P0CG29 244 aa3.83□□□□□ -1.8
SYNE2-202ENST00000344113 GSTT2BP0CG30 244 aa3.83□□□□□ -1.8
SYNE2-202ENST00000344113 PRKAR2AP13861 404 aaKnown RBP3.83□□□□□ -1.8
SYNE2-202ENST00000344113 ANPEPP15144 967 aa3.83□□□□□ -1.8
SYNE2-202ENST00000344113 FAM98BQ52LJ0 330 aaKnown RBP3.83□□□□□ -1.8
SYNE2-202ENST00000344113 ASCC1Q8N9N2 400 aaKnown RBP3.83□□□□□ -1.8
SYNE2-202ENST00000344113 SLC22A8Q8TCC7 542 aa3.83□□□□□ -1.8
SYNE2-202ENST00000344113 PMM1Q92871 262 aa3.83□□□□□ -1.8
SYNE2-202ENST00000344113 KAZALD1Q96I82 304 aa3.83□□□□□ -1.8
SYNE2-202ENST00000344113 DGCR6LQ9BY27 220 aa3.83□□□□□ -1.8
SYNE2-202ENST00000344113 AOC3Q16853 763 aa3.83□□□□□ -1.8
SYNE2-202ENST00000344113 LSM12Q3MHD2 195 aaKnown RBP3.83□□□□□ -1.8
SYNE2-202ENST00000344113 MCMDC2Q4G0Z9 681 aa3.83□□□□□ -1.8
SYNE2-202ENST00000344113 LARP4BQ92615 738 aaKnown RBP3.83□□□□□ -1.8
SYNE2-202ENST00000344113 KCNS3Q9BQ31 491 aa3.83□□□□□ -1.8
SYNE2-202ENST00000344113 KLF11O14901 512 aa3.83□□□□□ -1.8
SYNE2-202ENST00000344113 CCDC117Q8IWD4 279 aaPredicted RBP3.83□□□□□ -1.8
SYNE2-202ENST00000344113 KBTBD7Q8WVZ9 684 aa3.83□□□□□ -1.8
SYNE2-202ENST00000344113 ESR2Q92731 530 aa3.83□□□□□ -1.8
SYNE2-202ENST00000344113 MTMR8Q96EF0 704 aa3.83□□□□□ -1.8
SYNE2-202ENST00000344113 FAM129BQ96TA1 746 aa3.83□□□□□ -1.8
SYNE2-202ENST00000344113 GRIP2Q9C0E4 1043 aa3.83□□□□□ -1.8
SYNE2-202ENST00000344113 NUAK1O60285 661 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms